Nematolebias whitei (Rio pearlfish): 119430232
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Entry
119430232 CDS
T08042
Symbol
bbs4
Name
(RefSeq) Bardet-Biedl syndrome 4 protein
KO
K16531
Bardet-Biedl syndrome 4 protein
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nwh03036
]
119430232 (bbs4)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
nwh03037
]
119430232 (bbs4)
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
119430232 (bbs4)
Cilium and associated proteins [BR:
nwh03037
]
Primary cilia and associated proteins
BBSome
119430232 (bbs4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_19
TPR_11
TPR_14
ANAPC3
TPR_12
TPR_16
TPR_17
TPR_CcmH_CycH
TPR_9
TPR_7
TPR_6
TPR_15
TPR_Slam
ARM_TT21_2nd
ARM_TT21_N
ARM_TT21_4th
TPR_10
ARM_TT21_C
NatA_aux_su
PknG_TPR
TPR_20
Wzy_C_2
Coatomer_E
ChAPs
HrpB1_HrpK
TPR_MalT
CC142_N
Motif
Other DBs
NCBI-GeneID:
119430232
NCBI-ProteinID:
XP_037553605
LinkDB
All DBs
Position
2:38730192..38742162
Genome browser
AA seq
534 aa
AA seq
DB search
MADEEKATALPVSAEAKKRRAPKAPELPIVERRNWLIHQHYLHKDYETCKVIIKEQLQET
SGMCEYAVYVQALILRLEGKIQQSLELFQSCTILNPSSSDNLKQVARSLFLLGKHKAAIE
IYHEAAKLNEKDWEISHNLGVCCYFIKDFKSAEEHLNTALRINKHDKTFMMLGKVHLLAG
ETDRAIEVYRRAVEFSPENTELLTTLGLLYLQLGKYQKAFEHLGNALTFDPNNYKAILAA
GSMMQTHGDFDVAMNKYRVAACAVPESPPLWNNIGMCFFGKKKYVAAISCLKRAHYLSPF
DWKVLYNLGLVHLTMQQYASAFHFLSAAINLNPRMGELYMLLAVALTNLEDVENATRSYE
QAVNQDETNPLVNLNFAIFLYNHGDKKRALDQYQDMERKVNLLRDSSNSFEFDPELMDMA
QKMGTALQVTEGLVWTKPGKDSKSKPHSAATTKTPGAPLGTNQALGQAMSSAASYNKNIQ
LLKGVSKGPPTAPDPEVDVENAPSPPTDPPGSPEPEASGGSKPKTSRKKTKVEE
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggagaaagcgacggcgctcccagtttctgctgaagctaagaagcgacgt
gcacctaaagcaccagagcttcccattgtggagagaagaaactggctaatccaccagcac
tatctccacaaggactatgagacctgtaaggtgatcatcaaagaacagctgcaggagacc
agtggaatgtgtgaatatgccgtttatgttcaagcattaatcttacgtcttgagggaaag
atccaacagtccctggagctatttcagagctgcaccatccttaatccaagcagcagtgac
aatttaaagcaagtggcccgctcactatttcttctgggaaagcacaaagcagctattgaa
atttatcacgaagctgcaaaacttaacgaaaaagactgggagatcagccataatctgggc
gtgtgctgttacttcatcaaagacttcaaaagtgctgaggagcatctaaacacggctctt
cggataaataaacacgacaagactttcatgatgctcgggaaagttcatctgctggctgga
gaaactgacagggccattgaagtgtacaggagggcagtggaattctctccagagaacact
gaactcctgaccacgcttggcctcctttatttacagcttgggaaataccagaaggcattt
gagcaccttgggaatgccctcactttcgaccccaacaattataaggccatcctggctgca
ggcagcatgatgcaaacccatggtgactttgatgtggccatgaacaagtacagagtggca
gcatgtgctgttcctgagagccccccactctggaacaacatcggcatgtgcttctttggc
aaaaagaaatacgtagccgccatcagctgtctgaagcgtgctcactacttgtctcctttt
gactggaaagtgttgtacaacctggggctggtacacctgaccatgcagcagtacgcctca
gccttccacttcctcagtgcagccatcaatctgaaccctcgaatgggggaactttacatg
ttgctggcagtggctttgaccaatttggaggatgtggagaatgccaccagatcatatgaa
caagctgtgaatcaggatgaaaccaaccccctagtcaacctgaactttgcaatattcctc
tataatcatggagacaagaagagagctctggatcaataccaggacatggaaaggaaagta
aaccttcttcgggacagcagtaacagctttgaatttgatcctgagctgatggacatggct
cagaagatgggcactgccctgcaggttacagagggtctggtgtggactaaaccaggcaag
gactccaaatctaaacctcactcagcagcaacaaccaaaacccctggtgctcctcttggt
acaaaccaagctctgggtcaggccatgtcttcagctgcgagctacaataagaacatccag
ctgctaaaaggggtttccaaaggccctcctacggctcctgatccagaggtggatgtagag
aatgctcccagcccaccgacagaccctccagggtccccagaacctgaagcctcaggcggc
tccaaaccaaaaacatctcggaagaaaactaaggtggaggaatga
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