Nematolebias whitei (Rio pearlfish): 119430056
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Entry
119430056 CDS
T08042
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119430056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nwh03000
]
119430056
03021 Transcription machinery [BR:
nwh03021
]
119430056
Transcription factors [BR:
nwh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
119430056
Transcription machinery [BR:
nwh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
119430056
RNA polymerase III system
TFIIIB
119430056
RNA polymerase I system
SL1/TIF-1B
119430056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
NUDE_C
TFIIA
Motif
Other DBs
NCBI-GeneID:
119430056
NCBI-ProteinID:
XP_037553420
LinkDB
All DBs
Position
2:complement(18370309..18374620)
Genome browser
AA seq
303 aa
AA seq
DB search
MDQNNSIPPFQGLPSPQGAMTPLQMFSPIPYGSGLTPQPVQNTNSLSILEEQQRQQQQQQ
QQQAAQQANTGLPGTLGQAPQLFHSQTVAGSTTTALPGNPPLSNNPVTPMTPITPSTPAS
ESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSS
GKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLT
HQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRTEIYDAFDNIYPILKGFR
KTT
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggatcagaacaacagcataccgccttttcaaggactgccgtcgcctcagggtgccatg
acccccttacagatgttcagtcctataccatatggctcgggcctgacaccccagccagta
cagaacacaaacagtttgtctatactcgaggaacagcagagacaacaacagcagcagcag
caacaacaagcagcgcagcaggccaacacaggccttccggggacattggggcaagcacct
caactgtttcattcccagacagtagctggttcgaccacgacagcgctcccaggaaatccc
ccgctctctaacaacccagtaacccccatgactcccatcacaccatctacacctgcctca
gagagctctggaattgtaccacagctacaaaacatagtatctactgtaaatctgggctgt
aaactggatctgaagaccattgccctgagagccagaaatgccgaatacaacccgaagcgt
tttgctgctgtcattatgagaatacgagaaccaaggaccactgctctcatcttcagttct
gggaaaatggtctgtactggagcaaaaagtgaggaacagtcaaggttagcagctagaaaa
tatgctcgtgtggtgcagaagcttgggttccccgccaagtttttggacttcaagattcag
aacatggtgggcagttgtgatgtgaagtttccaattcgactggagggattggttctcact
catcagcagtttagcagttatgagcccgagctgtttccaggattgatttataggatgatc
aaacccagaattgtcctgctaatttttgtttctggaaaagtagtacttacaggggccaaa
gtaagaactgagatctacgatgcatttgacaacatataccccattctaaaaggctttcgc
aaaacaacgtag
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