Nematolebias whitei (Rio pearlfish): 119430685
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Entry
119430685 CDS
T08042
Name
(RefSeq) desmoglein-2
KO
K07597
desmoglein 2
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119430685
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nwh04515
]
119430685
Cell adhesion molecules [BR:
nwh04515
]
Cadherins
Major cadherins
119430685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
RET_CLD1
TTL
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
119430685
NCBI-ProteinID:
XP_037554074
LinkDB
All DBs
Position
3:24812729..24846243
Genome browser
AA seq
1402 aa
AA seq
DB search
MAWTLFLKKNLLLLIVLLSVAKAETENKEMTLKRTKREWILPPSKLEENTNYTHLEFIAK
IRSDRDQNHKVEYFLKGNGADKPPYNLFVVDANTGFIRVTDILDREKYPFYNLTGVAKYK
DGSDAEDNIPLTVTVIDQNDNAPYFELHTGNVSESSKKGTFVMQIEGKDDDQAGTINAQI
SYSIISQEPKGKGPMFTIDSKTGKLYVNDPTLDRETHDFYKLVIRGTDMGGAPGGKTGTG
TVEVKILDINDNIPTLEKSEYAGSVDENVADVVVMRIKALDNDLPNTDNWLAVFKIAKGN
EDNLFSIETDPKTNEGILKLIKAVDFEEVQNLELGLLIENVAPFVVGSAIEMDVDVQVGE
GLPVAAGAGAGAGAGAGAGAGAGVGVGVGVDAGVDLDLGVDLGLDLGLDLGLDADLDAGL
DAGLKPDLGLGPGIGVKPGVGPGVGPGVGPGVGVGLKPGIKPGPGIKGKPNAPAKSYPIK
IAVNNVPEGPRFSPDTKKVPVSEDPNDAPLDGVLTVFAALNPDTGKPAENVNYAKAYDPD
NWFTIDEETAEIKLNKVPDRESPFLVNGTYVAKILAITKDMPAKTATGTIAIQVADSNDH
CPSLVTAHSSLCSDKKTVLVTAFDEDVYPNSSPFTFRIVPEGTKGNWAVEVINETTAALH
SSDSLWPGTYELKLEVMDAQGLSCESDEVFTLDVCTCVAKEDCANSKALRHGSTGSNFST
HAIGPLIAAMFLLMVIPFFLVFCQCKAKDGIFPDLFKDIPFDTKEHLIHYQTEGLGEDKE
FPLCSVPIMGTKLNTETSPMSNIGNVFSETTETHHTSFYNESGRVFRENTLSPMETDNNH
KFSGDLYTHDNDMTTFNTHMSFIEEAGAYYEDIALPDAFLEDYYSQKALCDVPVTETLLR
YDYEGQFSSAGSVSSCSLVEFDNDLDFLTDLGPKFKTLAEICCPPTAKPKPLLTHKASGA
VKTTTMTEPVFKPKVEKDVETKHVDMKTEKVTSSTNVVKRSVSSVGTTSQSTTLPSSPRS
KVTNVSRSASFNHSAGFNRSATLPYPTQTVVLQQQPVYYAPNPVMQPMHYFIQQNPPNTI
LVDDRSLMLMNDPQGLSRLVMNGTQSSYSGLVLQGIDGSMSPKSPVSPTSPFRTTVLMPS
PTASQGLVSMEGCKIVGPNSAGAYVLVNDKSRPGEVEVRDRGSSEGILPSDVVLVKKAAP
PQGVLGSAAQTTETDYSHLLDRVAKKGNNVSQNWYIGQIGFWQKTQTGYGSLVVFRFFSS
QLQIWMIRVATVRIHLHKYHLPKRLSIYILLQLEFKSLTNGDNRKVHFSKYSIQNISSVT
KCNFKHNKYCKKTCKSLNTLSIIYNNERNTSAVKVWSHVLDIFLKIINACILYVLTLFRY
VCANDFYRIQFSLVRTKKSFST
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggcttggactttattcctaaaaaagaatctcttgcttttgatagtgctgttgtcggtg
gccaaagctgaaacagagaataaggaaatgacgttgaaaaggacgaaaagagagtggatc
cttcctccttccaagttggaagagaacacaaactacacccatttggagttcatcgctaag
attcgctctgaccgagatcaaaatcataaggtggagtatttcctcaagggaaatggagct
gacaaaccaccctacaacctctttgttgttgacgccaacaccggcttcatacgagttact
gacattctggaccgggaaaagtatcctttctacaatctaacgggcgtagcgaaatacaaa
gatgggtccgatgccgaggacaatatcccactgactgtcacagtcatcgaccaaaatgac
aacgctccttactttgagctgcacacagggaacgtttcagagtccagcaaaaaaggaacc
tttgttatgcagattgaaggtaaagatgacgaccaggccggaactattaatgcacaaatc
tcgtatagcatcatcagtcaggagccaaagggcaaaggtcccatgttcactatcgattca
aagactggtaaactttacgtcaatgaccccacactggacagagagacccatgatttctac
aaactggtcatcagaggaactgatatgggaggtgcaccaggggggaaaacagggacagga
actgtggaggtcaaaatcctggacatcaatgacaacatccctactctggaaaaatctgag
tatgcaggctcagtggatgaaaacgttgctgatgtggttgtgatgagaatcaaagctctg
gacaacgaccttccgaatacggacaactggctagctgtcttcaagatcgccaaaggaaat
gaggataatctcttttctattgagacagatccaaaaaccaatgaaggcattctgaagctg
atcaaggccgtagattttgaagaagtacagaatcttgagcttggcctcctcattgagaat
gtggctccttttgtagtaggcagtgcgatagagatggatgtggatgtccaggttggagaa
ggtcttcctgtggctgccggagctggagctggagccggagctggagcaggagctggagca
ggagctggagtcggtgttggagttggtgtggatgcaggagtagacctggacctgggagtg
gatctgggtttggatctgggccttgatttaggactagatgctgatctagacgctgggttg
gatgcaggacttaaacccgacttaggacttggacctggaattggagttaagcccggtgtt
gggcctggtgtcgggccgggtgtcgggcctggtgtcggtgttggacttaagccaggcatc
aaaccgggaccaggaatcaaggggaagcccaatgctccagcaaaaagctatcctattaaa
atagcagtaaacaatgttccagagggtccaagattttcacctgacaccaagaaagtgcct
gtgtccgaggaccccaacgatgcaccgttagatggagtacttactgtgtttgctgctctc
aatccagatacaggaaaaccagctgaaaacgtcaactatgctaaagcctatgatccagat
aactggtttactatagatgaagagacggctgagatcaaactcaacaaggtaccagacagg
gagtcacccttcttggtcaacgggacctatgtggccaaaattctggctataactaaagac
atgccagcaaagacagccacagggacaatagccatccaggtcgctgactccaacgaccac
tgtccttctctggtcactgcacacagcagtctgtgctcggataaaaaaacagtgttggtc
actgcttttgatgaggacgtctatcccaattcatctccattcactttccgaatcgtacct
gaaggtacaaaaggaaactgggctgtagaagtcatcaatgagactacagcagcacttcat
tctagtgatagcttgtggccgggaacatatgagctgaagctagaagtgatggatgctcag
ggtctttcctgtgaaagcgacgaggtgtttactctggacgtttgtacttgcgttgcaaag
gaggactgcgccaactcaaaggcattaagacatggaagcaccggatcaaacttttcaaca
catgccattggcccactcatagcggctatgttcttactgatggtgattccctttttcttg
gtgttctgccaatgcaaagcaaaggatggcattttccctgatctgtttaaagacatacca
tttgacacaaaagaacatctgatacactaccaaactgaaggtttgggtgaggataaggag
tttccactctgctctgttcctattatgggaactaagctaaatactgagacatcaccaatg
tcaaatatcggcaacgtattctccgaaaccacagaaacccatcacacatcattctacaat
gaatctggtcgggtgtttcgggaaaatactctaagtccaatggaaactgacaacaaccac
aagttttcaggagatttatacactcatgacaatgacatgacaacattcaacacacatatg
tcatttattgaagaagcaggagcttattatgaggacatcgcccttcctgatgctttcctt
gaggactactactcacagaaagcactctgtgatgtgccggtgaccgaaacattgctccgg
tatgactatgaaggccagttctcctctgctggctcagtgagctcctgtagcttagtggaa
tttgacaatgacctggacttcctcactgaccttggaccaaagtttaagactctggctgag
atctgctgccctcctacagcaaagcctaaacctcttctgacccacaaggcttcaggtgct
gtcaaaacaacaactatgactgaaccagtcttcaagcctaaggttgagaaagatgttgag
actaagcatgttgacatgaagacagagaaggtgacatcatctactaacgtggttaaaaga
tccgtcagttcagtaggcaccacctcgcaatccacaactctccctagctcccctcgctcc
aaggttaccaacgtcagtcgttctgctagctttaatcattccgcaggcttcaatcgttct
gccacactgccatacccaactcagaccgtggtactacagcagcagccagtttactatgcc
cctaatccagtaatgcaacccatgcactactttatccaacaaaatccaccaaacacgatt
ctggttgacgataggtccctgatgttaatgaacgatccgcagggtctgtctagactcgtg
atgaatggaacccagagctcctattcggggctagttctccagggcattgatggctctatg
agtcccaaaagtcctgtcagccctacgagtccattcagaaccactgtgttgatgcctagt
ccaactgcctcccaggggttagtctccatggaaggctgtaagatagtagggccaaactct
gctggtgcttatgtgttagttaatgataagagcaggccaggtgaagtagaagtgagggac
cggggctcatctgaaggcattttgcctagtgatgttgtcctggtgaaaaaggctgctccc
cctcagggggttttaggatcagcagcccagactacagagaccgactacagtcacctctta
gatcgtgttgctaaaaaaggtaacaatgtatcacaaaattggtatataggacaaatagga
ttttggcagaagacgcaaacaggttatgggtcattggttgtgtttagattttttagtagt
cagctacaaatatggatgatacgtgtggcgacagtgcgtatacacctgcacaaataccac
ctgccaaaaagattgtcaatatacattttattacaactggagtttaaaagtttgactaat
ggtgataaccgtaaagtgcatttttctaaatatagcattcaaaatatatcatcagttaca
aaatgcaattttaaacacaataaatattgtaaaaagacttgcaaaagtttgaatacactg
tctattatttataataatgagagaaatacttcagcagtgaaagtctggtctcatgttctt
gacattttcttgaaaattataaatgcttgcatattatatgtattaacactgtttaggtat
gtctgtgctaatgatttttatagaatacaattttctctagtgcggacaaagaaatctttt
agcacatga
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