Nematolebias whitei (Rio pearlfish): 119429718
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Entry
119429718 CDS
T08042
Symbol
efl1
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119429718 (efl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nwh03009
]
119429718 (efl1)
Ribosome biogenesis [BR:
nwh03009
]
Eukaryotic type
Pre-60S particles
GTPases
119429718 (efl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EF-G_D2
MMR_HSR1
EFG_IV
Motif
Other DBs
NCBI-GeneID:
119429718
NCBI-ProteinID:
XP_037553220
LinkDB
All DBs
Position
2:15099015..15115112
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AA seq
1110 aa
AA seq
DB search
MGTTNLDRIKVLQRNPANIRNLCILAHVDHGKTTLADCLVASNGIISNRLAGKLRYLDSR
EDEQVRGITMKSSAISLHYSTGGQEYLINLIDSPGHVDFSSEVSTAVRLCDGAVVVVDAV
EGVCPQTQVVLRQAWLENIKPVLVINKMDRLILELKLTPLEAYIHLQKILEQVNAVTGTL
FTSKVLEERAEKEEKEKVKVEEEVSGEDQVYDWSAGLEDVDDSHLYFSPDQGNVVFASAI
DGWGFSIQQFAEIYRRRMGIKTEVLLKTLWGDFYLNFKAKRIMTGAQAKGKKPLFVQLVL
DNIWSLYDAVVTRRDKENVEKVVTSLGVKVMDRDLRHSDPKVLLSAICNQWLPVSQAVLA
MVCKKLPSPLDMTSERVEKLMSVGARRFDSLPEQTRDLKPVFLRCSSEEDAPVIIFVSKM
FAVDSKALPQFRQRPLNLEEIAQRRELARQRHAERMASNRTGTEVTCSEPAAGPSSGEGS
VTCTQMETLTLTDSKAEEEEESKEVFIAFARVYSGMVKKGQRLFVLGPKYDPVQGLRSLP
EGCRASDCVSEVPHLSCCSVENLYLLMGRELEELQEVPAGNVLGLRGLEDFILKSATLST
SPACPPFTPLNFEATPIVRVAIEPKHPGEMPKLVRGMRLLNQADPCAEVLIQETGEHVLV
TAGEVHLQRCLDDLRERFAKIDISVSKPIIPFRETVVRPPKVDMVNEELGRQQKVAVIHQ
VKEEVPQGRVSDTLHVDTGGLITLTTPNRQATVSVRAIPLPQEVTSLLERSSEIIRTLEL
INMSLREGRTVDLSRRTLEDIAGLKVQLETLLQGWKWKNTIDRIWAFGPRRFGPNILLNN
IKDYTRPSVWQCLSWLDRTDLDAAPVPAFRDLDNSIVSGFQLATLSGPMCEEPLMGVCFS
IERWDVLSSAHQNPPKSQTSETSADGSEDGTAGSQQRTDSSDCYGPVSGQLIAAMKEACR
HAFQAQPQRLMAAMYTCEIIATADVLGRVYGVLGKREGRVLHEEMKEGTDMFIIKAVLPV
AESFGFADEIRKRTSGLASPQLILSHWEVISSDPYWVPTTEEEYLHFGEKADSDNQALKY
MNAVRRRKGLYVEEKIVEHAEKQRTLSKNK
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgggaaccaccaacctggacaggatcaaggttctgcagaggaacccggctaacatcagg
aacctctgcatcttagcccacgttgatcacggtaaaaccacgctggctgactgcctcgta
gcgagtaacgggatcatatcgaaccggctggccgggaagctgaggtatctggacagcaga
gaggatgagcaggtccgaggaatcaccatgaagtccagcgccatctctctgcactacagc
accggtggtcaggagtacctcataaatctgatcgactctccgggtcacgtggacttctcg
tcagaggtgtccacggcggtgcgtctgtgtgacggagctgttgttgttgttgacgctgtg
gaaggggtgtgtcctcagacccaggtggttctccgtcaggcgtggctggagaacatcaaa
ccggttctcgtcatcaataagatggacagactgatcttggagctgaagctcactcctctg
gaagcttacatccacctgcagaagatcctggagcaggtgaacgcagtgacaggaactctg
ttcacgtccaaagttctggaggagcgagcggagaaggaggagaaggagaaggtgaaggtg
gaggaggaggtctcgggtgaagaccaggtttatgactggagcgccgggctggaggacgtc
gatgactcccatctctacttttctcctgaccaggggaacgtggtgtttgccagcgccatc
gatgggtggggcttcagcatccagcagtttgcagagatctacagacggaggatgggaata
aagaccgaggtcctgctgaaaacgttgtggggagatttttatctgaacttcaaagcaaag
aggatcatgacaggagctcaggccaaaggaaagaaacctctgtttgtgcagctcgtcctc
gataacatctggagtttatacgatgcagtcgttaccagaagagataaggaaaatgtggaa
aaggtggtgacatcactgggggtaaaggtcatggacagggacttgcgtcactctgaccct
aaggtgctgctgtctgctatctgtaaccagtggttaccagtgtctcaggctgtccttgcc
atggtctgcaagaagcttcccagtcctttagacatgacctcagagcgggtggagaaactg
atgagtgttggagctagaaggttcgactcactacctgaacagacccgagacctaaaacca
gtgttccttcgatgttccagtgaggaagacgctcctgtcatcatctttgtgtcgaagatg
tttgctgtggactctaaggcgctccctcagttcagacagagacccttgaacctggaggag
atcgctcagcgccgggagctggcccggcagagacacgccgagaggatggcgtctaatcgg
accgggacagaggtcacctgctcagaaccagctgctggtcccagctcaggtgagggttca
gttacctgtactcagatggaaactttgacactaacggactcaaaagcggaggaggaagag
gagtcgaaggaggtcttcatcgcgtttgctcgggtgtacagcgggatggtgaagaaaggt
caacggttgtttgtgctgggacccaagtatgacccggtccagggcctgcgttcgcttcca
gagggctgcagagcttcagactgtgtgtctgaggttcctcatctctcctgctgttctgtg
gagaacctttaccttctcatgggcagagagctggaggagctgcaggaggttcctgctgga
aatgttctcggtcttagaggactggaggactttatcctgaagtctgccaccctgtcgacc
tcccccgcctgccctccctttaccccactcaactttgaagccacgcccatcgtacgtgtc
gccatagagcccaaacatccgggtgagatgccgaagctggtacgcgggatgcgtctgttg
aaccaagcggatccttgtgctgaggttctgatccaggaaacaggagaacatgttctggtg
acagctggtgaggtccatctgcagcgctgcctcgatgacctcagagagcggtttgctaaa
atcgacatcagcgtgtcaaagcctatcatccccttcagagagactgtggttcgtcctccc
aaggtggacatggtgaacgaggagcttggcagacagcagaaagttgctgttattcatcag
gtgaaagaagaggttcctcagggtcgtgtatctgataccctgcatgttgacactggtggt
ctcattacccttaccactcccaacagacaggccactgtcagcgtccgggccatcccctta
ccacaagaggtcaccagtctgttggagagaagttctgagattatccggactctggagctg
atcaacatgtcccttagggagggcaggactgtggatctcagtcgcaggaccctggaggac
attgctggactgaaagtccaactagagactttattgcagggatggaagtggaagaacacc
atagatcggatctgggcttttggtcctcgcaggttcggtccaaacattctgcttaacaac
attaaggactacacccggccctcggtgtggcagtgcctgagttggctggacagaactgat
ctagatgcagctccagttcctgcttttagagaccttgacaacagtattgtcagtggattc
cagctggcgactctgtcgggtcctatgtgtgaggaacccctcatgggggtctgtttttct
atcgaaaggtgggacgtcctgtcttcagctcatcagaatcccccaaagagtcagacttca
gagacttcagcagacggcagcgaggatgggacggcggggtcccaacagagaacagactct
tcggactgctacggaccggtttcgggtcagctcatcgccgccatgaaggaggcatgccgc
catgccttccaggctcagcctcagaggctcatggctgccatgtatacctgtgagatcatc
gccacagcagatgtgttgggacgggtttacggcgtcctcgggaagcgagaaggtcgagtt
ctccacgaggagatgaaggaagggacggacatgttcatcatcaaggcggtcctccccgtc
gctgagagttttggctttgctgatgagatccgtaagagaacgagtggattggccagtcct
cagctgatcttaagccactgggaggtgatcagcagtgatccatactgggttcccaccaca
gaagaagaatatctgcactttggagagaaagcagattctgataaccaggccctgaaatac
atgaacgctgtccgccgacgcaaaggtctttatgtggaggagaagattgtggagcatgcc
gagaagcaaaggaccctcagcaagaacaagtag
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