Nematolebias whitei (Rio pearlfish): 119430704
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Entry
119430704 CDS
T08042
Symbol
colgalt2b
Name
(RefSeq) procollagen galactosyltransferase 2
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh00310
Lysine degradation
nwh00514
Other types of O-glycan biosynthesis
nwh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
119430704 (colgalt2b)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
119430704 (colgalt2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
nwh01003
]
119430704 (colgalt2b)
Enzymes [BR:
nwh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
119430704 (colgalt2b)
Glycosyltransferases [BR:
nwh01003
]
O-Glycan biosynthesis
O-linked Gal type
119430704 (colgalt2b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Aminotran_4
Motif
Other DBs
NCBI-GeneID:
119430704
NCBI-ProteinID:
XP_037554097
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All DBs
Position
3:complement(28069238..28113380)
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AA seq
615 aa
AA seq
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MRAVGAAGVGVLWAVLVALVPGGVSELVTLVQERVQPESSLLPPKVLIAILARNAAHSLP
HHLGCLERLEYPKERVAIWAATDHNVDNTTAMMREWLKKAQRVYHYVEWRPMEEPRSYTD
EWGPKHWPPSRFNHVMKLRQAALKAARERWADYVLFVDSDNLLTNPRVLNLLMAENLTLV
APMLESRSLYSNFWCGITPQGYYLRTPEYQPIREWKRLGCFPVPMIHSTFLLDLRRESSR
DLTFYPPHPDYSWAFDDIMVFAFSARQAGVQMYVCNKEHYGFLPVPLKPQQSVEDERENF
IHTITEALIDHDIDPSEFIYPPPAPMSKIGFDEVFLINLKRRLDRRTRMLKTMASLGLHA
TLIDAVDGKALNVSQLQALGIEMMPDYKDPYSGRILTRGEIGCFLSHHSIWTQVVERSLQ
KVLVLEDDVRFEPRFKRRLQAIMDDIDRTQLDWDLIYVGRKRMQVQQPEQSVEGVNNLVE
ADYSYWTLAYALSQQGARKLLAAQPLAKMLPVDEFLPVMFNKHPNAQYMSHFERRDLRAF
SLEPLLIYPTHYTGEPGYISDTETSTIWDDDAVATDWDRQHARKTAQQGRIRPMAQNSVT
GDSPPPAARASRDEL
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgcgggctgtcggggccgcgggagtcggtgtgctgtgggcggtgctggtggctctggtg
ccgggcggcgtgtcggaactggtcacgctggtgcaggagcgggtccagcccgagtcctcg
ctgctgccgccgaaggtcctgatcgcgatcctcgcgcgcaacgcggcgcacagcctgccg
caccacctgggctgcctggagcggctggagtacccgaaggagcgcgtcgccatctgggcc
gcaaccgaccataatgtggacaacaccactgccatgatgagagaatggctgaagaaagcc
cagcgtgtctatcactacgtggagtggaggccgatggaggagcccaggtcttacacggat
gagtggggcccgaaacactggcctccttccagatttaaccacgttatgaagctgagacaa
gcggctctgaaggcggcgcgggaacgatgggctgactatgtcctgtttgtcgacagtgac
aacctgctgaccaaccctcgagtgctgaacttgctgatggcggagaacttgaccctggtg
gctcccatgttggagtctcgctctctgtactccaacttctggtgtggcatcaccccacag
ggttactacctgcgaaccccagaataccagcccatccgggagtggaagaggctcggctgt
tttcctgttcccatgatccacagcaccttcctgttggacctgcgccgtgaatccagccgg
gacctaaccttctaccctcctcacccggactacagctgggcgttcgatgacatcatggtg
ttcgccttctccgcacgtcaagcaggtgtgcagatgtatgtgtgtaacaaagaacactac
ggtttccttcctgttcctctcaagcctcaacaaagtgtggaagatgaaagagagaatttt
atacacaccattacagaagcgctgattgaccatgacatcgacccctcagagttcatctac
ccacctcctgcgcccatgtccaagataggatttgacgaagtttttctgattaatctgaaa
cgcaggcttgacagaagaaccaggatgttgaaaacaatggcctctctgggccttcacgcc
acactgatcgatgcggtggacggcaaggctctgaatgtgtctcagctccaggcgctgggt
attgaaatgatgccggactacaaggatccatactctggccgtatcctaaccaggggggag
atcggctgcttcctgagccatcactctatatggacacaggtggtggaacgcagcctccag
aaggttctagttttagaggatgatgtgaggtttgagcccaggtttaaacggaggcttcag
gccatcatggatgacatagacagaacccagctggactgggacctcatctacgtggggcgt
aaacggatgcaggtgcagcagccagagcagtcagtggagggtgtaaacaacttggttgag
gccgactattcctactggaccctcgcctacgcgctgtcacagcaaggagccagaaagtta
ctggctgctcagcctttggccaagatgctccccgtcgacgaatttcttcccgtcatgttc
aacaaacaccccaacgctcagtacatgtctcactttgagcgccgggacctgagggccttc
tccttggagccactactcatctaccccacccactacaccggagagccgggctacatcagt
gacacggagacctccaccatctgggacgatgacgccgtggccacagactgggaccggcag
cacgcccgcaagacggcccagcaaggccgcatccggcccatggcacagaacagcgtcacc
ggagactcgccacctcctgcagctcgagcatcacgagacgaactctga
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