Nematolebias whitei (Rio pearlfish): 119430529
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Entry
119430529 CDS
T08042
Name
(RefSeq) contactin-associated protein-like 5
KO
K24337
contactin associated protein-like 3/4
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
nwh04990
]
119430529
Domain-containing proteins not elsewhere classified [BR:
nwh04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
119430529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
F5_F8_type_C
COLFI
EGF_2
Motif
Other DBs
NCBI-GeneID:
119430529
NCBI-ProteinID:
XP_037553881
LinkDB
All DBs
Position
1:68777867..68859091
Genome browser
AA seq
1350 aa
AA seq
DB search
MLFLDYNSVFNTIRPGKQIEKLTDLGVSTPTCNWILDFLTDRPQMVRIGGQVSNKLIIST
GSQQVLLKHYKMDFQVFPGNSNANSVVQHKLQHPAIARYVLLIPLDWNPNGQIGLRLEVF
GCPYNSDTVSFDGHSSLFFRLNPRMMQATTESISLKFKTMKNSGTLFHTEGPNEHGLTLA
LEKGKLLLLLRKGRSLSLNTQHVVSLGSLLDDQYWHQVAVEIHRGHLNLTVDKSTTWVEI
PPWFGFWDHDQVNVGAGQDLKSQRSNRNFHGCLENLIYHGLNLVALTKQEDQRVTVKGEV
TFSCTEPVFVAMTFTGHQSFLRLPGGTGPSVGTSVGLQFRTWDREGLLLTFELSKQEGTV
WLHLSEASLHLQIHKPGRMPLELKAGWSLSDGQWHSVDLTSGAEHLSVTVDGNEGTTAKA
SPSYQVTPGSQLFFGGCPADNSTLECTNPFRAFQGCLRLLTINNQPVDLVKVQQRRMGDY
SNLQIDMCGIIDRCSPHHCEHGGSCSQLWSTFHCNCSGTGYSGATCHSSIYEQSCEAYKH
KGNTSGHYYIDVDGSGPIKPQMVFCNMTEDKTWMVIQHNNTELTKIHQSPEGSHYSTTFK
YAADEEQLLAIISQSEHCEQEVEYHCRKSCLFNTSEGFPLSWWVGGPDTGQKQTYWDGAL
PGSQQCTCSLEENYTDPKQHCDCDVDSSAWVNDSGLLTHKESLPVRSLVLGDIQRPGSES
AYKVGPLRCHGDKNIWNAALFNEETSYLHFPTFHRELSSDFSFLFKTTSSSGVFLENLGI
RDFLRIELSSSTDVLFSFDTGNGPLQVRVKAGFPLNDDRWHRIRAERNVKEASLRIDELP
AAMQEAPADGPIHLQLNSQLFIGGTASRQKGFRGCIRALQRNGVPLDLEERARITPGVQT
GCPGHCSSYGSLCQNSGQCVEEIKSFSCDCSPSAYTGAFCDEEVSVSFKPQTSISYFFTE
QKVNEPSIRSFSSTVPDLILRAENISLSFRTNQSPALLLCLASYHGQYLALLLNKQDMLE
VRYRLDSSKDAEILRSKVKNLANQQLHDITIHRLADTVTLQIDQNDKEHFNLTSGAEFNG
AGSLTLGRKHNFAELDRELAQLGSLGFTGCLSAVLFNSISPLKAALLHPNISPVVVSGPL
IRSSCGFTSANPYTAETTRHLSDQSGSERAGQPVVNAIRSESVLIGGIVALAIFGMMFAL
VILARFLYRRKGTFQNQEVKKTEDTSGLPFTKQTCLQNGMKHSVLPEGRSEQSMFRRDEF
KEHAGSCPAPGGINVPGRCVGVGASGEYAAQMYPEVPDRGDHLHHCSIDIEWEGSIASPA
EIHYHLLGLLEVDDEVVPVPALQALHLPPV
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atgctcttcctggactacaattcagttttcaataccatccgcccaggcaaacagatagag
aagctgacagaccttggcgtctcgactcccacctgtaactggatcctggacttcctgaca
gatagaccacagatggtgagaataggaggacaggtgtctaataaactcataatcagtaca
ggttcccagcaggtattactgaaacattacaaaatggattttcaggtatttcctggcaac
agtaatgcaaacagtgtggtccagcacaaactccagcaccctgcgattgctcgatacgtc
cttctgattcctctggactggaatccaaatggtcagattggactcaggctggaggttttt
ggatgtccttacaattcagacacagtgagctttgatggccacagcagccttttcttcagg
ttgaatccaaggatgatgcaggcaaccactgaaagcatttctctgaaatttaaaaccatg
aaaaactctgggacactttttcacacagaaggaccaaatgaacatggcctcactctggcg
ttagagaaaggaaaacttctccttctgctcagaaaaggtcgcagtttgtccctgaacacc
cagcacgtcgtgtctcttggcagcctgttggatgaccagtattggcaccaggttgcagtg
gagattcacagaggtcacctcaacctcactgtggacaaaagcactacgtgggtggaaatc
ccaccttggtttggcttctgggatcatgatcaggtgaacgtgggagcaggccaggacctc
aaatctcagagatcaaacagaaatttccacggatgtctggaaaaccttatttatcacggc
ttgaacttggtagctcttactaaacaggaggaccagcgggttactgtgaagggcgaagtg
accttttcctgcactgaacctgtttttgttgccatgacattcactggccaccagagcttt
ttgaggttaccaggaggcacaggtccatcagtgggcacgtcagtgggacttcagtttcga
acgtgggatagagaagggctgctgctgacctttgagctctcaaagcaagaaggaacagtt
tggctgcacctgagcgaagccagtcttcacctacagatccacaaacctggcaggatgccc
ctggaactaaaagcaggttggagcctaagtgatggccagtggcactcagtggatctgacg
tcaggagcagaacatttgagcgtcacagtagatggaaatgaaggaacaactgctaaagcc
agtccttcatatcaggtcacaccaggaagtcaacttttctttggtggttgtcctgcagac
aacagcaccttggagtgcacaaatcctttcagagctttccaaggctgcctgcgcctgctg
accattaacaaccagccggtggatttagtcaaagtgcagcagaggaggatgggagattac
agtaaccttcagattgatatgtgcggcattattgacagatgttctccacatcattgtgaa
cacggaggcagctgcagtcagttgtggagcacctttcactgtaactgctccggcaccggc
tacagcggagccacatgtcacagctcaatttatgaacagtcctgtgaagcatacaaacat
aaagggaacacatcagggcattattacatcgatgtggatggcagtggacccatcaaacct
cagatggtattctgtaacatgacagaggacaagacgtggatggtgatccaacacaacaac
acagaactcaccaaaatccatcaatcgccagaaggaagtcactattcgactacctttaaa
tatgcagcagacgaggagcagcttttagcaatcatcagccaatcggagcactgcgaacaa
gaagtggaataccactgcaggaagtcatgtctcttcaacacatcagaaggttttccactc
agctggtgggttggaggtccagatacaggacaaaagcagacttactgggatggggctctt
ccaggcagtcaacagtgtacctgcagtctggaggagaactatactgatcccaaacagcac
tgtgactgtgacgttgacagctctgcatgggttaatgactctggtttattgacccataag
gagtcacttcctgtcagatctctggtgctgggagatatccaaaggcctggatcagaaagt
gcatacaaggtgggacctctccgttgccatggagacaaaaatatctggaatgctgcactt
ttcaatgaggagacgtcatatctccatttccccacatttcaccgagagctaagttcagac
ttctccttcctgtttaaaaccacatcatcctctggtgtcttcctggaaaacttgggcatc
agagatttcctccgcattgaactcagctcctccaccgatgtcctcttctcctttgatacg
ggtaatggccctcttcaggttcgtgtgaaggctggcttcccgctgaacgacgacaggtgg
catcgcattcgagccgagcgaaacgtgaaagaggcatcactacgcatcgatgaactccct
gctgccatgcaggaggctccggctgatgggcccattcacctgcaactgaacagccagtta
tttataggaggcactgcttcgaggcagaagggttttcgaggttgtatacgcgccctgcag
cggaacggtgtccctctggatctggaggagagagcgaggatcacccccggggtccagacc
gggtgtcctggtcactgcagcagctacggctccctctgccagaactctggccagtgtgtg
gaggaaatcaaaagcttttcctgtgattgtagcccatctgcttacactggagctttctgc
gacgaagaagtctctgtcagctttaaaccacagacatccatcagctacttctttacggag
caaaaggtgaatgagccaagcatccgctccttctcctccactgttcctgacttgatcctg
agagcagaaaacatctccttaagcttcaggaccaaccagagtcccgctttgctcctatgt
ttggcctcttaccatggacagtacctggctctgttgctcaataagcaagacatgctggag
gtgaggtacaggctggacagcagcaaagacgcagagatcctgaggagcaaagtgaagaac
ctcgccaaccagcagctgcatgatattaccatccacaggctggccgacactgtcactctg
cagattgaccaaaatgacaaggagcattttaacctgacatctggtgctgagttcaacggt
gctggctcactgactcttggcagaaagcacaattttgcagagctggatcgagaactggct
cagctcggctctctgggttttacaggttgtctgtctgcagttctttttaactccatcagt
cccctgaaagctgctctactccacccaaacatcagtccagttgttgtcagcggcccactc
atcaggtctagttgtggcttcacttcagccaatccctatacagcagagaccacacgtcat
ctgtcagaccagtctggatcagaaagagcaggtcagcctgtagtgaatgccatcaggagt
gaatcagttctcatcggaggtatcgtagcgctggcaatctttgggatgatgtttgcattg
gtcattctggctcgattcctatacagaaggaaggggacgtttcaaaaccaggaggtgaaa
aaaacagaagacacatctgggctgccattcaccaaacagacctgcttacagaatgggatg
aagcacagtgtcctccctgagggcaggagtgaacagtccatgttcaggagggatgagttc
aaggagcatgcaggctcttgtcctgcacctggtggtataaatgtccctgggagatgcgtt
ggtgttggtgcatcaggtgaatatgctgctcagatgtaccctgaggtacctgacagaggg
gaccatcttcaccactgctccatcgatatagagtgggaggggagcattgccagtcctgca
gaaatccactaccatctccttggtctactggaggttgacgatgaggttgtgcctgtacca
gcacttcaagcccttcacctcccgcctgtatga
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