Nematolebias whitei (Rio pearlfish): 119428892
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Entry
119428892 CDS
T08042
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
119428892
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nwh01009
]
119428892
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nwh04515
]
119428892
Protein phosphatases and associated proteins [BR:
nwh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119428892
Cell adhesion molecules [BR:
nwh04515
]
Cadherins
Protocadherins
119428892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
TM_ErbB1
Adeno_E3_CR2
DUF6899
Motif
Other DBs
NCBI-GeneID:
119428892
NCBI-ProteinID:
XP_037552518
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All DBs
Position
2:complement(10799208..10802449)
Genome browser
AA seq
886 aa
AA seq
DB search
MSSRQLSQKGRLWGFCIILLYTTPLPCLTNFSQAKELVYKIKEGLPKGTFIGAIGVDLHL
DFTVDPPFLFSLSQKKVSEQYVNLKNTTGDLFTSATEIDRETLCPYSSVGQACVLSLDVI
VLPQQYFQLVKVKISIEDVNDNRPTFPVDEICMSIPENTQVNTRYAVEQSAVDPDLGVYG
VQTYWLVNDFGVFTLDVEENEGGELTPFLIVTESLDRERQDEYITDIIAEDGGTPPLLGA
ATLKIVITDVNDNCPKFTESQINVTLHGNSTKGTHLARLHAFDPDLGANALISYSYSDRV
PRDTRSLFHLDKLTGVMKLARNVDMVTGTFYKLTVLAIGPGCIPAVATVTVHIIKVVTGP
HAIIPRYIASEKDGVVSIKESEPAFSPIAFFTIKNIGKNQRVDCYLEGAGPFRLVPYQEV
KNEYLLETTEPLDYEKTQKYELILVANNSQGIVIKTFLKVQVLDENDNAPVFQESLVEIS
IEENNPPNTFLARLQASDNDGGSQGEVIYLLGGDAPGIFVVDHVTGVLTVTTSLDREEKE
KYRFIVRAVDQGTPRRESIATVVLTVEDRNDNSPRFINKDFTFFVAENFPGYGEIGMLSV
TDADAGENGWIALSILNGSDIFMIDTGRGALRARTSLDREQQGTYHLWIEAVDGGEPALS
TVTMVTVLLLDVNDNPPVVLFPQSNQSYMLVLPDTTPGTSITEVYAVDKDTGMNAVIAYS
IIKRKGGEQGSFAIDPETGNITLRRELSNRGLYSLLVKVSDHGQPEPLYSTVMVNFFVNE
TVSNESYIQSLLTREADIEVEEKPWYIGQMTDGPERYELFPCRLVLIVLSVTCLGLFFLV
IVLTSYICCKRYKKIRKKRSEVEVPLKIKNDSAQFLNRKFRQISNI
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcagacaacttagccaaaaaggaagactatggggattctgcatcatcttgctg
tacacaaccccccttccctgcctgacaaatttcagtcaagcaaaagagctcgtctataaa
ataaaggaaggattaccaaaggggactttcatcggggctattggagtagacttacattta
gatttcacagttgatcccccctttttattcagtctttcacaaaagaaggtcagtgaacaa
tatgtgaacctaaaaaacaccacaggggaccttttcacatctgctactgagatcgacagg
gagaccctctgtccttacagctctgtggggcaggcatgtgtcctctcactggatgtgatt
gtgttgcctcagcagtactttcagctcgtcaaagttaagatctcgattgaggacgtgaac
gacaacaggcccacgttcccagtagatgaaatctgcatgtccatcccagaaaacacacaa
gtcaacactcgttacgcagtggagcagtccgccgttgacccagacttgggtgtttatgga
gttcagacttactggcttgttaatgactttggtgtatttacactagacgttgaggagaac
gagggaggtgagctgacgccattcctcattgtgacagagagtttggacagagagagacag
gatgaatatattacagatattatagcagaggacggaggaactcctccccttcttggagct
gctactttgaaaattgttatcacggatgtgaacgacaactgccccaaatttacagagtca
caaattaatgtcactctgcatggaaattccaccaaagggacacacttggcacgacttcac
gcttttgaccctgaccttggtgctaatgctctgatcagctattcttacagtgaccgtgtg
ccaagggatactcgcagcttgtttcatttagacaaactcacaggggtgatgaagctggcc
cgaaatgtagacatggtcacaggcacattttataaactcactgttttggccattggaccc
ggctgtatccctgctgttgcaactgtaactgtccacatcatcaaagtagttacaggaccc
catgctatcataccacgttacattgcatcagaaaaggacggagtggtatctataaaggag
tctgagccagctttctctccaattgcttttttcaccattaaaaacattggcaaaaaccaa
agggtggactgttatttggaaggggctggtccctttcggcttgtcccataccaagaggtc
aagaacgaataccttctggaaactacagagcccttggactacgagaagacgcaaaaatat
gagctcattttggttgcaaacaattctcaaggaatagtcatcaagacttttctgaaagtg
caggttttggatgaaaacgacaacgcacctgtgtttcaagaatctttggtggaaatatca
attgaggaaaataatccaccaaacacctttctagcccggctccaagcctcagacaatgat
ggcggaagtcaaggggaagtgatttatctccttggaggcgatgcccctgggatttttgtt
gtggatcatgtcacaggtgtcctgactgtgaccacatcacttgaccgtgaggaaaaagag
aaataccgttttatagttagagcagtggaccaggggacgccacgaagggagtcgattgca
acagtggtgttgacagtggaagatcgcaatgacaacagtccacgtttcatcaacaaggac
ttcactttctttgtggctgagaacttcccaggttacggtgagattggtatgctgtctgta
acagatgctgatgctggagaaaatggctggatagccctgtccatcctcaatggtagtgac
atcttcatgatagacacaggtcgaggagccctaagggccaggacatcactggaccgtgag
cagcaaggcacgtaccatctgtggattgaggcggtcgatggtggagaaccagcgctctcc
actgttactatggtcactgtgttgttattggatgtaaatgataatccaccagtcgtcctc
ttccctcagtctaaccagtcttacatgctcgttctacctgatacaacacctggaacctca
atcacagaagtgtacgctgtggacaaagatacaggcatgaatgctgtgattgcgtacagt
atcattaaaaggaaaggcggtgaacagggttcttttgccattgacccagaaacaggaaat
ataacattaagaagggagctcagcaacaggggcctttacagccttctggtaaaggtcagt
gatcatggccaacctgagccactttactcaacagtgatggtaaacttctttgtcaatgaa
accgtgagtaacgagagctacatccaaagtctgctgaccagagaggcagacatagaggtg
gaggagaagccctggtacattggtcagatgacagatgggcccgagaggtacgagctattc
ccctgtcggctcgtcctcatcgttctttcagtgacatgtctggggctgttcttcctggtt
attgtgctgacatcttacatatgctgcaagaggtataagaagatcaggaagaaaagatca
gaagtggaagtacctttaaagataaaaaatgactctgctcagtttttaaacaggaagttc
agacagatctccaacatctga
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