KEGG   Nematolebias whitei (Rio pearlfish): 119430356
Entry
119430356         CDS       T08042                                 
Name
(RefSeq) transcription activator BRG1
  KO
K11647  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
nwh  Nematolebias whitei (Rio pearlfish)
Pathway
nwh03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:nwh00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    119430356
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nwh03021]
    119430356
   03036 Chromosome and associated proteins [BR:nwh03036]
    119430356
Transcription machinery [BR:nwh03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     119430356
Chromosome and associated proteins [BR:nwh03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    REST complex
     119430356
  Chromatin remodeling factors
   BAF complex
    119430356
   PBAF complex
    119430356
   GBAF(ncBAF) complex
    119430356
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C SnAC HSA Bromodomain BRK QLQ ResIII HDA2-3 DEAD
Other DBs
NCBI-GeneID: 119430356
NCBI-ProteinID: XP_037553690
LinkDB
Position
3:complement(1613267..1639514)
AA seq 1554 aa
MDSMHEKGLSEESRFSQMKGMSMRAGGHSGMGPPPSPLDQHSQGYHSPLGGSDHSSPVAS
NGPPSGPLMPSSSSSSSSVGPGSSSASLDGPSGDQHSLGPNNRPGPPGSSGPVPSSGPGL
GSGVSSLGSGLENSGSTGPGGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGK
RPMPGMQQQPMTNLVPGAAGGPGGAPTGPGPGPMGSGYSRAHGMMGPNMPPPGPSGTPAG
MQGPNPNGPPKSWPEGPMVNAAAPSNAPQKLIPPQPTGRPSPAPPSVPPAASPVMPPQTQ
SPGQPAQPPPMMPYHAKQNRITPIQKPCGLDPVEILQEREYRLQARIAHRIAELENLPGS
LAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALDAKAYKRSKRQSLREAR
ITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSITGKIQKLTKAVATYHANT
EREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRAH
KAAQALKEKKKKKKKKKKLENAEGQTPALGPDGEPLDETSQMSDLPVKVIHVDSGNILTG
VDAPKAGQLETWLEMNPGYEVAPRSDSEDSEDEEEEEEDEEESQPSSAPVEEKKKISDPD
SEDVSEVDVQHIIEHAKQDVDDEYSGAAFARGLQSYYAVAHAVTEKVDKQSTLLINGQLK
QYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTL
SNWVYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKQVLAKIRW
KYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVLLTGTPLQNKLPELWALLNFLLPTIFKS
CSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKGKGG
TKTLMNTIMQLRKICNHPYMFQQIEESFSEHLGFSGGIVQGPDLYRASGKFEVLDRILPK
LRATNHKVLLFCQMTSLMTIMEDYFAYRSFKYLRLDGTTKAEDRGMLLKTFNDPESEYFI
FLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVE
EKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEVWGQEVMNEEDEV
PDDETVNQMIARSEEEFEQFMRMDLDRRREEARNPRRKPRLMEEDELPTWIMKDDAEVER
LTCEEEEEKMFGRGSRQRKEVDYSDSLTEKQWLKAIEEGTLEEVEEEVRHKKTTRKRRRD
RDLDHPGPSGSSGSRGRGDRDDDGKRQRKRGRPPVEKLSPNPPSLTKKMKKIVDAVIKYK
DSTSGRQLSEVFIQLPSRKELPEYYELIRKPVDFRKIKERIRSHRYRSLGDLERDVMLLF
QNAQTFNLEGSLIYEDSIVLQSVFTSLKQKIEKEEESDGEESEEEEEEQEDGSESESRSV
KVKIRLGRKEKGGDRGKGRSRRSGRTRAKPVVSDDDSEDEQEEERSPSGTDEDS
NT seq 4665 nt   +upstreamnt  +downstreamnt
atggactccatgcacgagaagggcctgagtgaggagagccgcttcagtcagatgaagggg
atgtctatgagagcaggggggcacagcggtatgggccccccacccagtcctctggaccaa
cactcacagggctaccactctccattagggggttctgaccactccagtcctgttgcatct
aatggacccccatctggtcccctaatgccatcatcttcatcctcctcctcttccgttggt
cctgggtcttcctcagcctccttagacggccccagtggagaccaacactccttggggcct
aataacaggcctgggcctccaggtagttctggaccagtcccaagctctggaccaggtcta
ggctctggtgtctctagtcttggctctggtcttgaaaacagtggctctactggtcctggt
ggcccaactcccttcaaccagaaccagctccatcaactcagagcccagatcatggcttat
aagatgctagcccggggccaacctctgccggatcatctccaaatggccgttcaaggaaag
aggccgatgccagggatgcagcagcagcccatgaccaacttggtccctggagctgctgga
gggccaggaggtgctccaacaggaccagggcctggaccaatgggctcaggctacagccga
gctcacggaatgatggggcccaatatgcctcccccaggtccatcagggacaccagctgga
atgcaaggaccaaacccaaatggacctccaaagtcctggcctgaaggtcccatggtgaac
gcagcagccccctctaatgcgcctcaaaaactgatcccccctcagcccacgggcaggcct
tcccctgccccgccttcagttcccccagctgcttcgcctgttatgcccccacagacccag
tcccctggtcagccagcacagcctcctcccatgatgccttaccacgccaagcagaaccgc
atcacacccattcagaagccctgcggcctcgaccccgtggagatcctgcaggagagggag
tataggttgcaggctcggatcgctcatcgcattgctgagctggagaaccttcccggttct
ttagctggtgatttacgcaccaaagctacgatagagctcaaagctctccgcctgcttaac
ttccagagacagctgcgtcaggaggtggtggtgtgcatgaggcgcgacacggctctcgag
acggcacttgatgccaaggcctacaagcgaagcaaacgtcagtctctgcgggaggctcgc
atcacagagaaactggagaagcagcagaagattgagcaggagcgcaaacgtaggcagaag
catcaggagtacctcaacagcatcctgcagcacgccaaagacttcaaggagtatcaccgt
tcaatcacggggaagatccagaagctgaccaaagctgtggccacctaccacgccaacacg
gagcgagagcagaagaaggagaacgagcgtatcgagaaggaacgaatgaggaggctcatg
gctgaggatgaggagggttaccggaaactgatcgaccagaagaaggataagcgcctggcc
tacctgctgcagcaaactgacgagtacgtcgccaacctgacggagctggtccgagcccac
aaagctgctcaggccctgaaggagaagaagaagaagaagaagaaaaagaagaagctggag
aacgcagagggacagactcctgctctggggcctgatggagagcctctggatgagacgagc
cagatgagtgacctgcctgtgaaggtcatccacgtggacagcgggaacatcctgaccggt
gtggacgctcccaaagctggacagctggagacctggctggagatgaaccctggttacgag
gtagctccacgctcagacagtgaagacagtgaagatgaggaagaggaggaggaggatgag
gaggagtctcagccttcgtcagctccagtcgaggaaaagaagaagatttcagacccggac
agtgaagatgtgtcagaggtggatgtccaacatatcattgagcatgccaaacaggacgtg
gacgatgagtacagtggtgcagcgttcgctcgaggacttcagtcctattacgctgtggct
cacgctgtcacagagaaggtggacaaacagtccactctactgataaatgggcagcttaag
cagtaccagattaaaggtctcgagtggctggtttctctttacaacaacaacctaaatggg
atcctggctgatgagatgggtctggggaaaaccatccagaccatcgctctcattacatac
ctcatggagcacaaacggctcaatggaccctacctcatcattgtacccctatcaacttta
tctaactgggtgtacgagttcgacaagtgggccccgtcagtggtgaaagtgtcctacaag
gggtctcctgctgctagaagagcctttgtccctcagcttcgcagcggcaagtttaatgtt
ttactcaccacttatgagtacatcatcaaggacaagcaagtgctggccaagattcgctgg
aagtacatgattgtggacgaaggacaccgtatgaagaaccaccactgtaaactgacccag
gtcctgaacacccactaccttgctccaagacgagtcctgctgaccgggactccgctgcag
aacaaactacctgagctgtgggcacttctcaacttcctgttgcccaccattttcaagagc
tgcagcaccttcgagcagtggttcaatgctccttttgccatgactggagagaaggtggac
cttaatgaggaggagaccatcttgattattcgccgcctacacaaagtgctacgccccttc
ctgttacggagattaaagaaggaagtggaggcacagcttccagagaagggaaaaggaggc
acaaagacactgatgaacaccatcatgcagctgaggaagatctgcaaccatccttacatg
tttcagcagatcgaggagtccttctctgaacatttagggttctccggtgggatagtccag
ggccctgacctgtatcgagcatcgggaaagtttgaagtgttggatcgaatcctgccaaag
ctaagagccaccaaccacaaggtgctgctcttctgtcagatgacctcgctcatgaccatc
atggaggactacttcgcctaccgcagcttcaagtacctgcgcctggatggcaccacgaag
gctgaagacagagggatgttactgaagacattcaatgacccagagtcggagtactttatc
tttctcctgagcacacgagcaggaggtctcggtctgaacctgcagtctgccgacactgtg
attatttttgactcggactggaacccacatcaggacctgcaggctcaggaccgagcccac
cgcatcggtcagcagaacgaggtgcgcgtgctgcgtctctgcacagtcaatagtgtggag
gaaaaaatcctggcagcagctaaatacaaactcaacgtggaccagaaggtcattcaggct
ggcatgtttgaccagaagtcttccagccacgagcgcagggccttcctgcaggccatcctg
gagcacgaggagcaagacgaggtctggggtcaagaagtcatgaatgaggaggacgaggtg
cccgatgatgagacggtgaaccagatgatcgccaggagtgaagaagagtttgagcagttc
atgcgcatggatctggacaggcgtcgcgaagaggcccgcaacccccggcgaaaaccccgc
ctgatggaggaggacgagctgcccacctggatcatgaaagacgacgctgaagtcgagcgg
ctgacctgcgaggaggaggaggagaaaatgtttgggcgaggttctcggcagcggaaggag
gtggactacagcgattccctgacagagaagcaatggctcaaggcgattgaggaaggcacg
ctcgaggaggtggaggaagaagtgcgccacaaaaagacgacccgcaagaggaggcgggac
cgtgacctggatcaccctggtccctccggttcctctgggagccgaggacgaggggacaga
gacgatgacgggaagaggcagaggaagaggggacgcccaccggtagagaaactgtccccc
aatcccccctccctcacaaagaagatgaagaaaattgtggacgctgtcataaaatacaaa
gacagcaccagcgggcgtcagctgagcgaggtgttcatccagctgccgtctcgaaaagag
ctgccagaatattacgaactaatccgcaagccagtggacttcaggaagatcaaggagagg
attcgaagtcatcgttaccgcagcctgggtgacctggaaagagacgtcatgctgctcttc
caaaacgctcagaccttcaacctggagggctccctgatttatgaagactccatcgttctc
cagtcagtgttcaccagcctgaagcagaagatcgagaaggaggaggagagtgatggagag
gagagcgaggaagaggaggaggagcaggaggacggctcagagtctgaatcgcgctctgtg
aaggtgaaaatcaggctgggcaggaaggagaaaggtggcgatcgagggaaaggtcgcagt
aggcggtcaggacggactcgagccaaacctgtggtcagtgacgacgactccgaggacgag
caggaagaggagcgctctcccagcggcactgatgaagactcctaa

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