Nematolebias whitei (Rio pearlfish): 119429392
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Entry
119429392 CDS
T08042
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03030
DNA replication
nwh03410
Base excision repair
nwh03420
Nucleotide excision repair
nwh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119429392
03410 Base excision repair
119429392
03420 Nucleotide excision repair
119429392
03430 Mismatch repair
119429392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nwh03032
]
119429392
03036 Chromosome and associated proteins [BR:
nwh03036
]
119429392
03400 DNA repair and recombination proteins [BR:
nwh03400
]
119429392
DNA replication proteins [BR:
nwh03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
119429392
DNA Replication Termination Factors
ELG1-RFC complex
119429392
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
119429392
DNA repair and recombination proteins [BR:
nwh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
119429392
Check point factors
HRAD17(Rad24)-RFC complex
119429392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
nSTAND_NTPase5
AAA_lid_RFC1
RCF1-5-like_lid
AAA_14
AAA_16
Viral_helicase1
Rad17
Mg_chelatase
AAA_11
RuvB_N
AAA_19
nSTAND3
DEAD
MipZ
AAA_5
AAA_assoc_2
AAA_18
RNA_helicase
SLFN-g3_helicase
AAA_28
AAA_30
AAA_24
NTPase_1
DNAX_ATPase_lid
AAA_23
ABC_tran
MeaB
AAA_25
T2SSE
AAA_2
PPR_1
BcsB
AMP-binding_C_3
AAA_3
AAA_29
Motif
Other DBs
NCBI-GeneID:
119429392
NCBI-ProteinID:
XP_037552957
LinkDB
All DBs
Position
Unknown
AA seq
335 aa
AA seq
DB search
MDADMAEASSRQKPMESSLKTDSEAVEPPSRSSYELPWVEKYRPLKLSEIVGNEETVSRL
EVFAREGNVPNIIISGPPGTGKTTSILCLARALLGASMKDAVMELNASNDRGIDVVRNKI
KMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRIMEIYSRTTRFALACNASDKIIEP
IQSRCAVLRYSKLTDGQILARLQDVVDKERLSVSDDGLEAVIFTAQGDMRQALNNLQSTN
SGFGFINSENVFKVCDEPHPLLVKSMLGHCVEGNIDEAYKVVEQLWALGYSPEDIIGNIF
RVCKTYQMAEYLKLEFIKEIGLTHMRVVEGVNSQL
NT seq
1006 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggacatggccgaggcgtcgagccgccagaaaccgatggaaagcagcctaaag
acggactcggaggccgtggagcctccgtctcggagctcctacgagctgccgtgggtggag
aagtaccggccgctgaagctgagtgagatcgtggggaacgaggagaccgtgagccgcctg
gaggtgttcgcccgggaggggaacgtcccgaacatcatcatctcaggtcctcccggcaca
ggaaagaccaccagcatcttgtgtttggcccgggctctgctgggagcctcgatgaaggac
gctgtgatggagctgaacgcctccaacgacaggggcatcgacgtggtgaggaacaagatc
aagatgtttgctcagcagaaggtcacgctgcctaaaggtcggcacaagatcatcatcctg
gacgaagctgacagcatgacggacggagcccagcaggccctcaggaggatcatggagatc
tactccaggacgacgcgcttcgccctcgcctgcaacgcctccgataagatcatcgagccg
atccagtcccgctgcgccgtgctgcgctactccaagctgacggacggacagatcctggcc
cggctgcaggacgtggtggacaaggagcgcctgtccgtgtccgacgacgggctggaggcc
gtcatcttcacagcgcagggagacatgagacaggcgctgaacaacctgcagtccaccaac
tcgggcttcggcttcatcaacagcgagaacgtgttcaaggtgtgcgacgagccccacccc
ctgctggtgaagagcatgctgggacactgcgtggaggggaacatcgacgaggcctacaag
gtggtggagcagctgtgggctctgggctactctccagaagacatcatcggaaacatcttc
agggtctgcaagacctaccagatggccgagtacctcaaactggagttcatcaaggagatc
ggtctgacccacatgcgggtggtggagggggtgaactcgcagctgc
DBGET
integrated database retrieval system