Nematolebias whitei (Rio pearlfish): 119430580
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Entry
119430580 CDS
T08042
Symbol
syde2
Name
(RefSeq) rho GTPase-activating protein SYDE2
KO
K20655
Rho GTPase-activating protein SYDE
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119430580 (syde2)
Membrane trafficking [BR:
nwh04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
119430580 (syde2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
Motif
Other DBs
NCBI-GeneID:
119430580
NCBI-ProteinID:
XP_037553940
LinkDB
All DBs
Position
3:13610112..13659029
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AA seq
1642 aa
AA seq
DB search
MADPLRRTLLAKLRGKKTKKGATLGGCGGGFGSAAAANGSRGGKEKVLQTQRDLDEALRV
VVLTGMDLTAERMSTYENCVEAEGVTVVPERCAAVASRRTDAQNAFREESRGHRGPGAAA
GSPYVQMKHFVSVPRQRSVGDSIGFGDSSCHVLERAQVQAQHPGALTPAASCVGAGTELR
GLSHMAGTVGAGQESRSNWTFDSGPTLETNSPSCAAAVYPKCAVSAEESVVIRNIESYGP
DCLGDTRETAGSPQSPFFPTELQICDIKRTSLCSTQGSHRYPLDSEDDDYYDNEILPFYE
TARPKTNVDREDIEEPGQDKGQVINCNSAHETDRLRNQLQEAYYLLINAMNDISLDFQQI
GEDLAAQQATSSCSSHSRDSLCSRLSVKNVDSDSWSSGGNHSSQHGSDTESLLLCLTGNL
ESKSRLTSKSMSNLSLTIRPTMLRSASDGAIRYQSKPTSPVQTEAYDDKGASETLKAVVT
KAEGLPEPYVLCSGISSEELRGAGGEEDQAEQLNESSSSVNSLTGSSDSNTEVLATHQDQ
ETKQEQADVRTQVVNSANKAHGVTVNKMQEWMHKGRLLSSEMKQRIEGSSLPRGGGQTQD
RASLQANLRPGTQTCVRGGKSVKTKSSTVKTPRQLQPAFIENFQAPCANGREVSRSSNEA
PSWRPQHTTITVSKKRNWLQQSSQGRGQFSRDELQGVLGAEEEGSQGLHQLPPPPSPSPD
HLRHQGVAPPRPVHLQLPQVTVGQAKVSPHPRSVDPAEENDADDEGEIWYNPIPEDDEPG
TSRQPSVRLLVPPRTESQRRPSRGVDVVQDNMVLEGVSGPEGHVDSLSSGSGDGGLGNAA
HSTEAVHLHRQMLTCKPQEEGSLSSNKPTDALDLPIGFSPPSSPNPTKKCSSINWSFPDK
IKSPRTVRKISMKISRKLSVKGTQSNTTSSSGSSQLEPRAHSPRANRSGSEVVTQTSGPP
RLVSSGGVQSGRNVISRYHLDSSVSTQHSFSKKKSNCSSKSAIKGGYLSDGDSPELVAKS
GKHSSAKGKGGKGKETEGGGTSRLNGTELDIDAFRHYSFTEQPKCSQYISGLMSLHFYGA
EDLKPPRVDSRDVYCAIQVDSVNKARTALLTCRTSFLDMDHTFNIELENAQHLKLVVFSW
EPTPKRNRVCCHGTVVLPTLFRVTRTHQLAVKLEPRGLIYVKLNLMEHWQNSLDGGPNRD
RELQVFGVEVWRVVERENTGLIVPLIISKCINEIEKRGCQVVGLYRLCGSAAVKKELREA
FERDSHAVELCESMYPDINVITGVLKDYLRELPYPLINKPLYEAVLDTMAVRPLKMGAAG
CENDQADSEYTVRLLENLPEVERMTLRKLLDHLKLVASYHEVNKMTCQNLAVCFGPVLLS
QRQEASCHTNRVFIDSEELASALHFKKHIEVLHYLLQLWPVVDPHDQSSCHPPAASVAPA
SSDLLSAPPLRRRKERPQVLNFSEVDMAGVLRPKPGRLDSPSNRYAGDWSTCGENYFPSE
MPPPASKEEVDYDDVPSEDTEATEDVRDKQEDTAEEDKQETVPSSASDPAVQENPQKEEV
VREEENDEEMKDTSNRHSLEEEDAEERRFNHILSPRLPKEHTYQAYMKIQDRGNLRDLQE
SIDTLIGNLERELNKNKLNVGY
NT seq
4929 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcctctgcggaggactttactagcgaaactccgggggaaaaagaccaaaaaa
ggagcgacgctcggcggctgcggcggtggattcggatctgctgcggcggccaacgggagc
cgaggaggtaaagaaaaagttttgcagacgcagcgagacctggacgaggctctgcgggta
gttgtgctcacagggatggatttgacggctgagagaatgagtacgtacgagaattgtgtg
gaagcagagggggtcacggtggttccggagcgctgcgcggcagtcgcttcgcgtcgaaca
gatgcgcaaaacgcgtttagggaggaaagcaggggccaccgggggcccggagccgcagcg
gggagcccctatgtccagatgaaacacttcgtttcggtgccgaggcagcgcagcgtcggg
gactccatcgggttcggggacagttcctgtcatgtgctggagcgagcgcaggtacaggcg
caacacccaggggccctcacacccgcagcgagctgtgtcggtgcggggacagagctcaga
ggattgtcccacatggcaggaactgtgggggctggacaggaaagcaggtccaactggact
tttgacagcggtccaactttggagacaaattctccaagttgcgcagcggctgtgtatcca
aagtgtgcagtaagcgcagaggaaagtgttgtaataagaaacattgagagctatggacct
gactgtttaggggacactagagaaacagcaggcagtcctcagagtccatttttccctact
gagttacaaatttgtgatattaaaaggacatctttgtgctccacacaggggtcccacaga
taccctttagatagtgaagatgatgattactatgataatgaaattttacccttctatgaa
acagctagaccaaaaactaacgttgatagggaagatattgaagaacctggtcaggataaa
gggcaggtgattaactgtaatagcgcccatgaaacagacaggctccgaaaccagctgcaa
gaggcttactacctccttatcaatgccatgaatgatatcagcttagatttccagcagatt
ggagaagatttagcggcacagcaagccacctcttcctgtagtagccactcaagggacagc
ttgtgctccaggttgtctgtcaaaaatgttgacagcgactcctggtcatcaggaggcaac
cacagttctcagcatggatctgacactgaatcgctccttctctgcctcactgggaaccta
gagtcaaagtctaggttgactagtaagagcatgagcaatctgtctttgaccatacggccc
acaatgttgcgctctgcaagtgatggagctatcaggtatcaaagcaaacccacatctcct
gtccagacagaagcctatgatgataaaggagcttcagagacattaaaggctgtggtcaca
aaagccgaagggctgcctgaaccgtatgttctttgcagcggcatcagcagtgaggagcta
cgaggtgctggaggtgaggaggaccaagctgagcagctcaatgagagcagcagctcggtt
aacagcctcacgggttcctctgacagcaacacagaggtattagcaacacatcaagatcag
gagaccaagcaggaacaggctgatgtccgaacgcaggtcgttaactcggccaacaaagcc
cacggagtcaccgtcaacaagatgcaggagtggatgcacaagggtcgcttgctgtcgtct
gagatgaaacagcgcattgaaggctcgtctttgcctcgcggtggaggccagactcaggac
cgggcctctcttcaggctaacctcagaccagggacccagacatgtgtccgtggtggtaaa
tctgtcaagaccaagtcatccacagtgaaaacaccaagacagctgcagccagctttcatt
gagaatttccaagcaccgtgtgcaaatggccgtgaggtgagcagatcatccaatgaggcg
ccttcatggaggccgcagcacaccaccatcaccgtctcaaagaagcgcaactggttgcag
cagagctcccagggaaggggtcagttcagcagggatgagctgcagggagtgctgggagct
gaggaggaaggcagccagggtctccatcagctgccgcctcctcccagtccctctccggac
cacctgagacaccaaggggtagcaccgcctcggccagttcatctacagctccctcaggta
actgttggtcaggctaaggtgtctcctcaccctcggagcgtggacccagctgaagagaat
gacgcagatgacgagggagagatttggtacaacccaatcccagaggatgatgaaccaggg
acgtctcgccaaccttccgttaggctactcgtcccgcctcgaacggagtcccagaggagg
cccagcaggggggtggatgtggttcaagacaacatggtcctggagggtgtcagcggacca
gaggggcatgtggatagcctcagcagcggttcaggagacgggggtctggggaatgctgca
cattccacagaggcagtacatctgcacagacagatgctcacatgcaaacctcaagaggaa
gggagcctttcctcaaacaaacctacagatgctcttgacctgccgattggcttttctccg
ccctcaagccccaacccaaccaagaagtgcagctctatcaactggtccttcccagacaag
atcaagtctccacgtactgtcaggaagatctccatgaagattagccgaaaactcagtgtg
aaagggacccaaagcaacacgacgagcagcagtgggagcagtcagttagagccgagggcc
cattctcctcgggccaataggagtgggtctgaagttgtcacccagacttcaggtcctcct
cgattagtctcatccgggggtgttcagtcgggtcggaatgtgatctcgcgctaccacctg
gacagcagtgtgtctacacagcacagcttcagtaagaagaaaagcaactgcagctcaaag
tctgctattaagggtggctacctgagtgatggtgactcaccagaactggtggctaaatct
ggaaaacacagctctgcaaagggaaagggtgggaaaggaaaagaaactgagggaggtggg
acctcaagactcaacggcacagagctggacattgacgcgttccgtcactacagtttcaca
gagcagcccaagtgcagccagtacatatctggattgatgagtctccatttttatggtgca
gaggacctcaaacctccacgtgttgactctcgagatgtctactgcgcaatccaggttgac
tctgttaacaaagcacgcacggctctcctcacctgccgaacctccttcctagatatggat
cacacattcaacatcgagctggagaacgcccagcatctgaagctggtggtgttcagttgg
gagcccacgccaaaacgcaaccgtgtttgctgccacggcacggtggtgctgcccacgctc
ttcagggtgacgcgcacccaccagcttgctgtgaaactggagccacggggactgatctat
gttaaactgaacttgatggagcactggcagaactcgttggacggcgggccaaacagagac
cgagagctgcaggtgtttggtgtggaggtgtggcgagtggtggagagggagaataccgga
ctgattgtgccgctgatcatcagcaagtgcatcaatgagatcgagaagagaggctgccag
gtggtcggtctctaccgtctgtgtggctctgctgcggtgaagaaggagctgcgtgaagcg
ttcgagagggacagtcacgctgtggagctgtgtgagagcatgtaccccgacatcaatgtc
atcacaggagttctgaaggactacctgcgtgaactgccctaccctctgatcaacaaaccg
ttgtatgaagccgtgctggacaccatggctgtgagacctctaaaaatgggcgcagcgggg
tgcgagaacgatcaggcggactctgagtacaccgtcaggctgctggaaaacctgccagag
gtggagaggatgactttgcggaagctgcttgaccacttgaagcttgtggcgtcctaccat
gaagtgaacaagatgacatgtcagaacctggccgtgtgtttcggccccgtgctgctcagc
cagcgtcaggaggcgtcctgccacaccaaccgcgtcttcatcgactctgaggagctggcg
agcgctttgcacttcaaaaagcacattgaagtcctgcactacctcctgcagctttggcca
gttgtggacccccatgaccagtcgtcctgtcacccccctgcagcctcagtggctccggcc
tcctctgacctcctgtcagctcctcctctgcggcggaggaaagaacgcccccaggtcctg
aacttcagtgaagtagacatggctggcgtcttgaggcccaagccgggacgtctggacagc
cctagcaaccgctacgctggcgactggagcacctgtggtgaaaattacttcccctctgaa
atgccgccgcctgccagcaaagaggaggtggactacgacgacgtgccctccgaggacacg
gaggcaacggaagacgtccgggacaagcaggaagacacagcagaggaagacaaacaggag
acggtcccaagctctgcgtctgatcccgctgtgcaggagaaccctcaaaaagaggaggtg
gtgagggaggaggaaaatgatgaagagatgaaagatacttcaaacagacactcattagag
gaggaggacgcagaggagaggaggtttaaccacatcctgtcgcctcgactgcctaaagag
cacacctaccaggcctacatgaagatccaggacagggggaacctgagggacctgcaggag
agcatcgacaccctgataggaaacctggagagggagctcaacaaaaacaagctcaacgtt
ggatactga
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