Nematolebias whitei (Rio pearlfish): 119430611
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Entry
119430611 CDS
T08042
Symbol
rubcn
Name
(RefSeq) run domain Beclin-1-interacting and cysteine-rich domain-containing protein
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119430611 (rubcn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119430611 (rubcn)
Membrane trafficking [BR:
nwh04131
]
Autophagy
Other autophagy associated proteins
Others
119430611 (rubcn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
RUN
Motif
Other DBs
NCBI-GeneID:
119430611
NCBI-ProteinID:
XP_037553974
LinkDB
All DBs
Position
3:complement(17267200..17287458)
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AA seq
964 aa
AA seq
DB search
MDVAAEGEAEELRREHWKLLSSLKTTVEGLLSTNNPNVWSRYGGLQRLHKDMNNILSHGL
KNEQVYFKRRDYWPFVWCVRYISPHLASHVEQFRHLEPVLSSGIQSAGESYKAERWLLHS
LQVHMLSAQLKPLLRHRGNALKFYNDDSFLLSEPHVTAMFQCLEAVEQNNPKLLAQVDTV
GLSPLKGSLCVGLLKSQSLCVLPGSGGTWRNADTTPGGDSLNRRLATSNFSLRDTVARNH
KPTNTNTARSHHTSEESINNKNTTSPASSHEHPWVFVSRSGGIEQGLTPPPCAGSVPSFS
LTESPSPSSLQPEAADSCDGDSDDGPEYLAIGNLGQRNRRGSQGSTHSSEQDGTKQQYLP
RSSTAPTPPRRSSFSEGQRGPGRGARGHTRSFSDTGINQKLRDESANEDGSMTDYSPFSP
QHRDSSTPSSLYMESYGFPNGGAPDGMFRKPSKGQSLISYLSEQDFGSCADLEKENAHFS
ISESLIAAIELMKYNLLCQEVEGEEEGDSDSEIQQLKQKIRLRRQQIRRSRLPPCTSSQH
NFHSTDSGGSRRSSQGSCQGLSDSGSAEEVEECELQDGCEGQSLLAVSQNGLSLSLASLF
SDADIKRSVSSSGKSFLSSESISPSFLQSNSAESVAMGLLRQFEGMQLPAASELDWLVPE
QDAPQKLLPIPDSLPISPDDGEHADIYKLRIRVRGNLEWAPPRPQIIFNIHPAPKRKMIV
TKQNYRCAGCGIRIDPDYIKRLRYCEYLGRYFCQCCHENAQAVVPGRVLRKWDFSKYYVS
NFARDLLSKIAGDPLFNPSDINNCLYKKIKALESVRVLREQLFHMKNLFKTCRFSKEVLD
QFDSLPGHLTEDLHLFSLNDLTAVRNGELASRMKELLKLGTVHVAKCVLCQAKGFVCEFC
GNDKDIIFPFQLSKCQRCEECHACYHRSCFRPGKDCPRCRRLAERRERMARKNMEEQEDE
GGGD
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atggacgttgcggcggagggagaggctgaggagctcaggagggaacactggaagctgctg
tccagcttaaagaccacggtggagggtcttttgtccaccaacaaccccaatgtatggtca
cgttatggtggcttgcagcgcctgcacaaggacatgaacaacatcctcagccatggactg
aagaacgagcaggtgtacttcaagcgacgtgactactggccctttgtttggtgtgttcga
tacatcagcccccaccttgcgtcacatgttgaacagttcagacacctggagccggtgctg
agcagtgggatacagagcgctggggaaagctacaaggccgagcgctggctgcttcatagc
ttacaagttcacatgctctcagctcagctcaaaccgctgctcagacatcgaggaaatgca
cttaaattttataatgatgattccttcctcctgagtgagcctcatgtgacggccatgttt
cagtgtttagaagcggtggagcagaataaccccaaactgctggcccaagtagacacagtt
gggctgtcccctctgaagggttcactatgtgtgggtctgttgaagagccagagcctgtgt
gttctgccgggatccggtgggacctggaggaacgctgacacgactcccggaggagactct
ctgaaccgcagactcgccacgtctaacttctctctgcgagatactgtcgcccgaaaccac
aaacctaccaacaccaacacagctagatcccatcacacaagcgaggaaagcatcaataac
aagaacactacctctccagccagcagccatgaacacccctgggtgtttgtgtccagatca
ggggggattgaacaaggtctgacaccccctccttgcgcggggtccgtcccttctttttcc
ctaacggagtctccctcaccctcttcgcttcagcccgaggctgcggactcgtgcgatggc
gactctgacgatggtccagagtatctggctatcggtaacctggggcaacgcaatcgccgt
ggctcccaaggttccacccacagcagcgagcaggacgggaccaagcagcagtacctgcct
cgcagttccacggctccgaccccaccgaggcgctcatctttttcagagggtcaacggggg
ccagggaggggggctcgggggcacacccgctcgttttcagacacggggatcaatcaaaaa
ctcagggatgaatcggcaaatgaggacggcagtatgacggactacagtcctttctcacct
cagcaccgtgattccagcactcccagttctctttacatggagtcctacgggtttccaaac
ggcggcgctcctgatgggatgttcaggaagccttcaaaggggcagagcctcatcagctac
ctgtcagagcaggactttggcagctgtgctgaccttgaaaaggagaacgctcatttcagc
atctcggagtctctgatcgctgccatcgagctgatgaagtacaacttgctgtgtcaggaa
gtggagggcgaggaggagggggacagcgactctgagattcagcagctcaagcagaagatc
cgcctgcgcaggcaacagatccgccgcagccgtctgccgccctgcacctcctcccaacac
aatttccactccaccgacagcggcgggtccaggaggagctctcagggctcgtgccagggc
ctgtcagactctggctcagccgaggaggtggaggagtgcgaactacaagatggctgcgag
ggtcagtccctgctggcggtgtctcagaacggcctctcgttgtcacttgcctccctcttc
tcagatgcagatataaagcgcagtgtgagctccagtggcaaatcttttctcagctctgag
tccatctctccttccttcctgcagtcgaactcagccgagtcagtagccatgggtttactc
aggcagtttgagggcatgcagcttcctgcagcttcagagctcgactggctggtcccagaa
caagacgctccgcagaagctgcttcccattcccgattctctgccaatctcccccgatgac
ggggaacacgcggacatctacaagttgaggattcgagtccgaggcaacctcgagtgggcg
ccgcctcgcccacagatcatcttcaacattcatcctgccccaaagaggaagatgattgtc
actaagcagaactaccgctgtgctggttgtggcattcgcattgacccagactacatcaag
cggctgcgttactgcgagtacctcggccggtacttctgccagtgttgccatgaaaacgcc
caggcggttgttcccggccgagtgctcagaaagtgggacttcagcaagtactatgtcagc
aactttgcccgggacctgctgagcaagatcgctggagatccgcttttcaaccccagcgac
atcaacaactgcttgtacaagaagatcaaggccctggagtccgtcagggttttgagggag
cagctgttccacatgaaaaatctcttcaagacctgtcgcttctccaaagaggtgctcgac
cagttcgacagcctgccaggccacttgaccgaggacctccacctcttctctctcaacgac
ctcactgccgtgcgcaacggagaactggcgtcccgaatgaaagagctgctcaagctgggc
accgtacacgtggctaaatgtgtgctgtgccaagcgaagggctttgtgtgcgagttctgc
ggcaacgacaaagacatcatcttccccttccagctgagcaagtgccagcgctgcgaagag
tgtcacgcgtgctaccatcgcagctgcttccggccgggtaaagactgccctcgatgtcgg
cggctggcggaacgcagagagaggatggcacggaaaaacatggaggaacaggaggacgag
gggggtggggactaa
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