Nematolebias whitei (Rio pearlfish): 119430521
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Entry
119430521 CDS
T08042
Symbol
sox2
Name
(RefSeq) transcription factor Sox-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nwh03000
]
119430521 (sox2)
Transcription factors [BR:
nwh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
119430521 (sox2)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
119430521
NCBI-ProteinID:
XP_037553869
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All DBs
Position
3:8106355..8108543
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AA seq
322 aa
AA seq
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MYNMMETELKPQAPQTNTGGTGNTNNSGNGANQKNSPERVKRPMNAFMVWSRGQRRKMAQ
ENPKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMK
KDKYTLPGGLLAPGGNGMGTGVGVGVGAGLGGGVNQRMDSYAAHMNGWTNGGYGMMQEQL
SYQHPGLNAHNPSQMQSMHRYDMSALQYNSMTSSQTYMNGSPTYSMSYSQQSTPGMTALG
SMGPSSVVKSESSSSSPPVVTSSSHRAAPGCQSGDLRDMISMYLPGAEVSDQSGQTRLHM
SGHYQSTVPGTTINGTLPLTHM
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggagactgaactgaagccccaagctccccagaccaacacggggggc
acgggcaatacgaacaactccggcaacggcgccaaccagaaaaacagtccggagcgggtc
aagagacccatgaacgcgttcatggtgtggtcccggggccagaggaggaagatggcgcaa
gaaaaccccaaaatgcacaactcagagatcagcaagaggctgggggctgagtggaaactt
ctgtcggagagtgagaagagacctttcatcgatgaagccaagaggctgagggccctgcac
atgaaggagcatccggattacaaataccggccccggcggaaaaccaagaccctcatgaag
aaggacaagtacaccctgcccggcgggctgctggctcctgggggcaacgggatggggact
ggtgtcggtgtcggtgtgggggccggactgggcggtggggtgaaccagaggatggacagc
tacgcggcgcacatgaacggctggaccaacgggggctacgggatgatgcaggagcagctg
agctaccagcacccgggtctgaacgcgcacaacccgagccagatgcagtccatgcaccgc
tacgacatgagcgcgctgcagtataactccatgaccagctcccagacctacatgaacggc
tccccgacctactccatgtcctactcccagcagagcacgccggggatgaccgccctgggc
tccatggggccctcctcggtggtgaagtcggagtccagcagctccagcccgcccgtcgtg
acctcctcgtcccaccgggccgcccccggctgccaaagcggggatctgagggacatgatc
agcatgtacctgcccggggccgaggtgagcgaccagagcggccagaccaggctacacatg
tccgggcactaccagagcaccgtgcccgggacgacgatcaacggcacgctgcccttaacg
cacatgtag
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integrated database retrieval system
