Nematolebias whitei (Rio pearlfish): 119428989
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Entry
119428989 CDS
T08042
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwh03019
]
119428989
Messenger RNA biogenesis [BR:
nwh03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
119428989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_4
UBA_N4BP1_C
zf-CCCH_2
PRORP
UBA_N4BP1
Motif
Other DBs
NCBI-GeneID:
119428989
NCBI-ProteinID:
XP_037552636
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All DBs
Position
23:8555031..8561123
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AA seq
936 aa
AA seq
DB search
MGQKDHVEAGDVLDLGSNLEYLHVAGADRQAGGADGPPAMEGQEETCGGTTTTASSPPSA
WIEESGGPGTECEPAPSSSFARAAGGDSDGGEGASVCSKNTHQPLCRTPCVDLGTDGPPD
PPSERSAEEEHDPLDLPDPPPSTSEPAPGVMGKAYQAKLEFALKLGYSEETVRLVLSKLG
PDTLINDILGELVKLGTKSDGEQPAGILTSASSTSSSASSCGCSDVLDGQRSDSPCSSDS
VCDQDNLRPIVVDGSNVAMSHGNKEVFSCQGIQLAVDWFQERGHQNITVFVPAWRKEQSR
PDAPITDQEILRRLEKEKVLVFTPSRRVQGRRVVCYDDRFIVKLAYESDGIIVSNDNYRD
LANEKPEWKKFVDERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPIMPEQKKQPCPY
GKKCTYGHKCKYYHPERGAQPQRAVADELRASAKTCAPSKNQGDSGLVKSHSVPAGVIEA
KKGAPNKRQSDPSIRALSYSDAEEKLLAKGHKSSLCGSSGSTGSSSPSPALAGPPSGLGL
PQDQQSRAVTHLPAPSHDLYPHCESPDISYYSVTRAYSGLSLTSRRSPDCRFTNDPDLRH
GSVGSAGSECGSESGVSCGSSCDSYSERSCPACHPDPLLEDGVHFATPHSRLYLPHISSN
HEPCALHAVEYQNVPHSHTPNPGLHAYHLSPVCGQSCIHDQPPPEAPSKRPLYPLPPHLQ
HQPLAARSSCPGDYQSLPQPNHQPPGSPLGRCLAPTLAESVSDSHLYEHLSTTHHHHRPK
ALPGWDSFFRQPPLPSSKYEPSAFQSLPDTRQSSWHAPPWLQDGYNQHHSSHPALHPSPT
HYLSHPPPPAHSPHLPYAPHSSHLAVPSHAPPPYAPPHPGSPVHSRYEDIREKAYVNLCN
IFPSELVSRVMARSPHVTDPQQLAAAILAEKAQTGY
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgggtcagaaggaccatgtggaggcaggagacgtcctcgacttggggtcgaacttggag
tatctccacgtagcgggggctgaccggcaagctggcggcgctgacgggccccctgctatg
gaggggcaggaggagacctgcggcggcaccaccaccacggccagttcccctccatcggcc
tggatagaggaaagcggcgggcccggaacagagtgtgaaccggcgccatcttccagcttc
gctcgtgctgcaggcggtgactcggatggaggagaaggtgcctccgtctgcagtaaaaac
acccaccagccgctgtgtcggactccgtgtgtggacttgggcactgatgggcctcctgac
cctccgtccgaacgttcagctgaagaagaacacgatccgctggacctgccggaccctcca
ccctctacttctgaaccggcgcccggggtgatggggaaagcctaccaggccaagctggag
tttgccctgaagctgggctactctgaagagacggtgcgactggtgctgtccaagcttggc
cctgacaccctcatcaacgacatcctgggcgaactggtcaaactgggcaccaagtccgat
ggcgagcagcctgctggaatattaacctccgcctcatccacgtcttcgtctgcctcctct
tgcggttgctccgacgttctggacggccagcggtcggactcgccctgctcttcggattct
gtctgcgatcaggacaacctgcggcccatcgtggtggacggcagtaacgtcgccatgagc
catggcaacaaggaggtgttttcctgccagggcatccagctggctgtagactggttccag
gagcggggtcaccagaacatcaccgttttcgtgcctgcatggaggaaggagcagtcccgc
cccgatgccccgataacagatcaggagattttgcgtcgcctcgagaaggagaaagtcctc
gtcttcactccctcgcggcgcgttcaaggccgccgcgtggtctgctacgacgaccgcttc
atcgtcaagctggcctacgagtcagacggcatcatcgtctccaacgacaactacagagac
ctggctaacgagaagcccgaatggaagaagtttgtagacgagcgtctgctcatgtattcc
ttcgtcaatgacaaattcatgccgccagatgatcctcttggtcgtcatgggcccagtcta
gacaacttcctgaggaaaaagcccatcatgcctgagcagaagaaacagccctgtccatac
gggaagaagtgcacctacggccacaagtgtaagtactaccaccctgagagaggagctcag
cctcagcgggccgtggccgacgagctgcgtgccagtgccaaaacctgcgccccctccaaa
aaccagggggactcgggactcgtgaagagccacagcgtgccggctggagtcatagaggcc
aaaaaaggtgctcctaacaagagacaatcggatcccagcatccgggctctgtcgtacagc
gacgccgaggagaagctgctggccaaaggccacaagagcagcttgtgtggcagcagcggc
tccaccgggagttcgagcccgtctccggccctggcgggacccccatctggcctcggcctt
ccacaggaccaacaatccagagctgtaacgcaccttccagcccccagccacgacctctac
cctcactgcgagtctccagacataagctactactctgtaacccgggcgtactccggcctg
agccttacatcccgacggagcccggactgccgcttcaccaacgacccagacctgcgccac
ggctcagtaggctcggcgggctctgaatgtggcagcgagagcggcgtcagttgcggcagc
agttgcgactcctacagtgaaaggtcgtgtcccgcgtgtcatccagatcctttactggag
gacggcgttcattttgcaaccccccacagccgcctgtacctcccccacatctcatcgaac
cacgagccgtgcgctctgcacgccgttgagtaccagaacgttccacacagccacacaccg
aacccaggactgcacgcctaccacctgagcccagtgtgcgggcagagctgcattcatgat
cagcctccgccagaagccccatcgaagcggcctctctaccccctgcctccccatctccaa
caccagccactcgccgctcgctccagctgtcccggcgactaccaatctctgccccaaccc
aaccaccagccccctggctctcctctcggccgctgcctggccccgacactagccgagagc
gtgtccgactcccacctttatgaacatctgtctaccacccaccaccaccaccggcctaaa
gctctgcctggctgggactcgttcttcaggcagcctccgctgccgtcatccaagtacgag
ccgtcggcctttcagagcctgccagacacgcgccagtcatcttggcatgccccgccctgg
ctccaagacggctacaaccagcatcactcctctcacccggctctccacccgtcgcccaca
cattacctcagccacccaccacctccagctcactccccccacctgccttacgcaccacac
agctcccatctggcagttccctcccacgctcctcccccttacgcaccgccacacccgggg
tcacctgtgcacagccgttacgaggacattagggagaaggcgtatgtaaacctgtgtaac
atcttcccctcagagctggtgagccgcgtaatggccaggagcccccacgtcacggacccc
cagcagctggctgctgccatactcgcagaaaaggctcaaaccggttactga
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