Nematolebias whitei (Rio pearlfish): 119429237
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Entry
119429237 CDS
T08042
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
119429237
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nwh01007
]
119429237
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nwh03016
]
119429237
Enzymes [BR:
nwh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
119429237
Amino acid related enzymes [BR:
nwh01007
]
Aminoacyl-tRNA synthetase
Class II (U)
119429237
Transfer RNA biogenesis [BR:
nwh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
119429237
Prokaryotic type
119429237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
EF1_GNE
PhetRS_B1
B5
EF-1_beta_acid
B3_4
Arc1p_N_like
EAD7
Motif
Other DBs
NCBI-GeneID:
119429237
NCBI-ProteinID:
XP_037552835
LinkDB
All DBs
Position
Unknown
AA seq
847 aa
AA seq
DB search
MPTVGVKRDLLFRALGRTYTDEEFDELCFEFGLELDEITSEKEIISKEQGDSKASGASDV
ILYKIDVPANRYDLLCLEGLVRGLQVFKNRVDAPRYRRVSPVSGDPQRLIITKETAAVRA
HAVAAVLRNITFTQERYDSFIELQDKLHQNICRKRSLVAIGTHDLDTISGPFTYTAKPPA
DICFKPLNQTREYTAAQLMSLYKTDSHLRHYLHIIEDKPVYPVIYDSNGVVLSMPPIING
DHSKISLKTRNVFVECTATDLTKAKIVLDMMVTMFSEYCAQRFTVEECEVVHPDGKTCLY
PELSYRKEKLSAEFINRKVGINESTERIAQLLTRMCLFSQATGVDDEIEVEIPPTRSDVI
HSCDIMEDAAIAYGFNNITHTLPRTYTVANQFPLNKLTELLRQDLAAAGFTEALNFALCS
QEDIADKLGKKISETRAAHISNPKTAEFQVARTMLLPGLLKTVAANRKMPLPLKLFEISD
VVLKDQTKDVGARNSRRFCAVYYNKSPGFEVIHGLLDRTMQLLEVKAGRGLGYHIQAAED
SIFFPGRCAEIFVHGKSVGHLGVLHPDVINRFELTMPCSALEMDIEPFLGYTAETLLTYD
VPMQETRKHQFQTHNESKQAPSHSPPSTKTVFGDMNAQGGLKALNDFLANKSYIEGFVAS
QADAAVFDAIPSPPSQSFCHLRRWYNHIKSFQLERARLPSAKSQFVLPPTPPASPNDTND
NDIDLFGSDDEAESLEAARIREQRLAEYAAKKSKKPALVAKSSILLDVKPWDDETDMAKM
EECVRSVSMDGLLWGQSKLVPVGYGIKKLQIGCVVEDDKVGTDLLEEAITAFEEYVQSVD
VAAFNKI
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccgtcggagtaaaaagagatcttctcttcagagctctcggcagaacttacact
gacgaggagtttgacgagttgtgcttcgagtttgggctggagctagacgaaatcacctca
gagaaagagatcatcagcaaggagcagggcgactccaaagcttcaggtgcgtctgacgtc
atcctctacaagatcgacgtacccgctaaccgctacgacttgctgtgtctggagggactg
gtccgtggactgcaggtcttcaagaatagagtcgacgcccctcgctacagacgtgtgagc
ccagtcagtggagaccctcagaggctgatcatcactaaagagacggcagcagtgcgagcc
cacgctgtagcagccgtgctgaggaacatcactttcactcaggagcgctatgacagtttc
atcgagctgcaggacaaactacatcagaacatctgcaggaagaggagcctggtggccatc
ggaacccacgacctggacaccatctccgggcccttcacgtacacggccaaacctcccgca
gacatctgcttcaagccgctcaaccagaccagagaatacactgcagcccagctcatgagc
ctctacaagacagacagccacttgagacattacctgcacattattgaagacaagcctgtg
taccccgtcatctatgacagtaacggcgtcgtcctgtccatgcctcccatcatcaacggg
gatcattcaaaaatctccttaaagacgaggaacgtctttgttgagtgcacagccaccgac
ctgaccaaggcaaagatcgtgctggacatgatggtgaccatgttcagcgagtactgtgcc
cagcgtttcacggttgaggagtgtgaggtggtgcacccagatggcaagacgtgcttatac
ccagaactgtcttacaggaaggagaagctgtctgctgagttcatcaacagaaaagttggc
attaatgagtcgactgagaggatagctcagctgctgaccaggatgtgcctgttctcccaa
gcaactggcgtcgacgatgagatcgaggttgagatcccaccgacccgttcagacgtcatc
cactcttgtgacatcatggaggatgctgccatcgcttacggtttcaacaacatcacccac
accctgccgcgcacgtacactgtagctaaccagtttcctctgaacaaactgacagaactg
ttgaggcaagacctggcagctgctggctttacagaggctctcaactttgctctgtgttct
caagaggatattgctgacaagcttgggaaaaagatctccgagactagagcggctcatatt
tccaaccccaagactgcagagtttcaggtggcgcgcaccatgctgctgccgggcctgctg
aaaactgtagctgccaacaggaagatgccccttcccctcaaactgttcgagatctcagac
gtggtgctgaaggaccagaccaaagacgtcggggcgaggaacagtcggcgtttctgtgcc
gtctactacaacaaaagtccaggatttgaggtgattcatggcctgctggacaggaccatg
cagctgctggaggtgaaggctggccgaggactggggtaccacatccaagctgctgaggac
tccatcttttttcctggtcggtgtgctgagatctttgtgcatggaaagagcgtagggcac
cttggagtcctccatccagatgtcattaaccgctttgagttgaccatgccctgctctgcc
ctggagatggacatcgagccgttccttggctacacggcagagaccctcctcacatatgac
gtccccatgcaggaaacccgcaagcaccagttccaaacgcacaacgaatccaagcaggca
ccctcacactccccgccttccactaaaactgtctttggtgacatgaacgctcagggaggt
ctcaaagcacttaatgatttcctggccaacaaaagctacattgaaggttttgtggcatcc
caagctgacgctgccgtattcgatgccatcccttctcctccctcacaatccttttgccac
ctcaggcgctggtacaatcacatcaagtcctttcaactggagagagcacgtctcccatca
gccaaaagtcagtttgtcctcccacccactccccctgcctcgccaaatgacaccaacgac
aatgacattgaccttttcggttctgacgacgaggcagagagcttagaggcggctagaata
agagaacagcgcctcgctgagtatgccgccaagaagtccaagaaaccagcactcgttgcc
aagtcctccatcttgcttgatgtcaagccctgggacgatgagacggacatggccaagatg
gaggagtgcgtccgcagcgtcagtatggacgggctgctgtgggggcagtccaagctggtg
ccagtgggctacggcatcaagaagctgcagataggctgcgtggtggaggatgataaagtg
ggcacagatctgctggaggaagccatcaccgcctttgaggaatatgttcaatctgtggac
gtggctgcttttaataagatctga
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