Nematolebias whitei (Rio pearlfish): 119429109
Help
Entry
119429109 CDS
T08042
Name
(RefSeq) methyl-CpG-binding domain protein 5
KO
K23219
methyl-CpG-binding domain protein 5
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
119429109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nwh03036
]
119429109
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
119429109
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
119429109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWWP
MBD
HIP1_clath_bdg
Lebercilin
Motif
Other DBs
NCBI-GeneID:
119429109
NCBI-ProteinID:
XP_037552755
LinkDB
All DBs
Position
23:16321892..16351299
Genome browser
AA seq
1417 aa
AA seq
DB search
MNGGKDCEAGDERQAIPVQVPIGWQRKAEQGGGVLYVSPSGSVLSSLEQVKTYLLTDGTC
KCGLECPLILHKVFNFDPGAVVKQRTTEDVKADEDVTKLCIHKRKLLAVATLHKSMETHP
PLTLTSSGGGTPPAAAVHSTTQRAIRTKPHDGLPGAVGPECKNPFKMMMGPQQQQRLYPP
QEVGGAQQHELYSGYPRTQRLCSGEPGTKSPNRAVYGGMLSPSPSGAKLYGDGSQSPSVE
TLGSPEVFQRTNPCGFPGSPASVSIHGNIRTPLSPPSVVLHGSPAGQPSCAMTGRTSTPL
SPTATAKSPVMNMNMPRGNFPPGMDLPRVAFHHKLQPPVHPVPPPCALQKRQMTSEKDPL
GILDPIPSKPVSQPHTNAPNPSNFQPNIHSQVPMMNVNIPPPAIVPLPSNLPLPTAKPGP
VGHGGNVQRTQQGGPVSSMSPSPVTSPVHMTGPVHGRMEASPHRSRSSSTSSDHGNFATP
SGHQSQCGPMKVPPRSPRSAIGSPRPAMPSSPSTNKTDPLHQYKDSQLLPVMGNSVSTHQ
HSNPLCSPTSSSSSSSSLPTSSASQKGHPGLLGMPLNQILNQQNAASFPASSLLSAAAKA
QLANQNKLGAAGSSSAGMAAGGVGMSGMGAGGGGNGGSVGHPGSISGPRGMEGHSTLSPM
LPPYSNMLLNTPEGQSGRAALRDKLMAQQRDPARKRKQSSGSAVNHDNSNNMVFNMINKP
GMGVPHMPGPSATEQLRKVGRIGNLHPNTSMAQLLQSMSCQSSHNLGGNGHRPGLNPVPG
SGPVVPAQLHYSDNTGTVPQQNLLVQQRLQGPGEALQPCQSMDPSGGYLVSRSGPFPDMM
AQIQMNNCGSMGPGGRPVGPDGMPMVRPNTNPPPLSHPGPHPSQLRRTNMVMTHSGGDGG
CNQTVSDTGCGMGSLPPHINAGGGQMYQQQIHQGMQQGMSSHPSYQGQQHFSENPPYKDG
NTAGSMACLYQNYQQGMMSHPQFEEQQPRSEGLPAGPPGPDRGPGGGPEVVDAIYRAVVD
AASKGMHVTITTTVSGTTQAGPMTALSAMSAFTANLGEPVNLPQAVSAVLHGHQEGETRP
RQVRPIRGQKTMDPGKSTPDGPEANDYFRSPGRGTPRGQWDGETQHGGGFDAQSNKNAWG
GEEFLECSTQVRSSPCMERPASLAPAPPCPTEGSNNHSLAVAHDKTFLDDSYRFNNCSRT
PANYKERLEQTVERCAHINGVTPHFNSRGYGEVLGPPRQELTGDDQSPSSSTSLEGPLAT
PKDYSHYNGHFNGTTPSPSDTKSLSSEEDLRQPDSPSSELLHYRSRTFNMGELVWGQLKG
FPPWPAKLAGEDQVHCAAVQLREQAKVEPEKLKTLTHDLEALDRAAKRGLKQGKLNNNPL
KAALHEAMSELDKMSGALPTRDRQLMLPKPKRRKISR
NT seq
4254 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcggaaaagactgtgaggcgggagatgagaggcaggccatccctgtccaggtc
cccattggctggcagcgcaaggcggagcaaggtggaggtgtcctgtatgtgagtcccagc
ggctcggtgctgtccagcttggagcaggtgaaaacttacctgctgacggatggaacgtgc
aaatgtggcttggagtgcccactcatcctccacaaggtgttcaacttcgaccccggggcg
gttgtcaaacagagaacgacggaggacgtgaaggcagacgaagacgtgaccaaactctgc
attcacaagaggaaacttctggctgtagccactctgcacaagagcatggagacgcacccg
cctttgacgctaacaagttcaggaggaggtacaccacctgcggctgccgtgcattctaca
actcaacgagcaataaggactaaaccccatgatggtctgcctggtgctgttggacctgag
tgcaaaaatccattcaagatgatgatgggaccacagcagcagcagaggttgtatcctccg
caggaggtgggtggagcgcaacagcatgagctctactccggataccccaggacgcagagg
ctgtgcagtggggagcctggaactaaatccccaaaccgggcagtttatggaggaatgtta
agtccatctccctctggtgctaaactgtatggagatggctctcagtctcccagtgtggaa
actttgggcagccctgaggtttttcaaaggaccaatccatgtgggtttccaggtagtcct
gcctctgtttccatccatggaaacattaggacgcctttgtctccacccagtgttgtactc
cacggctctcctgcaggtcagccatcctgtgccatgacaggaaggactagcacacctctc
tctcctacggctactgccaaaagccctgtcatgaacatgaacatgccgcgggggaacttc
ccccctggcatggatctgcctcgagtcgcatttcaccataaactgcagccccctgtgcat
cctgtaccaccaccctgtgctcttcagaaaaggcaaatgacctctgaaaaggacccctta
ggcatccttgaccccatccctagcaaaccagtcagccagccccacaccaacgcccctaac
ccttccaacttccagcccaacatccactctcaggtaccaatgatgaatgtaaacataccc
cctcctgccattgttcccttgccaagcaacttacctttacccacagcgaagcctgggcct
gtggggcatggtggtaatgtgcaaaggactcaacagggaggtcccgtgtcctccatgtcc
ccatcccctgtcacatcccccgttcacatgactggccctgtacacggaaggatggaagcc
tcacctcatcgctcacggtcatcctccacctcttccgaccatggaaactttgctacaccc
tctgggcaccagtcccaatgtggcccaatgaaggtcccccctcgctctcccaggtctgct
attgggtctccgaggccagccatgccctcaagcccctccaccaacaaaacagacccactc
caccagtacaaagactcccagctgctgcctgtgatgggtaactcggttagcacccatcag
cacagcaaccccttatgttcacccacatcttcctcatcgtcctcatcctctctgccaact
tccagtgcttcccagaagggccaccctggactccttgggatgcccctgaaccagatcctc
aaccaacaaaatgccgcttccttccctgccagcagtctcctctcagccgcagccaaagca
cagctagcaaatcaaaacaaactcggcgctgctggcagcagctctgctggcatggctgct
ggcggcgttggaatgtcaggcatgggggcaggcggtggaggtaatggtggtagtgttggg
cacccaggctctataagtggccctcgaggcatggagggacacagcactttaagccccatg
ctccccccatactccaacatgctacttaacactcctgagggtcagagcggccgggcagca
cttcgagacaaactcatggcccagcagcgggaccctgcacgcaaacgaaaacagtcgtct
ggcagcgctgttaaccacgacaacagcaacaacatggtctttaacatgattaacaaacca
ggaatgggggtcccccacatgccaggacccagtgccaccgagcagctgagaaaagtggga
cgtatcggaaacctgcatccaaacacgtctatggctcagcttctccagtccatgagctgc
cagagttcccacaacctaggtggaaatggccaccgtcctggacttaaccctgtcccgggt
tctggccctgtagtaccggcacagcttcactacagtgacaacacaggcaccgtccctcag
cagaacctcctggttcagcagagactgcagggtccaggagaggccctgcagccctgccag
agcatggacccttctgggggctatctggtttcccgctcaggcccgttccctgacatgatg
gctcagatacagatgaacaactgtgggtctatgggaccaggcggtagaccagtaggacct
gatggcatgccaatggtacgccccaacactaatcccccaccactgtcccatcctggcccc
catccatcgcagctccgtcggaccaacatggtgatgacgcattcaggtggtgatggaggc
tgcaaccaaaccgtgtctgacactggctgtggaatgggctcattgccgccacacatcaac
gccggcgggggtcaaatgtaccagcagcagatccaccagggaatgcagcaggggatgtcc
tctcatccgtcctaccagggccagcagcacttctctgaaaacccaccctacaaagatggc
aacaccgcaggctccatggcctgtctctatcagaactaccagcaagggatgatgtcgcac
ccgcagtttgaggagcaacagcctcgaagtgaagggcttccagctggaccgcctggacct
gacaggggccccggcggagggccggaggtggtggatgccatctacagagctgtggttgat
gctgccagtaagggcatgcatgttaccatcaccaccaccgtgagcgggaccacacaggca
ggtccgatgaccgcccttagtgccatgagtgccttcactgccaacctcggggaacctgtc
aacctcccccaagctgtcagcgcagtcctgcacgggcaccaagaaggagagaccagacca
agacaggtgagacccatacggggccagaaaaccatggatccaggaaagagcactccggat
ggccccgaggcgaacgactacttccggtctcctggtcgaggaacgcccagagggcagtgg
gacggggagacgcagcacgggggaggtttcgacgcacagagcaacaagaatgcctggggt
ggggaggagttcctggagtgctctacccaggtaagaagtagtccctgcatggagagacct
gctagtctggcccctgccccaccgtgtcccactgaggggtctaacaaccacagcctggcc
gtggcccacgataagacctttctggacgacagttaccgctttaacaactgcagccggaca
cccgccaactacaaggagcgtctcgagcaaacagtggagcgctgcgcccacatcaacggc
gtcaccccccacttcaacagccggggttacggagaagtcctgggccccccacggcaggag
ctaacgggggacgaccagtctcccagctcctccaccagcctggagggacctctggccaca
cccaaagactacagccactacaacggccacttcaacggcacgacccccagcccctcggac
acaaagagcctgagcagcgaggaagacctgcggcagccggactccccctcatcagagctg
ctccactaccgctccagaaccttcaatatgggagagctggtctggggccagctgaagggc
tttccaccatggcccgccaagttggctggggaggatcaggtgcactgtgctgctgtgcag
ctgagagagcaggccaaggtagagcctgaaaaactaaaaacactaacgcatgacttggag
gcactggaccgagccgccaaaagaggcctgaagcaagggaaactgaataataatcctcta
aaagctgctcttcacgaggctatgagtgagcttgataagatgtcgggcgcactcccgacg
agggatcgtcagctgatgctccccaagcccaagaggaggaagatttccagataa
DBGET
integrated database retrieval system
