Nematolebias whitei (Rio pearlfish): 119430360
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Entry
119430360 CDS
T08042
Symbol
grin3bb
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04020
Calcium signaling pathway
nwh04080
Neuroactive ligand-receptor interaction
nwh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
119430360 (grin3bb)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119430360 (grin3bb)
04082 Neuroactive ligand signaling
119430360 (grin3bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nwh04040
]
119430360 (grin3bb)
Ion channels [BR:
nwh04040
]
Ligand-gated channels
Glutamate (ionotropic)
119430360 (grin3bb)
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
DUF6719
Motif
Other DBs
NCBI-GeneID:
119430360
NCBI-ProteinID:
XP_037553693
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All DBs
Position
3:1980885..2022644
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AA seq
1230 aa
AA seq
DB search
MSFRSLCFWFRTLRTLVLLLVPPCLLHPDPCHLQARTGRAVRVGALLPAQRGARVHVQAA
LNRAAAALSRDPDPDLDPDPERINFLPYNLSLELVSRQVPAADPESLLRCVCERVLDQGV
SAMLVFPQNRAELLQVDLVSSVLGIPFISVIEHGEPLRAQNRFHLQMMTRVPESVLSNLL
LTVLQRSGWREGTVILCRGWEEAHGLLQLLDTQSFASWDNVGGASWHMRALLNLTQSAHD
DTQIRDFLSRHFKQNQALPASVLLFGADPQCAAAVLRSAQDLGLTLPMVHWVLGQPLSPD
VLHTIGLPLGLLAYGEVDQKPLEFYIKDALQLFTRAVAAASVVRPDLARVRNMVTCSSKP
EVTASGDLLSRFLINSSFSGFTGPVEVQQNWSQVLTFQRYHIWSLRRDALGQPTWVTVGS
WDGDQLLVEDQEVWHGPKHHFREEGSEWTGGRWRPGMPVAGNRVRVVTLVEHPFVFTRDV
DDDGSCPAGQFCLDAGTNRSVTLEQYFRGVAGGNDTSLPLESRKCCYGYCIDLLEKLAED
MGFNFDLYIVGDGKYGAWKGGRWTGLVGDLLHGLADMAVTSFSINSARSQVIDFTSPFFS
TSLGILVRSKDTAAPIGAFMWPLHWSMWVGIFLALHITALFLTLYEWKSPFGMTPHGRNR
VRVFSYSSALNLCYAILFGRTVSSKIPKCWTGRFLMNLWAIFCLLVLSSYTANLAAVMVG
EKTFEEVSGIHDAKLHHPSQGFRFGTVRESSAEDYMKKSFPEMYEYMRRFSKPTTPEGVD
TLKTDPPQLDAFIMDKALLDYEVSIDADCKLATVGKPFAIEGYGIGLPQGSPLSSNISEF
ISRYKSDGYMDLLHDKWYKVVPCGNRVFAVTETLQMGISHFSGLFLLLCIGVGGALLTLA
GEHGFYRLVLPHIRRRQNLKYWLHTSQKIHRALNMTYEDVKRQRAEKEKSCNLQKTQTSP
GPPGPLGPPKAPTSGASAQGNISSKDAPAATIEARDFRRVQFSLETLNTRRLLARLASSD
TKGAGAKSNSSESAKPRVGEINSLYENGGPAASFASLVLSRTTSSSARPSAPPPVSKAPP
TMSKAPPPVSKAPPPVSKAPHPVSEAPLTVSKAPPPVSKTPPTPGELQELQEQIEQMREK
LRVALARRAEIQTTLAKPVGMVNNSPPPVTMTTKDNLPTVLPTVTAPPAPVSAPPALSPN
KKSVTTMTNPPHKVLSKVPPLRSKLANQRR
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcaggtctttgtgcttctggttccggacgctccgaaccctggtcctgctcctg
gtccccccctgcctccttcacccggatccgtgccacctccaggctcggaccggacgcgcg
gtccgggtcggtgcgctcctgccagcccagcgaggtgcgcgcgtgcatgtgcaagcggcg
ctgaaccgcgctgcagccgcgctgagccgggacccggacccggacctggacccggacccg
gagcggatcaactttcttccctacaacctgagcctggagctcgtgtcccggcaggttccg
gccgcggacccggagtcgctgctccggtgcgtgtgtgagcgcgtgctggatcagggagtg
tccgccatgctcgtcttcccacagaaccgggccgaactgctacaggtggacctggtgtcc
tcggtcctgggaatccccttcatcagcgtcatcgagcacggagagccgctgcgcgcgcag
aaccggttccacctgcagatgatgaccagggttccagagtcggttttgtccaatttgctg
ctgacggttctgcagcggtccggttggagggaggggactgtgattctgtgccgtggctgg
gaggaggctcacggccttttgcagctcctggacactcaaagctttgcatcatgggacaat
gtaggcggggcctcctggcacatgcgggccctcctgaacctgacgcagtcggcccacgac
gacacacagatccgtgatttcctgtcccgacacttcaaacagaaccaggccttgccggca
tcggtgcttctgtttggtgctgacccacagtgtgctgcagcagtgctgcgcagcgctcag
gacctcggtctgaccttacccatggtgcactgggtgctgggccagccactcagcccagat
gttttgcacaccatcggactgccactcggcctgctggcctatggagaggtggaccagaaa
ccactcgaattctacatcaaagatgccctgcagctcttcaccagagctgtcgcagcagca
tccgtggtgaggcccgacctggcccgggtccgaaacatggtgacctgctccagtaaacct
gaggtgacagcatcaggagacctcctgtccaggtttctgatcaactcatctttttctgga
ttcacgggtccagttgaagttcaacagaactggtctcaggttctgacctttcagcggtac
cacatctggagcttgcggcgggatgcgctgggtcagcccacctgggtgacggttggcagc
tgggacggggaccagctgctggtggaagatcaggaggtgtggcatggacccaaacaccac
ttcagggaagagggcagcgagtggaccgggggccgctggaggcctgggatgccggtggca
gggaatcgggtccgggtggtgacactggtggaacatcccttcgtgttcacacgagatgtg
gatgatgatggcagctgcccagcaggtcagttctgcttggacgctggcaccaacaggtca
gtgactctggagcagtactttaggggcgtggcaggcgggaacgacacctcactccctctg
gagtccaggaagtgttgctatggatactgcattgacctgctggagaagctggccgaggac
atgggcttcaacttcgacctttatattgttggagacgggaagtatggggcttggaaaggg
gggcgctggaccggtctggtgggagatcttctgcatggtctggcagacatggctgtaacc
tccttcagcataaactccgcccgcagccaggtgattgacttcacctcaccctttttttca
accagcctggggatcttggtgcgcagtaaggacacagcagccccgatcggagccttcatg
tggccccttcactggtccatgtgggtgggcatcttcctggcactgcacatcacagctctg
tttctgacactgtacgagtggaagagtccgttcggtatgacgcctcacggacgcaacagg
gtgagagttttttcatattcctcagctctcaacctgtgttatgcaattctgtttggacga
actgtgtcctccaagatcccaaagtgctggacaggtcgctttttgatgaatctgtgggcc
atcttctgtctgctggtgctgtccagctacactgccaaccttgcagccgttatggtgggc
gagaagacctttgaggaggtctcggggatccacgatgccaagctccatcatccatcacag
gggttccgttttgggacggtgagagaaagcagtgctgaggattacatgaagaagagtttt
ccagagatgtacgagtacatgagacgcttcagcaaaccaaccacacctgaaggtgtcgac
acactcaagacagatcctcctcagctcgatgccttcatcatggacaaagccctcctggat
tatgaagtttctattgacgctgactgtaagctggcaactgttgggaaaccatttgccatc
gaaggttacggtatcggccttcctcagggctcccctctgagctccaacatctcagagttc
atcagcagatacaaatcagacgggtacatggacctgctgcacgacaagtggtacaaagtg
gttccgtgtgggaaccgagtgtttgctgtcacagagactcttcagatgggcatcagtcac
ttctcaggactctttctgttgttgtgcattggagtgggcggggctttgctgaccctcgca
ggtgaacatggtttttatcgactcgtcctgccacacatccgccgccgacagaacctgaaa
tattggttgcacacctcacagaaaattcatcgagctctgaacatgacgtatgaagatgta
aagaggcagcgagctgaaaaagagaaaagctgcaacctgcagaaaacccaaacttctcca
ggacctcctggtccactgggtcccccaaaggccccgacgtctggagcctcagcccagggg
aacatcagcagcaaagatgcacctgctgccaccatagaggctcgagacttcagacgtgtt
cagttcagcctggaaaccctcaacactcgccgcctgctcgcacgccttgcatcttctgat
actaagggggccggggctaagagcaacagcagtgagtcagccaagccaagagtgggggag
atcaacagcttgtatgagaacggaggaccagctgcttcctttgccagcctggtgctttca
cgcaccacctcttcctctgctcgacccagcgcccctccccctgtgtctaaagccccaccc
actatgtctaaagcccctccccctgtgtctaaagcccctccccctgtgtctaaagcccct
catcctgtgtctgaagctcccctcactgtgtctaaagcccctccccctgtgtctaaaacc
ccacctactccaggggagctgcaggagctgcaggaacaaatcgagcaaatgagggagaag
ttgagggtggctttggctcggagagcagagatccagactactctggcaaaacctgttggc
atggtaaacaacagtccccctccggttaccatgacaacaaaagacaacctgcccacagtc
ttacctactgtcactgcaccaccagcccccgtcagtgctccaccagccctctctcccaac
aagaagagtgtgacaaccatgacaaatccaccgcacaaagtcctgtccaaagtcccgcct
ctccgcagcaaattggccaatcagagaaggtga
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