Nematolebias whitei (Rio pearlfish): 119428881
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Entry
119428881 CDS
T08042
Symbol
sox1b
Name
(RefSeq) transcription factor Sox-1b
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nwh03000
]
119428881 (sox1b)
Transcription factors [BR:
nwh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
119428881 (sox1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
DUF7900
Motif
Other DBs
NCBI-GeneID:
119428881
NCBI-ProteinID:
XP_037552503
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All DBs
Position
23:complement(8984455..8985625)
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AA seq
278 aa
AA seq
DB search
MYSIMMETDLHPPAGSHSTPGGPAGGGGKAPQERIKRPMNAFMVWSRGQRRKMAQENPKM
HNSEISKRLGAQWKEMTEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKYS
VGGQRLDGPGGGPHAGYAAHVNGWANGSYPGQVAAAAHAMMHEAQLYTHHHPQHAHRYDM
GGLPYNSQSYMSASPPGWYPHHSPGLSPGPLVKAEPSVSPPVARAQPPPCPAGDLRDMIS
MYLPAGEAAPGDRLHVLHPQHYQGGPAPGNGTVPLTHI
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatcatgatggagacggacctgcacccccccgcggggtcccacagcaccccg
gggggacccgcgggaggaggaggcaaggccccccaggagcggatcaagaggcccatgaac
gccttcatggtgtggtcccggggccagcggcggaagatggcccaggagaaccccaagatg
cacaactcggagatcagcaagcggctgggcgcgcagtggaaggagatgacggaagccgag
aagagacctttcatcgacgaggccaagcggctgcgcgccatgcacatgaaggagcacccg
gactacaagtaccggccccgccggaagaccaagaccctgctcaagaaggacaagtactcc
gtggggggccaaaggctggacggcccgggaggggggccgcacgcgggctacgccgcgcac
gtgaacggctgggcgaacggctcgtacccgggccaggtggccgccgcggcgcacgccatg
atgcacgaggcgcagctgtacacgcaccaccacccgcagcacgcgcacaggtacgacatg
ggggggctgccctacaactcgcagagctacatgagcgcgtcccccccgggctggtacccc
caccacagccccggcctctccccggggccgctggtcaaggcggagccgagcgtgagcccg
ccggtggcgcgcgcgcagccgcccccctgccccgcgggcgacctgcgggacatgatcagc
atgtacctgccggcgggggaggcggcccccggggacagactgcacgtcctgcacccgcag
cactaccagggggggccggccccggggaacgggacggtgccgctcacgcacatctga
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