Nematolebias whitei (Rio pearlfish): 119428838
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Entry
119428838 CDS
T08042
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13
KO
K08331
autophagy-related protein 13
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04136
Autophagy - other
nwh04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119428838 (atg13)
04136 Autophagy - other
119428838 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119428838 (atg13)
03029 Mitochondrial biogenesis [BR:
nwh03029
]
119428838 (atg13)
Membrane trafficking [BR:
nwh04131
]
Autophagy
Autophagosome formation proteins
ULK complex
119428838 (atg13)
Atg1 complex
119428838 (atg13)
Mitochondrial biogenesis [BR:
nwh03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
119428838 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
119428838
NCBI-ProteinID:
XP_037552454
LinkDB
All DBs
Position
23:416753..422737
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AA seq
523 aa
AA seq
DB search
MDLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPEVT
HEAKKALAGQLPGVGRSMCVEISLKTSEGDSMELETWCLEMNEKCEKDIKVSYTVYNRLS
VLLKSLLAITRVTPAYKLSRNQGHDYVILYRIYFGEVQLGGLGEGFQTVRVGVVGTPIGT
VTLSCAYRVNLAFMSSRQFERTAPIMGIIVDHFVDPPCSSQRPANLGHPCIFRAREEEDG
GAFAGVQDSQEVCTTSFSTSPPSQCVCTLSPSPSKLSKPLPLDSLQLPLALGLVTHNLYA
SRLSYPPAASGAAAEFSNQVLHAGKEGGAPQPPHGAEVQLTVEHAANTPSSSGDEDVLLQ
SGEGRSLSPSDPVESLMAFRRKVGAFVNKPSTQVTAGSLDLPFAAFAPRGLDSEESDPMV
RPPDSPPCRSPLQVSLHSQGSDGSAPQDDFVMVDFRPAFSKDDLMPMDLGTFYREFQNPP
QLASLSLNASSQSMADDLDSLPEKLRAYEKNIDEFDAFVDTLQ
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagtccacaggacaagaaggacttggacaagttcatcaagtttttcgccctg
aagaccgtccaggtgatagtccaagcccgcctcggagagaagatctgcacgcgctcgtct
tcgtcgcccaccggctccgactggtttaatttggccatcaaagacatcccagaggtcact
catgaggccaagaaggcgctggccggtcagctgccgggcgtcggccggtccatgtgcgtc
gagatctccctgaaaacatcagagggcgactccatggagttagagacgtggtgcctggag
atgaacgaaaagtgtgagaaggacatcaaggtgtcctacacggtttataaccgtctgtcc
gtgctgctgaagtctctgctggccatcaccagagtcacgcccgcctataagctgtccagg
aaccagggccacgactacgtcatcttgtacaggatttactttggagaagtgcagctgggc
ggactaggtgaaggcttccagacggtgcgcgtcggcgtcgtggggacccccatcgggacc
gtcacgctgtcctgcgcttaccgcgtcaacctggcgttcatgtccagcaggcagtttgaa
aggaccgcccccatcatggggatcatcgtggatcacttcgtggaccctccctgcagcagc
cagcgacccgccaacctgggccatccctgcatcttcagagcccgggaggaggaggacgga
ggagcgttcgctggagttcaggactcgcaggaagtctgcaccacctccttctccacctct
cctccctctcagtgtgtgtgcactctgagcccctctccttccaaactgtctaagcccctc
cccctggacagtctgcagctcccattggctctcggacttgtcactcacaatctgtacgcc
tcccggctgtcgtacccgcccgccgcttcaggagcagccgcggagttctccaaccaggtg
ctgcacgctgggaaagaaggcggggctcctcagccgccgcacggagccgaagttcagctg
actgtggagcacgccgctaacactccgagcagcagcggtgatgaagacgtcctgctgcag
agcggcgaggggcggagcctctccccctctgacccggtggagtccctcatggcgttcagg
aggaaggtcggagcgtttgtcaacaagcccagcacacaggtaaccgcgggcagtctggac
ctgccgttcgccgccttcgctcctcgaggactggactctgaggagagcgacccgatggtc
cgccccccggactcgcccccctgccggtcccccctgcaggtcagcctccactctcagggc
tcagacgggtcggcgccgcaggacgacttcgtcatggtcgactttcgcccggccttttcc
aaagacgacctgatgccgatggacctgggcacgttctaccgcgagttccagaacccgccg
cagctcgccagcctctccctcaacgccagctcgcagtcaatggccgacgacctggactcg
ctgccggagaagctgcgcgcctacgagaagaacatcgacgagttcgacgccttcgtggac
acgcttcagtag
DBGET
integrated database retrieval system
