Nematolebias whitei (Rio pearlfish): 119430434
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Entry
119430434 CDS
T08042
Symbol
ushbp1
Name
(RefSeq) colorectal mutant cancer protein
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
nwh03037
]
119430434 (ushbp1)
Cilium and associated proteins [BR:
nwh03037
]
Primary cilia and associated proteins
USH complex and associated proteins
119430434 (ushbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
ANIS5_cation-bd
Motif
Other DBs
NCBI-GeneID:
119430434
NCBI-ProteinID:
XP_037553768
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All DBs
Position
3:10464969..10474427
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AA seq
695 aa
AA seq
DB search
MEDSRRSRCNSLDTSSVFKKELLIPGNYETFDPEGSDPLINLEPTPAEVAQCEAEVGLLL
SFIADLNKKMGSLKAPSEPGDLRSPSPSRPLVPDLLSHRLVRSSPDRNAASIITSKHPLT
NQGGGVVWTKLEEVLSSVEDSISFRRTWAAPITASDQNKHKEHLRAAQENWAKATQILEE
MEKDFGISCPSGMPKDPNLDNLLDAEKPEAVPRNTLQEGLQRTPGSVCPSEEEINKLTGL
HKVWRSGSLSPSYRPPSGARSPDWASPSYPGSPLPYRRTSRAVKPLSLGGDGCLGSVTSN
SPCPSPIGLESETERLNRCIERLKARNERLTAALERRKAESEQISLKLNRLETDCSALQL
LLRYSEECEEAYSELLSLYETKRQQSSPLQTDSAEPVGDKQQADSPSAQLRKMGTEELST
SFSTTGVIEATQAQSHTSPTSQRTPDPVDREVALRQQIKRLRKERAAICLPKPDLGAESR
PRSETCPTVGTSWGHVPKDNAKPPENKREKASLFYELISVREEMSDLRALIRLKEKDLRC
LEWSLMGQKSQGAAGVFIPESLREEAEQQRFCENAAKVGCDGELSPLTRSIFKDLQAVLQ
REQALKKRLGMIHDSLTTALTDGAPNRKDNAEQIARLTQAHSKALSSYRQIRRKYREQVW
RLEQKVAAMMERHNQSEATKDAEEAAEWKREETVL
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggaggactccagacggagcagatgtaacagcctcgacaccagctcagtttttaaaaag
gagctgctgatcccaggaaactacgaaaccttcgaccccgagggctccgaccctctgatt
aacctcgagcccacgccagcagaggttgcacagtgcgaggctgaagtgggcctcctgctc
agcttcatcgctgatctgaacaagaagatgggctcactaaaggctccgagtgaaccaggt
gatctgagatcaccaagtccatccaggcctctagttccagaccttctgtctcaccgtctg
gtcaggagcagcccagacaggaatgctgcgtccatcatcacatctaaacacccactgacc
aaccaaggcggaggtgtcgtctggaccaaactggaggaggttttatcatcagtggaagac
tccatcagctttaggaggacatgggctgctccaatcacagcctctgaccagaacaaacac
aaagagcacctgagagcagctcaggaaaactgggctaaagccactcagatactggaggag
atggagaaggattttgggatctcatgtccgtcaggcatgccaaaggacccgaacctggac
aacttgttggatgcagaaaaacccgaggctgttcccagaaacactctgcaggaagggttg
cagagaacaccaggctcagtctgtccttcagaagaggagataaacaagctgacgggcctc
cacaaggtctggaggtctggcagcttgtctccttcttacaggcctccttctggggctcgc
agtccagactgggcttctccttcctaccctgggtcacctttaccctacagaaggacgtct
cgagcagtaaaacctctgtctttgggcggggacgggtgtctgggctccgtcacctcaaac
agtccgtgtcccagccccatcggtctggagtctgaaacagagcgactgaacagatgcatt
gagaggctgaaggccagaaacgaacgtctgaccgcagctctggagcgaaggaaggccgag
tcggagcagatcagcctgaaactaaaccgactggagaccgactgctcggccctgcagctg
cttctcagatacagtgaggagtgcgaggaggcctacagtgaactgctgtcactttatgag
accaaaaggcagcaaagctctcctctgcagacagactcagcagaaccagtcggtgacaag
cagcaggctgacagtccatcagctcagctcaggaaaatgggaactgaagagttgtccacc
tccttctccacaacaggagtcatagaagcgacacaggcacaaagtcacacaagtccaaca
agtcagaggacacctgacccagtggatcgggaagtagctctccggcaacaaattaagcgc
ctgaggaaggagcgagcagccatttgtctgcctaagccggatctgggagcagagagcaga
ccacgctcagagacttgtccaacagttgggacaagctggggccatgtgccaaaggacaac
gccaaacctcctgaaaacaagagggagaaagcttccctcttctacgaactcatctcagtc
agggaggagatgtcagatctgcgggctctgatccgcctgaaggagaaggacctgaggtgt
cttgagtggagtttaatgggtcagaagtcccagggagcagcaggagtttttatcccagag
agtctcagagaggaggccgaacagcagagattttgtgagaatgctgccaaagttggctgc
gacggagaactcagtcctctaaccagatccattttcaaagacctacaggcagttctacag
agggaacaggcactgaagaagaggctggggatgatccatgactctctgaccacagctctg
acagacggcgcccccaacaggaaggacaacgcagagcagattgctcgcctcacacaagct
cacagcaaagccttgagctcgtaccgacagattcgcaggaagtatcgtgagcaggtgtgg
aggctggagcagaaggtggcagccatgatggagaggcacaaccagagtgaagcaactaaa
gatgcagaagaagctgcggagtggaagagagaagagactgttttataa
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