Nematolebias whitei (Rio pearlfish): 119429302
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Entry
119429302 CDS
T08042
Symbol
usp8
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8 isoform X1
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04137
Mitophagy - animal
nwh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119429302 (usp8)
04137 Mitophagy - animal
119429302 (usp8)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nwh01002
]
119429302 (usp8)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119429302 (usp8)
04121 Ubiquitin system [BR:
nwh04121
]
119429302 (usp8)
Enzymes [BR:
nwh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119429302 (usp8)
Peptidases and inhibitors [BR:
nwh01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
119429302 (usp8)
Membrane trafficking [BR:
nwh04131
]
Endosome - Lysosome transport
Others
Others
119429302 (usp8)
Ubiquitin system [BR:
nwh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
119429302 (usp8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP8_dimer
WW_USP8
UCH_1
Rhodanese
Motif
Other DBs
NCBI-GeneID:
119429302
NCBI-ProteinID:
XP_037552891
LinkDB
All DBs
Position
2:13429773..13443546
Genome browser
AA seq
1063 aa
AA seq
DB search
MPAVSTGVKELYLSTSLGDLNRKAEVKPDKTSTRSYVQSACKLFKAAEENRLDRDEEKAY
VLYMKYLTVYDVIKKRPDFKQQPEYYITMLGPNSFKKAIEEAEKLSESLKLRYEEVEVRK
KLEEKERLEEKKKREEESEKRNDRSSPKTSATNRKDSKKVKGEQNELKSVITKAAQPAGG
ITAEKLFHMMKNQTISIIVMDARGHRDYEESHIQVAGQICISVPEEAVSPGITVNQIEAK
LPDASKDQWRRRGFMDYIILLDWFSSVTDLKLGTTLQSLKDALFKWDSLTILRSEPLVLE
GGYENWLLFYPMYSSNAKVQPPRRTVVNSLPQLNFSYPSLEEPQPPTPVQTEPEVSPEPP
EPSAPALVNGVTPAEPPASKTSTVVDTVEVPVSGSTTPGLDLTKRADQPPATARSFPQFD
RTKKPSVPDPTKPNQKMDSTPNGPAIPDRSVKPAFSPNAALSKDEQKQIHSEVVAMKEKA
RQEQEKRNQERRLEEEQKEKETRERLEKEESERRKEDEEKKHQEKRRLERQRAEEEEDKE
NRVWDERERPSSDIPSKSMSLDSPAPNRIISEIKREPLTRARSEEMGRSVPGLPDGWMRF
LDTVTGTFRYYHSPTNRVHLYPPEVTVPQTPPSTPPTVKPKPSAEPDTEHEREQEQSKLK
RSYSSPDISQDLREEAQKKTAAVTATIPSINRDTKPPSLKVHSKAEIVRPSAAKIRNLNP
TFGGLGASLTGLRNLGNTCYMNSILQCLCNTPGMSEYFNNNYYLEDINRANILGHKGEVA
EEFAVIIQSLWAGQYKNISPRDFKNTIGKINEQFSGYDQQDSQELLLFLMDGLHEDLNKR
ADNRKRYKEEENDHLNDQAAADVSWSKHKMLNESIIVALFQGQFKSTVQCLTCHCKSRTF
ETFMYLSLPLASTSKCSLQDCLRLFSKEEKLTDNNKVFCRKCKTHRDSTKKLEIWKVPPI
LLVHLKRFSYEGRWKQKLQTSVDFPLDCLDLSQYVIGPKQNLKRYNLYGVSNHYGGLDGG
HYTAYCKNAQKQRWYKFDDHEVTDISASSVKSSAAYILFYSTL
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcagtatctacaggggtcaaagagctgtatttatccacatctctgggtgacctc
aacagaaaagccgaagtaaagccagacaagacgagcaccagaagctatgttcagagtgcc
tgcaaacttttcaaggcggcggaggagaaccgtctggaccgggatgaggagaaagcttat
gtgctgtacatgaaatatttaacggtatacgatgttattaaaaagagaccagacttcaaa
caacaaccggagtattacataactatgctggggccaaacagctttaagaaagccatcgaa
gaagctgagaagctgtctgaaagccttaaactcaggtacgaagaagtcgaggtcagaaaa
aaactggaggagaaggagagattagaggagaagaagaaaagggaggaggaaagtgagaaa
agaaatgaccggagctctccgaaaacctcggccacaaacaggaaggacagcaagaaggtg
aaaggagagcagaatgagctgaagagcgtcatcactaaagctgcacagccggcaggcggg
atcacagcggagaaacttttccacatgatgaagaaccagaccatctccataatcgtcatg
gacgcccgcggccacagagactacgaggagtcccacattcaggtcgcgggtcagatctgc
atcagcgtgcccgaggaggccgttagtcccggaatcactgtgaatcagattgaagcgaag
ctgcccgacgcgtccaaggatcagtggaggcggcgaggatttatggattatataatcctg
ctggactggttcagctcagtcacggaccttaaattaggcaccaccttacagagccttaaa
gatgccctctttaagtgggacagcttgaccattttgcgtagcgagccgctggttctggag
ggaggctacgagaactggctgctgttttaccccatgtactcgagcaacgccaaagttcag
cccccgagacggacggtcgtcaacagcctgcctcaattgaactttagctacccgtcttta
gaggaaccacaacctccgactccggttcagacggagcctgaagtttcacctgagcctcca
gaaccatcggctcctgcgttggtgaacggggtaacacctgccgagcctccagcatccaaa
acctccacggttgttgacactgttgaggtccccgtctctggttccacgactcctgggctc
gacctaaccaagagggccgaccagcctcctgcgacagccagatcgttcccccagtttgac
cgtaccaagaaaccgtctgtcccagatccaactaaacccaaccagaagatggactccacc
ccgaatggtccggctatccccgatcgctccgtcaaaccggcgttcagccccaacgctgct
ctgtccaaagacgaacagaagcagatacactccgaggtggtggccatgaaggagaaggcg
agacaggagcaggaaaaacgcaaccaggagcgccgtttggaagaggagcagaaggagaag
gagacgagagagaggctcgaaaaggaggagagtgagaggaggaaggaggacgaagagaag
aaacatcaggagaaaaggagactcgagaggcagagagcagaggaagaggaggacaaagag
aaccgggtctgggatgagagggagaggccgagttctgacattccttcaaagagcatgtct
ctggactcgcctgctccgaaccgcatcatcagtgaaatcaagagggagcctctgacgcga
gcgaggagtgaggagatgggacggagtgtcccgggtcttccagacggctggatgaggttt
ctcgacacggtgactggcaccttcagatactatcactcccccaccaaccgcgtccacctg
taccccccggaggtcacggtccctcagactcctccctccacacctccgacggtcaaaccg
aagccgtcggctgagcccgacaccgagcacgagcgagagcaggagcagtcgaagctgaaa
cgctcctactcctctccggacatcagccaggacctgagagaggaggcccagaagaagacc
gccgccgtcaccgccaccatccccagcatcaacagagacaccaaacctcccagcttaaag
gttcattctaaggcagagatcgttcgaccatctgctgctaaaatccgtaacctgaatccc
acgtttggaggtttgggcgcttcgctgactggccttcgtaacttgggcaacacgtgctac
atgaactccatcttgcagtgtctctgcaacactcccgggatgtccgagtacttcaacaac
aactactacctggaggacatcaacagggccaacattctgggtcataaaggggaggtggcg
gaggagtttgccgtgatcatacagtccctgtgggccggacagtacaagaacatcagtcct
cgggacttcaagaacaccatcggcaaaatcaacgagcagttttccggctacgaccagcag
gactcccaggagctgctgctgttcctcatggacgggctccacgaagacctcaacaagaga
gccgacaacaggaagcgctacaaggaggaggagaacgaccacctgaacgaccaggctgca
gctgatgtgtcctggagcaaacacaagatgctgaacgagtccatcatcgtagcgctgttc
cagggccagtttaagtccacggtccagtgtctgacctgccactgcaagtcgcgcacgttt
gagaccttcatgtacctgtcgctgcccctggcctccaccagcaagtgctccctgcaggac
tgtctgcggttattctccaaagaagagaagctcaccgacaacaacaaggtgttctgcagg
aaatgcaaaacccaccgagactccaccaagaaactggagatctggaaggttcccccaatc
cttctggtgcacctgaaacggttttcttatgaaggtcgatggaagcagaagcttcagacc
tcagtggacttccctctggactgtctggacctgagccagtacgttatcgggcccaaacag
aacctgaagagatacaacctttatggagtttctaatcactacggaggcctcgacggcggc
cattacaccgcctactgtaagaacgcccagaagcagcgctggtacaagttcgacgaccac
gaagtgaccgacatctccgcctcttcggtgaagtcgtctgcagcgtacatcctgttttac
tccaccctgtga
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integrated database retrieval system
