KEGG   Nematolebias whitei (Rio pearlfish): 119430591
Entry
119430591         CDS       T08042                                 
Symbol
kdm4b
Name
(RefSeq) lysine-specific demethylase 4B
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
nwh  Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:nwh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:nwh03036]
    119430591 (kdm4b)
Enzymes [BR:nwh01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     119430591 (kdm4b)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     119430591 (kdm4b)
Chromosome and associated proteins [BR:nwh03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    119430591 (kdm4b)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H JmjN PHD_2 DUF4537 Tudor_3 PHD Raftlin 53-BP1_Tudor
Other DBs
NCBI-GeneID: 119430591
NCBI-ProteinID: XP_037553949
LinkDB
Position
3:14710225..14773113
AA seq 1222 aa
MATDLPMDTLLAPNPVLSSPPDLTPASFPVLDIDAAQDQIPTQEPALAETPDNLITSEQN
AAPDLTPVQPSDPGITSVPAVGSELPPIPLPAPLPPVAAKNPSCKIMTFRPTMEEFKDFA
KYIVYMESQGAHRAGLAKVIPPEGWKPRSSYDAIEDMVIPAPIMQVVTGQSGLFTQYNIQ
KKSMTVGEYRKLANSKKYCTPRHKDFDDLERKYWKNLTFVSPIYGADVGGSIYDDDIQEW
NIGHLNTLLDMVEQECGIVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGQSKSW
YTIPPEHGKRLERLAKGFFPGSCQGCDAFLRHKMTLISPSILKKFGIPFDRITQNEGEFM
ITFPYGYHAGFNHGFNCAESTNFATLRWVDYGKNATLCSCRKDMVKISMDVFVRRLQPDR
YELWKQGKDITVLDHLKPTELTSPELECWRQHRVTYRQKLLHRALQKMKQVRRLKLEEVK
VLAEEGIELNAADYQRQVEEREAQRRQERDERLAREAMMTLEAMEFEENAAAAKAAETLE
TPEAQEGEEPEVNPQNLTEDIEEKKSLSSFKTEEMLTVSGFEEVFKKFATAGIQNSQPDK
VVPSDTTSSTCKTIPADKKMDVSATQPSYSKMKMPTEVKKSRRHPLSKPPMRTPLSIVKQ
ERSAEKGLSSPMSLESSMKKQQHLWQNRSPNFLAEKTFNSAVAGLEPYCAVCSLFCSYKK
KDPSNASNPAHTFMAPRPGSFTRPLVPEICFSGAGNEEPPPTNCYIGEDGTSLLICCEFC
GMQVHASCYGVKPNSVSSSWTCCRCAAGAWTEECCLCNLRGGALKSTTDNKWVHIICAIG
VAEARFINAMEREPVDVSAIPETRKNLKCVFCHSTSPTRTQGACIQCTYENCATSFHVTC
AQVAGVVMKPADWPYLLSVTCHKHKKSPQKTRTVYPRVASPVLDVGRRVIGRNADSWFYP
CTIIGIATQTFYEVNFEDGSYCDNLQPENVISHDCLHHGPPVAGNSIVVVTPDDKILKAT
FVKQHANKVFQVEFQDKSQQMLKQSDIFTLEQELPKRVRTRLAMPTPQLEVSPVHEAQAT
KRPRQPSSSANLKTAAPAPAPAQKRRSISVQPNIKPQTQPIKQEAPTPLSSNKMDAETPM
DTSAPRTNTLTKPPLVSDPTSSPQSTSVQTTLNSDPLQSPPSTAPPAQHMSDSYMPSSGY
VSYMKRLLHSRFPQDDGPSHLY
NT seq 3669 nt   +upstreamnt  +downstreamnt
atggctactgacctgcccatggacacattgttggctcctaaccctgttctgtcctctccc
cctgatcttaccccggcctcttttcctgttcttgatattgatgcagcccaagaccagatt
cccacccaggaaccagcacttgctgaaactcctgataacctaataacttcagagcaaaat
gccgctccagatctcactccagttcaaccttcagacccaggcataacttcagttcctgcc
gtaggttctgagctaccccccatacctctgccagcacccctgccaccagttgctgccaaa
aaccccagctgcaagatcatgactttccgacccaccatggaggagtttaaagacttcgcc
aaatatattgtctatatggagagtcaaggagctcatcgtgccggcctggctaaagtgatt
ccccctgaaggctggaagccacgaagttcttatgacgccattgaagacatggtgattcca
gctcctatcatgcaagtggtgactggtcagtcaggtctatttacccaatacaacattcag
aagaaatctatgactgttggtgaataccgcaaactggctaacagcaagaagtactgcaca
cctcgccataaagactttgatgacctagagaggaaatactggaagaacctgacgtttgtt
tcacccatatatggggctgatgttggtggctctatttatgatgatgacattcaagagtgg
aacattggccatctcaatacgctgttggatatggtggaacaggagtgtggcattgtcatc
gaaggtgtcaatacaccatacctgtattttggaatgtggaaaaccacctttgcttggcac
actgaagacatggatctctacagtatcaactatctacactttggacagtccaagtcctgg
tacaccatcccacctgagcacggcaagaggctggagaggctggcaaaaggcttttttcct
ggtagctgccaaggctgcgatgccttccttcgccacaagatgacactgatatctccatcc
atcctgaagaaattcggcattcccttcgacagaattactcaaaatgagggcgagttcatg
atcacttttccctacgggtaccacgcaggcttcaaccatggcttcaactgtgcagaatcg
acaaactttgccactctgcgttgggtggactacggcaagaatgcgactctgtgttcctgc
cggaaggacatggtgaagatctcaatggatgtgtttgtgcgccgcctgcagcctgatcgg
tatgaactgtggaagcagggcaaagacatcacagtgttggaccacctaaagcccacagag
ctcacaagtcctgaactggagtgctggaggcaacaccgagtcacctaccgacaaaaactt
ctgcatagagcattgcagaagatgaagcaagttcgtcgcctaaagctggaggaggtaaag
gtgctggcagaggaaggaattgaactaaatgctgctgactaccagcgtcaggtggaggag
cgggaggctcagcgcaggcaggagagggacgagcggcttgctagagaggccatgatgacc
ctggaggccatggaatttgaggaaaatgctgctgctgctaaagcagcagagactctcgag
actccagaagctcaggagggagaagaaccagaggtgaacccacagaacctgactgaagat
atagaggaaaagaagagcttgtcctctttcaaaactgaagaaatgctgaccgtgtcaggt
tttgaagaagtattcaagaaatttgctacagctggcattcagaactcacaaccagacaag
gttgttccttcagatacgacatcttcaacatgtaaaacaatcccagcagataaaaaaatg
gatgtgagtgccacccagccgagctactccaagatgaaaatgcctacggaggtaaagaaa
agtcggcgccacccgctcagcaagccgcccatgcgcacccctctgtcgatcgtcaaacaa
gagcggtctgctgagaaagggttgtcctccccaatgtcactagaaagcagcatgaagaaa
cagcagcatttgtggcagaatcgctcacccaacttcttggcagagaagactttcaattct
gcagtggccggactagaaccttactgtgctgtctgctcgctcttctgttcctacaaaaag
aaagatccttccaatgcaagtaaccctgcacacaccttcatggcacccagacctggcagt
ttcactcgcccactggtcccagaaatctgcttcagtggagcaggaaacgaagagccacca
cccactaactgctacatcggagaggatggaaccagtcttctgatctgctgtgaattttgt
ggcatgcaggttcatgccagttgttatggtgtgaagcccaactcggtcagttcttcctgg
acgtgctgcagatgcgcagcaggagcctggacagaagagtgctgtctctgtaatttacgg
ggaggagctttgaagagtaccacagacaacaagtgggtccacatcatctgtgctattggt
gtggctgaagctcgcttcatcaatgccatggagagagaaccagtggatgtcagcgctatc
ccagaaacccgcaagaatctgaaatgtgtgttctgccattcaacaagtcccactcggacc
caaggcgcctgcatccagtgcacctatgagaactgtgctacctccttccacgttacatgt
gctcaggtcgctggagtcgtgatgaaacctgccgactggccctaccttctatcggtcacc
tgccacaagcacaagaagagccctcagaagactcgaacagtgtatcctcgagtagcctcc
ccggttcttgatgtgggtagaagggtgattggacgtaacgctgacagctggttctacccc
tgcaccatcatcggcatcgccacacagacattttatgaggtcaactttgaagatggctct
tactgtgataacttgcagccagaaaatgttataagtcacgactgtctgcatcatggtcct
cctgtcgcgggtaactcgattgtggtcgtcacacctgatgataaaatcctcaaagctact
tttgtcaaacagcatgccaacaaggttttccaggttgagtttcaggataaaagtcagcag
atgcttaaacaatcggatatctttaccctggagcaagagttgcccaaaagggtccgaacc
cgactggccatgcctacaccacagttggaggtttcccctgtgcatgaagcccaagcaact
aaacgcccccgccagccctccagctcagctaacctcaagactgcagcgccagcaccagca
ccagcacagaagcgtcgcagtattagcgtgcaaccaaatataaagcctcagacccagcct
atcaaacaggaagcccccaccccactcagcagcaataagatggatgcagaaaccccaatg
gacacgagtgctccccgcactaacacacttacaaaaccacccttggtctctgaccccaca
tcgtcgccgcagtccacctctgttcaaaccactttaaactctgacccccttcagtccccg
ccttccactgctccgccagcccagcacatgtctgacagctacatgcccagcagcggctat
gtgtcctacatgaagaggctccttcattcacgtttccctcaggacgatggccccagccac
ttgtattaa

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