Nematolebias whitei (Rio pearlfish): 119430245
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Entry
119430245 CDS
T08042
Name
(RefSeq) leucine-rich repeat-containing protein 4C-like
KO
K07523
netrin-G1 ligand
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
119430245
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
V-set
ig
LRR_9
Ig_2
LRRNT
Ig_6
Syndecan
Motif
Other DBs
NCBI-GeneID:
119430245
NCBI-ProteinID:
XP_037553620
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Position
2:complement(41985486..41987594)
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AA seq
631 aa
AA seq
DB search
MLNTMISTLQCQTMRGRRLKGAYSNPLFVLLLALQILVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLRDVPDGISTNTRYLNLQDNLIQVIKVDSFKHLRHLEILQLSKNHIRSIEIGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISDGAFKDLSNLRYLNLGMCNLKEIPNILPLIRLEELEMSGNQLSVLKPSSF
TGLVNLQKLWMMHAQIQTIERNSFDDLQSLVELNLAHNNLTFLPHDLFTPLHRLERVHLH
HNPWNCNCDILWLSWWLKETVPANTSCCARCFTPSDFKGRYIGELDHSYFQCDVPVIVEP
PSDLNVTEGMGAELKCRTSSLTSISWLTPNGSLVTHGAYKVRLSVLNDGTLNFTSVTMQD
TGTYTCMVSNTAGNISASAVLNVTSVDNSGVTYFTTVTVEVIGNPGEESQTSLPPFEWIP
SSTTKGTPVSTRTTERTYTIPVLDLDGEGALNGLDEVMKTTKIIIGCFVAITLMAAVLLV
IFYKMRKQHNQQDPDGPASSMEVITVEEELAGVAAMERHLSLPPLEHYNHYNTYKNTYHH
APMLSSIHSSATQEPLLIQACSKDNVQETQI
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacacaatgatctccaccctccagtgccagacaatgagaggtcgtaggctgaag
ggggcatattccaaccccctttttgtgctgcttttggcccttcagatcctggtggtggct
ggactagttcgtgctcaaacctgtccttctgtctgctcatgcagtaaccaattcagtaaa
gtcatatgcactcggcgtggtctacgagatgtaccagatggcatttccaccaatacccgg
tacctgaacctccaggataacctcattcaggtaatcaaggtggacagtttcaagcatctg
cgtcatctggagatcctgcaactgagcaaaaatcatatccgcagcattgaaattggggcg
tttaatgggttagccagtctcaacacactagagctctttgataatcgactgacaacaatc
cccaatggagcatttgagtacttgtccaaacttaaggaactgtggctaagaaacaacccc
attgaaagtataccatcatatgccttcaaccgggtcccttctctaagaagactagatttg
ggtgagctcaaacgtctttcctacatttctgacggagctttcaaggatttgagcaacctg
cgttatctaaacttgggaatgtgcaacctcaaggaaattccaaacattttaccattgatt
aggcttgaagagctagaaatgtcaggcaaccagctctctgtcctcaagcccagctctttt
acaggcttagtgaatcttcaaaaattgtggatgatgcacgcccagatccaaactattgag
agaaattcatttgatgatcttcagtcactagtggagctgaacttggctcacaacaacctg
acctttttaccacatgacctctttacaccattgcatcgtcttgaaagagtccacctccat
cataacccttggaactgcaactgtgacattttgtggctcagctggtggcttaaggaaaca
gtgcctgccaataccagctgctgtgctcgttgctttactccttcagactttaagggacgc
tatattggagaactggaccacagctacttccagtgtgacgttcctgttattgtagagcca
cccagtgacctaaatgtgactgagggcatgggtgctgagcttaaatgtcgtacaagctca
ctgacctctatctcttggctcacaccaaatggctctttggtgacacatggggcttataag
gtgcgtttgtctgtactcaatgatgggacactaaactttactagtgtaacaatgcaggac
actggaacttacacttgtatggttagcaacacagcaggcaacatttcagcttctgctgtg
ctcaatgttacttctgtggataacagtggggtgacttattttaccactgtcactgtagag
gtgattgggaaccctggggaggaaagccaaacatctcttcccccatttgagtggatacca
tcctcaactacaaagggtactcctgtttcaacacgaaccacagagcggacttacaccatc
ccagttctggatttggatggagaaggtgccctcaatggtctggatgaggtgatgaaaacc
accaagattatcattggctgctttgtggcaattacactaatggctgctgttttgctggta
attttctacaagatgaggaagcagcataaccagcaggaccctgatggccctgcctcctcc
atggaagttattactgttgaagaagagcttgcaggtgttgctgctatggagagacaccta
tcgcttcctccactggagcactacaaccactacaatacctacaaaaacacttaccaccat
gctcctatgctcagttccatacacagctcagccacacaggaacctttactgattcaagct
tgctcaaaagacaacgtccaagagacccaaatctaa
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