Nematolebias whitei (Rio pearlfish): 119429729
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Entry
119429729 CDS
T08042
Name
(RefSeq) transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nwh02000
]
119429729
03037 Cilium and associated proteins [BR:
nwh03037
]
119429729
Transporters [BR:
nwh02000
]
Other transporters
Pores ion channels [TC:
1
]
119429729
Cilium and associated proteins [BR:
nwh03037
]
Other cilia and associated proteins
Stereociliary proteins
119429729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Orf78
Motif
Other DBs
NCBI-GeneID:
119429729
NCBI-ProteinID:
XP_037553228
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All DBs
Position
2:15117149..15145346
Genome browser
AA seq
1156 aa
AA seq
DB search
MSSGSDPLAVSSRTLSAAKRHKSVRKNSRRIYSAYQGSSDDEGKDDEGVDSNDPEEMFQN
IQYQKEIIANIRTRPWPMRRKLKVLKQARVIVLKYEGQLTRTRGYQTAGADLLKKLYRLL
NNIVVTFMPWEVRIKKIESHFGSGVASYFIFLRWLFGINIVLTIMTGAFVVLPELLAGAP
FGTTRSKTIPKEHLPSAQDLDTIWSLGGYLQYSVLFYGYYGRMRKIGSAGYRLPLAYFLV
GMAVFAYSFIILLRKMAKNSRLSLASASDENFTFCWRIFCAWDYLIGNPEAAECKGAAIV
NNIREAIVEEQEKKKDTSLAVLISLRILANILVLLSLAGSIYIIYFVVERSQKLEQEKPE
LTLWEKNEVSVVVSLITMIAPSAFELVAQLEMYHPRTSLRFQLARVLVLYLGNLYSLIIA
LLDKVNSMSSAVRGGSGNWTESSSFLATVSQLETTSLSTQVSEQHNITMATITTALKFTS
DHRVHLGPVYNQTGPLEKSARSQQDQCWETYVGQEMLKLSIIDMIFTVASILLIDFIRGL
VVRYLSDCCCWDLESKFPEYGEFKIAENVLHLIYNQGMIWMGAFFSPCLPAFNVLKLIGL
MYLRSWAVLTCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPTIFAIVRYRPSEHCGPFS
GQEKIYDIISETVDTDFPLWFSKVMSYVTSPVVVLPGLLLLFMLIYYLQSIARSLKFTNN
QLRLQLQTERTEDKKKVFQLAAARLQAPEPAVDKNLDQQETDIISKEASIHTTPSPRRNG
SVTNVQSPGNSGNSIRTITQSASRTKLNRGTRSGSVRSPGVTILPKRRAEYIPNRPRPFI
GGPSGTCRSKSCLHMAYNSPARGSDSNQSEPLYRKTVRPLQPAEASGIVAAQSNGGRRGH
ATCYVIVNEHEPRKKLLRTATRIPCHYVMEEPTEILELYPRNIRRYPTRTTHHQPHSYRS
HTPQHLSKEEEEEEEEEEVEWDKGRRKVSLGKTHRPRSLSDLHQQAQFYIGEGRNDTRTA
RYRLQEDDEEDDGKGDMDWGDLDFYSPSQVGRRAAEPGRSGHHLRYPRRLCQSPSRTRHL
ESHVKPKLRAQMETPQTESDSASVASSSDQQNSSTDQYIQVIHNKERHLNTELKNLSKTK
LDLNFTESQDLVCSKV
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaggttctgaccctctagctgtgagcagcaggactctgtctgcagccaagaga
cacaaaagtgtccggaagaactccaggaggatttattcagcctatcagggctcgtcagat
gacgaaggtaaagatgatgagggggtggacagcaacgacccggaggaaatgttccagaac
attcagtaccagaaggagatcatcgccaacatccggactcgaccgtggcccatgagacgc
aaactcaaagtcctcaagcaggcgagagtgatcgtcctgaagtacgaaggccagctgaca
agaaccagagggtaccagacggctggagctgatctgctgaagaaactttaccgtctgctg
aacaacatcgttgtgaccttcatgccgtgggaagtcaggatcaaaaaaatagaaagtcac
tttggatctggtgttgcctcctactttatcttcctgcgctggctctttgggatcaatatc
gtcctcaccataatgaccggagcctttgtcgtcctgccggagttgctggccggagctccg
tttggaacaaccagaagtaaaacgattcccaaggagcatctaccatcggctcaggacttg
gacaccatctggtctcttggggggtacctgcagtactcagtacttttttacggttactac
ggcaggatgaggaaaatcggcagcgccggctaccgcctgcctctggcatacttccttgtt
gggatggccgtgtttgcctacagtttcatcattctgttacgaaaaatggccaagaactct
cgtctgagtctggccagtgcttctgatgagaacttcaccttctgctggaggattttctgt
gcgtgggattacctgataggaaacccagaggctgcagagtgcaaaggagcagccatcgtc
aacaacatcagggaagccattgttgaggaacaggagaagaagaaggacaccagtctggcg
gttctgatcagtctgcggatcttagccaacattctggttctgctgtctttagccggcagc
atctacatcatctacttcgtggtggaacggtcccagaaactggagcaggagaaaccggag
ctgacgctgtgggagaagaatgaggtcagtgtggtggtctctctcatcaccatgatcgcg
ccttcggcctttgagctggtggctcagctggagatgtaccatcccagaacctccctgcgg
ttccagctggccagggttctggttctgtatcttgggaacctctacagcctcattattgct
ctgctggataaagtcaacagtatgagttctgctgttcggggaggttctggtaactggact
gagtccagttctttcctggccactgtatctcagcttgagaccaccagtctctccacccag
gtgtctgagcaacataacatcaccatggcaactatcaccacagctctgaagtttactagt
gaccatcgggtccacctggggccagtctacaaccagacaggtcctctggagaagagcgcc
cgctctcagcaggaccagtgctgggagacctacgttggacaggagatgctgaagctctcc
attattgatatgatcttcaccgtggccagcatcctcctcatcgacttcatccgaggtctg
gtggttcgatatctgagtgactgctgctgctgggacttggagagcaagtttcctgaatat
ggagaattcaagatcgccgagaacgtcctgcatctgatttataaccaaggaatgatctgg
atgggagccttcttctcaccgtgtcttcctgcctttaacgtcttgaagctgattggtctc
atgtatctgaggagttgggccgtcctcacctgtaatgttcctcatcagcaggtgtttcga
gcttccagatccaataatttctaccttgcgatgctgctgttcatgttgtttctctgcatg
ctgcccaccatctttgccatcgtgagatacagaccatctgagcactgcggacccttcagc
ggtcaggagaagatttatgacatcatctcagagacggtggacaccgacttccccctgtgg
ttcagtaaagttatgagttacgtcacaagtccagtcgtggttctgccgggtctgctgctg
ctgttcatgctcatctattatctccagtccattgccaggtccctgaagttcaccaacaac
cagctgaggctacagctgcagacggaacgaactgaggacaagaagaaagtcttccagctg
gctgcagccaggctccaggctccagaacctgcagtggataaaaacctggatcagcaggag
accgacatcatcagcaaggaggcctccatccacaccaccccctccccccggagaaacggc
agcgttacaaacgtccagtctcctggtaacagtggtaacagcatccggaccatcacccag
tctgcctctagaaccaagctgaaccgaggaaccaggtctggatcggtccgcagcccagga
gtgaccatactgcccaaacgccgagcagaatacatccccaacaggcccagacccttcata
gggggtccgagtggcacctgcaggtccaagtcctgcctccacatggcctataactcccct
gcacgtggttctgacagcaaccagtctgaacccctgtacaggaagaccgtccgccccctc
cagcctgcagaggcttctgggatcgttgccgctcagagtaatggaggacgccgcggccac
gccacctgctacgtgatcgtcaacgagcatgagccccgaaagaagctgctgcgcacggcc
acacggatcccgtgtcattacgtgatggaggagcccacagagatcttggagctgtaccct
cgcaacatcagacggtatccaacccgcaccacccaccaccaaccgcactcctaccgatcc
cacaccccacagcatctcagcaaggaggaggaggaggaggaggaggaggaggaggtggag
tgggataaaggcaggaggaaggtgtcactaggaaaaacccataggccccggtccctgtcg
gacctccaccaacaggcacagttctacatcggtgaaggccgtaacgatacccgcacggcg
aggtaccggctccaggaggacgacgaagaggacgacggtaaaggagacatggactggggt
gatctggacttttattctccatctcaggttggtagaagagcagctgaaccgggccgaagt
ggtcatcacctccggtaccccagaagattgtgtcagtccccatcaagaaccaggcacctg
gagtctcatgtaaagcccaagctgagggcccagatggagacaccccaaacagagtcggac
tcggcctctgtggcctccagcagcgaccagcagaacagcagcacggaccagtacattcag
gtgatccacaacaaggagcgccacctcaacaccgagctcaagaacctgtccaagaccaag
ctggatctgaacttcaccgagtctcaggacctggtttgctccaaggtttga
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