Nematolebias whitei (Rio pearlfish): 119430060
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Entry
119430060 CDS
T08042
Symbol
arid5b
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 5B
KO
K25857
AT-rich interactive domain-containing protein 5
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nwh03000
]
119430060 (arid5b)
Transcription factors [BR:
nwh03000
]
Eukaryotic type
Helix-turn-helix
ARID
119430060 (arid5b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
Cas_APE2256
Motif
Other DBs
NCBI-GeneID:
119430060
NCBI-ProteinID:
XP_037553427
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All DBs
Position
1:complement(59015875..59126472)
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AA seq
1210 aa
AA seq
DB search
MTTLHTLLHCHRDSYQLQHHDNLLNNVPSEKLSMQGWARADLNFLSLLXQWVGSSCGLHG
PYIFYKAFKFHRGGKPRILALGDFFFVRCRPEEPVCIAELQLLWEERTSRQLLSSSKLYF
LPEDTPQGRAAAQHGEHEVIAVSEKVIVRLSDLVKWTVPDFSGWDNGLKVEPLKPSVLRE
LGTNGRREALHRYRESTLTSGLNFKDVQRERAQLGQEEDGRKVLVLSYPQYCRYRSVLAR
LREQPSSLLIDHTVLALGGIAALGGSTRILYCRDTFEHPTLLQNESICDEFAPNLKGRPR
KKKLSISQRRDSQGQAPSQGSSGSTAVAAQDPSSPESKTTTKVKPGYKAVPNGKLATSAK
QKPAGLGKKSSTEEREREKEKEEKNDEETSEESRAEEQSFLVALYKYMKERDTPIERIPF
LGFKQINLWTMFQAAQKLGGYELITVRRQWKHVYDELGGNPSSTSAATCTRRHYERLLLP
YERHLKGEQDMPLPLTKPRKQESSQEKTSAAGAKTKSVVAKKLKGSKLGSKKDKRETKAE
QTQQDSMEKDVNDELSIAVKKESSLQDEPIVIEEEELHLTLKKEESLTEEQPPSLDCRTP
HGGFSLRTGPSPQPEWRQISEALKAKLVGEQQTEGNFIPKHPYLPHRWDQTKPAVHVALP
EHFSKVKDSIENHGGRVGKVLPMCKQADEQCLDLSSDSFPEKEDYGMIKKESTQGSGQTA
AYCKASQGVMSPLAKKKLLSQVCDSNAYSFSLQSPPPTAISSLPVVLVSEHEKEKRKGEE
EVVRQRRNGLSDSVLEVAPIFRPSVIQHAQSSKAHQQSTGGQSERSTVGEASDAYSCRTS
HHIQSQSSVPWQPYLPQIQTQDGVETTEEKLLQGPAAQSRSYAGDCYSSPHLHSLYRQTE
SCLSQERMAGFSSGERREHYRRDREGSQSFTCGSLEQEGLAYRSHYSDRTQTRRENGEAE
DEPRDFTISKPLSQRVSSFSKTPFCGLSYPIMHHGLDSHPKACRVTPMTISPPKQSSSEQ
SQTFPSSKASGDLPLSTSIRPSKRSLAEPESDNPPERKVRVVTPIHPASTIRRSDPEELK
PAEPALAIHLNNHLPEGHPTTSFPPHHAAPLYAGIYPHGTLVSPGAQDGLQQHPSLQYLK
SQSAVSPLVPSFAIHSMMLHRQLLASSPSPHHFYRQPGGASLYGDLLHHLYPLSTLPPPQ
LSSVHPSTRL
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccttacacaccttgcttcactgccatcgtgactcgtatcaactacaacatcat
gacaacctgctcaataatgtgccgtctgaaaagctctccatgcagggctgggctcgagct
gatcttaatttcttgtcccttctgtaacagtgggtgggctcgtcttgcggcttacacgga
ccatatatcttctataaagcctttaaatttcaccggggcggcaagcccaggatcctggct
ctgggagactttttcttcgtgcgctgcagacccgaggagcccgtgtgcatagcggagctg
cagctcctctgggaggagaggacgagcaggcaacttttatccagctccaaactttatttc
ctacccgaggatactccccagggacgcgcggcggctcagcatggagagcatgaggtcatc
gcagtgtcagagaaggtgatcgtgcggctgtcggacctggtgaagtggacggtaccggac
ttctcaggatgggacaacggtctgaaggtggagcccctcaaaccctctgtgctccgggag
ctggggaccaacggcaggcgggaggccctccaccgctaccgggagagcaccctgaccagt
ggactcaacttcaaggatgtacagagggagcgagcgcagctgggccaggaagaggacggg
cggaaggttttagtcctgagttacccgcagtactgccgctaccgctccgttctggctcgg
ctcagagagcagccctcctcgctgctcatagaccacacagtgctggcgctgggcggcatc
gccgcgctgggcggcagcaccaggatcctgtactgccgtgacaccttcgagcaccccacc
ctgctgcagaacgagagcatctgcgacgagtttgctcccaacctgaaggggcgacctcga
aagaagaagctttccatctctcagaggagggactcccagggtcaggctcccagtcaaggc
tcctcagggtcaacagctgtagcagctcaggacccctcaagtccagagagcaaaacgaca
accaaggttaagcccggctataaagcagtacctaatggaaaactagccacgtcagctaaa
caaaagcccgccggccttgggaagaaatcctcgaccgaggagagggaacgagagaaggag
aaggaggagaagaacgatgaggaaacatcagaggagagccgagcggaggagcagtctttc
ttagtcgctctctacaagtacatgaaagagcgagacacgcccatagagaggatccccttc
ctcggcttcaaacagatcaacctttggaccatgtttcaagctgctcagaaactcggagga
tatgagttgatcacagtccgcaggcagtggaaacatgtgtatgatgaattgggtggcaac
cccagcagcacaagtgccgccacctgtacacggagacactacgagaggctcctccttcct
tacgagaggcaccttaaaggtgagcaggacatgcccctccccttgaccaaacccaggaag
caggagagcagccaagagaagacatctgcagctggagccaaaacaaaatcagttgtggcc
aagaaactgaaaggctccaagttagggagtaaaaaggacaaaagagaaacaaaagcagaa
caaacacagcaggactcgatggagaaagacgtgaatgacgaactctccatagccgtgaaa
aaggagtcgtctctccaagatgaaccgattgtaatagaggaggaagagttgcatctcacc
ctgaagaaagaggagtcgctgacggaggagcagccaccctcacttgactgcagaacccca
catggaggtttctccctccgcacgggtccttctcctcaacctgaatggaggcaaatcagt
gaggccctcaaagcgaaactcgtcggcgaacagcaaaccgaagggaacttcattccaaaa
catccttacctgcctcatcgctgggatcagactaaacctgctgtgcacgttgctctgcct
gagcacttctctaaggtcaaagactccattgaaaatcacggcgggagagtgggcaaggtg
ctgccgatgtgtaagcaggcagatgaacagtgtttagacctgagctcagattctttccca
gagaaagaggactatggtatgattaagaaggagtctacccagggctctggacagacagct
gcctactgcaaagctagccagggggtcatgtctcctttggccaaaaagaagctcctctcc
caagtgtgcgattctaatgcttactccttttctctgcagtctccacctcccacagccatc
tcctctctcccggtcgtattggtttccgaacatgagaaagagaagagaaaaggtgaagag
gaggtggtgaggcagagacgcaacggtttgtccgacagcgtcctcgaggtagcccccata
tttaggccatcggtcatccagcatgcccagagcagcaaggctcaccaacagagcacgggt
gggcagtcagagaggagcactgtcggggaggcgtcagacgcctacagctgccggacaagc
catcacattcagtcccaatccagtgtgccgtggcagccgtacctcccccaaattcagacc
caagacggcgtggaaaccactgaggagaagttactccaaggcccagccgctcagtccagg
agctatgcaggcgactgctactcttcccctcacctccacagcttatacagacaaactgag
agctgcctgagccaagagaggatggctggcttcagcagtggagagcggagagagcactat
cgcagggaccgtgagggcagtcaaagctttacctgtggcagcctggagcaggagggcttg
gcctacaggtctcactacagtgacaggactcaaacacgtagagagaacggagaggccgag
gacgagcccagagacttcaccatttcaaagcctctctcgcagagggtttcctccttctcc
aagactcctttctgtggtctctcctatcccatcatgcatcatggtttggattcccatcct
aaagcatgcagagttacacctatgacaatctctccccccaaacagagctcatctgagcag
tcacagacgtttcctagctccaaagcttcaggtgacctgcccctcagtacttctattcga
cccagtaagcgaagcctcgcggaacccgagagcgacaatcccccagaacgtaaagtgcgc
gtagtgacacctatccatcctgccagcacaatccgacgcagcgacccggaggagctgaaa
cccgcagagccggctcttgccattcacctcaacaatcatctacccgaaggccaccctaca
acctccttccccccacatcacgctgcgcccctctacgctggtatttacccccacggtacc
ctggtgtcaccgggcgctcaggacgggctccagcagcacccaagtctgcagtacctgaaa
agccagtcggccgtgtcccccctcgtgccctcgtttgccatccactccatgatgctccac
aggcagctgttggcctccagccccagcccgcaccacttctacagacagccaggtggggcg
tcgctgtacggggacttgttgcaccacctctaccctctctccaccctcccaccaccccag
ctgtcatcggtacaccccagcaccagactgtga
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