KEGG   Nematolebias whitei (Rio pearlfish): 119430056
Entry
119430056         CDS       T08042                                 
Name
(RefSeq) TATA-box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
nwh  Nematolebias whitei (Rio pearlfish)
Pathway
nwh03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:nwh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    119430056
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:nwh03000]
    119430056
   03021 Transcription machinery [BR:nwh03021]
    119430056
Transcription factors [BR:nwh03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    119430056
Transcription machinery [BR:nwh03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     119430056
  RNA polymerase III system
    TFIIIB
     119430056
  RNA polymerase I system
    SL1/TIF-1B
     119430056
SSDB
Motif
Pfam: TBP NUDE_C TFIIA
Other DBs
NCBI-GeneID: 119430056
NCBI-ProteinID: XP_037553420
LinkDB
Position
2:complement(18370309..18374620)
AA seq 303 aa
MDQNNSIPPFQGLPSPQGAMTPLQMFSPIPYGSGLTPQPVQNTNSLSILEEQQRQQQQQQ
QQQAAQQANTGLPGTLGQAPQLFHSQTVAGSTTTALPGNPPLSNNPVTPMTPITPSTPAS
ESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSS
GKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLT
HQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRTEIYDAFDNIYPILKGFR
KTT
NT seq 912 nt   +upstreamnt  +downstreamnt
atggatcagaacaacagcataccgccttttcaaggactgccgtcgcctcagggtgccatg
acccccttacagatgttcagtcctataccatatggctcgggcctgacaccccagccagta
cagaacacaaacagtttgtctatactcgaggaacagcagagacaacaacagcagcagcag
caacaacaagcagcgcagcaggccaacacaggccttccggggacattggggcaagcacct
caactgtttcattcccagacagtagctggttcgaccacgacagcgctcccaggaaatccc
ccgctctctaacaacccagtaacccccatgactcccatcacaccatctacacctgcctca
gagagctctggaattgtaccacagctacaaaacatagtatctactgtaaatctgggctgt
aaactggatctgaagaccattgccctgagagccagaaatgccgaatacaacccgaagcgt
tttgctgctgtcattatgagaatacgagaaccaaggaccactgctctcatcttcagttct
gggaaaatggtctgtactggagcaaaaagtgaggaacagtcaaggttagcagctagaaaa
tatgctcgtgtggtgcagaagcttgggttccccgccaagtttttggacttcaagattcag
aacatggtgggcagttgtgatgtgaagtttccaattcgactggagggattggttctcact
catcagcagtttagcagttatgagcccgagctgtttccaggattgatttataggatgatc
aaacccagaattgtcctgctaatttttgtttctggaaaagtagtacttacaggggccaaa
gtaagaactgagatctacgatgcatttgacaacatataccccattctaaaaggctttcgc
aaaacaacgtag

DBGET integrated database retrieval system