Nematolebias whitei (Rio pearlfish): 119430356
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Entry
119430356 CDS
T08042
Name
(RefSeq) transcription activator BRG1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119430356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nwh03021
]
119430356
03036 Chromosome and associated proteins [BR:
nwh03036
]
119430356
Transcription machinery [BR:
nwh03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119430356
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
119430356
Chromatin remodeling factors
BAF complex
119430356
PBAF complex
119430356
GBAF(ncBAF) complex
119430356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
119430356
NCBI-ProteinID:
XP_037553690
LinkDB
All DBs
Position
3:complement(1613267..1639514)
Genome browser
AA seq
1554 aa
AA seq
DB search
MDSMHEKGLSEESRFSQMKGMSMRAGGHSGMGPPPSPLDQHSQGYHSPLGGSDHSSPVAS
NGPPSGPLMPSSSSSSSSVGPGSSSASLDGPSGDQHSLGPNNRPGPPGSSGPVPSSGPGL
GSGVSSLGSGLENSGSTGPGGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGK
RPMPGMQQQPMTNLVPGAAGGPGGAPTGPGPGPMGSGYSRAHGMMGPNMPPPGPSGTPAG
MQGPNPNGPPKSWPEGPMVNAAAPSNAPQKLIPPQPTGRPSPAPPSVPPAASPVMPPQTQ
SPGQPAQPPPMMPYHAKQNRITPIQKPCGLDPVEILQEREYRLQARIAHRIAELENLPGS
LAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALDAKAYKRSKRQSLREAR
ITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSITGKIQKLTKAVATYHANT
EREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRAH
KAAQALKEKKKKKKKKKKLENAEGQTPALGPDGEPLDETSQMSDLPVKVIHVDSGNILTG
VDAPKAGQLETWLEMNPGYEVAPRSDSEDSEDEEEEEEDEEESQPSSAPVEEKKKISDPD
SEDVSEVDVQHIIEHAKQDVDDEYSGAAFARGLQSYYAVAHAVTEKVDKQSTLLINGQLK
QYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTL
SNWVYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKQVLAKIRW
KYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVLLTGTPLQNKLPELWALLNFLLPTIFKS
CSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKGKGG
TKTLMNTIMQLRKICNHPYMFQQIEESFSEHLGFSGGIVQGPDLYRASGKFEVLDRILPK
LRATNHKVLLFCQMTSLMTIMEDYFAYRSFKYLRLDGTTKAEDRGMLLKTFNDPESEYFI
FLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVE
EKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEVWGQEVMNEEDEV
PDDETVNQMIARSEEEFEQFMRMDLDRRREEARNPRRKPRLMEEDELPTWIMKDDAEVER
LTCEEEEEKMFGRGSRQRKEVDYSDSLTEKQWLKAIEEGTLEEVEEEVRHKKTTRKRRRD
RDLDHPGPSGSSGSRGRGDRDDDGKRQRKRGRPPVEKLSPNPPSLTKKMKKIVDAVIKYK
DSTSGRQLSEVFIQLPSRKELPEYYELIRKPVDFRKIKERIRSHRYRSLGDLERDVMLLF
QNAQTFNLEGSLIYEDSIVLQSVFTSLKQKIEKEEESDGEESEEEEEEQEDGSESESRSV
KVKIRLGRKEKGGDRGKGRSRRSGRTRAKPVVSDDDSEDEQEEERSPSGTDEDS
NT seq
4665 nt
NT seq
+upstream
nt +downstream
nt
atggactccatgcacgagaagggcctgagtgaggagagccgcttcagtcagatgaagggg
atgtctatgagagcaggggggcacagcggtatgggccccccacccagtcctctggaccaa
cactcacagggctaccactctccattagggggttctgaccactccagtcctgttgcatct
aatggacccccatctggtcccctaatgccatcatcttcatcctcctcctcttccgttggt
cctgggtcttcctcagcctccttagacggccccagtggagaccaacactccttggggcct
aataacaggcctgggcctccaggtagttctggaccagtcccaagctctggaccaggtcta
ggctctggtgtctctagtcttggctctggtcttgaaaacagtggctctactggtcctggt
ggcccaactcccttcaaccagaaccagctccatcaactcagagcccagatcatggcttat
aagatgctagcccggggccaacctctgccggatcatctccaaatggccgttcaaggaaag
aggccgatgccagggatgcagcagcagcccatgaccaacttggtccctggagctgctgga
gggccaggaggtgctccaacaggaccagggcctggaccaatgggctcaggctacagccga
gctcacggaatgatggggcccaatatgcctcccccaggtccatcagggacaccagctgga
atgcaaggaccaaacccaaatggacctccaaagtcctggcctgaaggtcccatggtgaac
gcagcagccccctctaatgcgcctcaaaaactgatcccccctcagcccacgggcaggcct
tcccctgccccgccttcagttcccccagctgcttcgcctgttatgcccccacagacccag
tcccctggtcagccagcacagcctcctcccatgatgccttaccacgccaagcagaaccgc
atcacacccattcagaagccctgcggcctcgaccccgtggagatcctgcaggagagggag
tataggttgcaggctcggatcgctcatcgcattgctgagctggagaaccttcccggttct
ttagctggtgatttacgcaccaaagctacgatagagctcaaagctctccgcctgcttaac
ttccagagacagctgcgtcaggaggtggtggtgtgcatgaggcgcgacacggctctcgag
acggcacttgatgccaaggcctacaagcgaagcaaacgtcagtctctgcgggaggctcgc
atcacagagaaactggagaagcagcagaagattgagcaggagcgcaaacgtaggcagaag
catcaggagtacctcaacagcatcctgcagcacgccaaagacttcaaggagtatcaccgt
tcaatcacggggaagatccagaagctgaccaaagctgtggccacctaccacgccaacacg
gagcgagagcagaagaaggagaacgagcgtatcgagaaggaacgaatgaggaggctcatg
gctgaggatgaggagggttaccggaaactgatcgaccagaagaaggataagcgcctggcc
tacctgctgcagcaaactgacgagtacgtcgccaacctgacggagctggtccgagcccac
aaagctgctcaggccctgaaggagaagaagaagaagaagaagaaaaagaagaagctggag
aacgcagagggacagactcctgctctggggcctgatggagagcctctggatgagacgagc
cagatgagtgacctgcctgtgaaggtcatccacgtggacagcgggaacatcctgaccggt
gtggacgctcccaaagctggacagctggagacctggctggagatgaaccctggttacgag
gtagctccacgctcagacagtgaagacagtgaagatgaggaagaggaggaggaggatgag
gaggagtctcagccttcgtcagctccagtcgaggaaaagaagaagatttcagacccggac
agtgaagatgtgtcagaggtggatgtccaacatatcattgagcatgccaaacaggacgtg
gacgatgagtacagtggtgcagcgttcgctcgaggacttcagtcctattacgctgtggct
cacgctgtcacagagaaggtggacaaacagtccactctactgataaatgggcagcttaag
cagtaccagattaaaggtctcgagtggctggtttctctttacaacaacaacctaaatggg
atcctggctgatgagatgggtctggggaaaaccatccagaccatcgctctcattacatac
ctcatggagcacaaacggctcaatggaccctacctcatcattgtacccctatcaacttta
tctaactgggtgtacgagttcgacaagtgggccccgtcagtggtgaaagtgtcctacaag
gggtctcctgctgctagaagagcctttgtccctcagcttcgcagcggcaagtttaatgtt
ttactcaccacttatgagtacatcatcaaggacaagcaagtgctggccaagattcgctgg
aagtacatgattgtggacgaaggacaccgtatgaagaaccaccactgtaaactgacccag
gtcctgaacacccactaccttgctccaagacgagtcctgctgaccgggactccgctgcag
aacaaactacctgagctgtgggcacttctcaacttcctgttgcccaccattttcaagagc
tgcagcaccttcgagcagtggttcaatgctccttttgccatgactggagagaaggtggac
cttaatgaggaggagaccatcttgattattcgccgcctacacaaagtgctacgccccttc
ctgttacggagattaaagaaggaagtggaggcacagcttccagagaagggaaaaggaggc
acaaagacactgatgaacaccatcatgcagctgaggaagatctgcaaccatccttacatg
tttcagcagatcgaggagtccttctctgaacatttagggttctccggtgggatagtccag
ggccctgacctgtatcgagcatcgggaaagtttgaagtgttggatcgaatcctgccaaag
ctaagagccaccaaccacaaggtgctgctcttctgtcagatgacctcgctcatgaccatc
atggaggactacttcgcctaccgcagcttcaagtacctgcgcctggatggcaccacgaag
gctgaagacagagggatgttactgaagacattcaatgacccagagtcggagtactttatc
tttctcctgagcacacgagcaggaggtctcggtctgaacctgcagtctgccgacactgtg
attatttttgactcggactggaacccacatcaggacctgcaggctcaggaccgagcccac
cgcatcggtcagcagaacgaggtgcgcgtgctgcgtctctgcacagtcaatagtgtggag
gaaaaaatcctggcagcagctaaatacaaactcaacgtggaccagaaggtcattcaggct
ggcatgtttgaccagaagtcttccagccacgagcgcagggccttcctgcaggccatcctg
gagcacgaggagcaagacgaggtctggggtcaagaagtcatgaatgaggaggacgaggtg
cccgatgatgagacggtgaaccagatgatcgccaggagtgaagaagagtttgagcagttc
atgcgcatggatctggacaggcgtcgcgaagaggcccgcaacccccggcgaaaaccccgc
ctgatggaggaggacgagctgcccacctggatcatgaaagacgacgctgaagtcgagcgg
ctgacctgcgaggaggaggaggagaaaatgtttgggcgaggttctcggcagcggaaggag
gtggactacagcgattccctgacagagaagcaatggctcaaggcgattgaggaaggcacg
ctcgaggaggtggaggaagaagtgcgccacaaaaagacgacccgcaagaggaggcgggac
cgtgacctggatcaccctggtccctccggttcctctgggagccgaggacgaggggacaga
gacgatgacgggaagaggcagaggaagaggggacgcccaccggtagagaaactgtccccc
aatcccccctccctcacaaagaagatgaagaaaattgtggacgctgtcataaaatacaaa
gacagcaccagcgggcgtcagctgagcgaggtgttcatccagctgccgtctcgaaaagag
ctgccagaatattacgaactaatccgcaagccagtggacttcaggaagatcaaggagagg
attcgaagtcatcgttaccgcagcctgggtgacctggaaagagacgtcatgctgctcttc
caaaacgctcagaccttcaacctggagggctccctgatttatgaagactccatcgttctc
cagtcagtgttcaccagcctgaagcagaagatcgagaaggaggaggagagtgatggagag
gagagcgaggaagaggaggaggagcaggaggacggctcagagtctgaatcgcgctctgtg
aaggtgaaaatcaggctgggcaggaaggagaaaggtggcgatcgagggaaaggtcgcagt
aggcggtcaggacggactcgagccaaacctgtggtcagtgacgacgactccgaggacgag
caggaagaggagcgctctcccagcggcactgatgaagactcctaa
DBGET
integrated database retrieval system