Nematolebias whitei (Rio pearlfish): 119430361
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Entry
119430361 CDS
T08042
Symbol
trmt13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nwh03016
]
119430361 (trmt13)
Enzymes [BR:
nwh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
119430361 (trmt13)
Transfer RNA biogenesis [BR:
nwh03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
119430361 (trmt13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
Motif
Other DBs
NCBI-GeneID:
119430361
NCBI-ProteinID:
XP_037553695
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All DBs
Position
3:2105902..2111873
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AA seq
478 aa
AA seq
DB search
MAAPGRCGFFVQKKNRFCKMVVGKGKQFCGEHATMEEVGGSKRIPCPLDPKHTVTKDKLE
KHLKKCNSREKPRAVYFVKNINAGPSGGDENIPQVGLSERSRAELESLVDKLKTAVQGLQ
WDVEDKILSHLVLQDELTNPKNGDSAHKHLKQQTSILGHLEDLGLLRRGRCFVEFGAGRG
KLSHWIHEALKTHEILKTHEDMKTQEDLQLLLVERSSTRFKVDGKHQDTRAEFERLQVDI
QHLDLRKVPLLQQKKLPLVGVGKHLCGAATDLALRCLLETSKVREETEPAPKRLRSSEPS
EPRSGEDPETPEPGSGIGPVLGLAVALCCHHRCEWRHYVGQRFFLQNGLGPAEFSAFCRM
SSWATCGLRPANQDCPSQDPTNQRAELEGHEPADETDAVSWLSSAEERQQVGRLCKLLID
SGRLDFLKTEGFSGKLTRYVEPQVTLENMLLTAVTAEPGSDSCTLLFLCCVLMFDGKN
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccccggcaggtgcgggttcttcgtgcagaaaaagaatcggttctgtaaaatg
gtcgtcgggaaagggaaacagttctgcggagaacacgcgaccatggaggaagtgggcggc
agcaaaaggatcccctgtcctctggaccccaaacacacagtgactaaagacaaactggag
aaacatctgaagaaatgtaactcaagagaaaaaccaagagctgtttattttgtcaagaac
atcaatgctggtccatctggtggagatgagaacattcctcaggtgggtctctctgagcgc
agcagagcagagttggagtctctggtggacaaattgaagacagctgttcagggactgcaa
tgggacgtggaggacaagattctgtctcacctcgtcctccaggatgaactgaccaaccca
aagaatggagactccgcccacaaacacctgaagcagcagacctccatcttgggtcacctg
gaggatctggggctgctcaggcgtggacgctgctttgtggagttcggagcaggacgaggg
aagctctctcactggatccacgaggccctgaagacccacgagatcctgaagacccacgag
gacatgaagacccaagaagatcttcagctgctgctggtggagcgctccagcactcgcttc
aaggtggacgggaagcatcaggacaccagagcagagtttgagaggctgcaggtggacatt
cagcacctggacctgaggaaagtcccgctgctgcagcagaagaagcttcctttggtcgga
gttgggaaacatttgtgtggagcagcaacagatttggctctgcgctgcttactggaaaca
tctaaagtcagagaggaaacagaaccagctccaaaacgcctcagatcatcagaaccatca
gagccaaggtcaggtgaggatccagagacaccagaacctggttctggtatcggtccggtg
ctaggcctggcagtggcactgtgctgccaccatcgctgcgagtggcgtcactatgtgggt
cagcggttcttcctgcagaacggacttggacctgcggagttttctgccttctgtcggatg
tccagctgggccacatgtggactcagaccggccaatcaggactgcccgtcacaggatccg
accaatcagagagcagagcttgaaggacatgaaccagcagacgagacggacgctgtcagc
tggttgtcctcagcagaagagcgacagcaggtcggtcgtctctgtaagttgttgattgac
agcggcagacttgacttcctgaagactgaaggcttcagcggcaaactgactcgatacgtg
gaacctcaggtgactctggagaacatgttactgacagctgtgactgcagaacccggttct
gacagctgcacgctcctcttcctctgctgcgttctgatgttcgatggtaaaaactaa
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