Nematolebias whitei (Rio pearlfish): 119430722
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Entry
119430722 CDS
T08042
Symbol
si:ch73-63e15.2
Name
(RefSeq) protein strawberry notch homolog 2 isoform X1
KO
K26273
protein strawberry notch
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nwh03036
]
119430722 (si:ch73-63e15.2)
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
119430722 (si:ch73-63e15.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
DEAD
TPR_23
Motif
Other DBs
NCBI-GeneID:
119430722
NCBI-ProteinID:
XP_037554119
LinkDB
All DBs
Position
3:31132206..31203360
Genome browser
AA seq
1578 aa
AA seq
DB search
MPTLTSALAMDGENYLHPEGPQLDRSLFSVAPSTMESSIYSSPGLWGSYSQQPGYSTRCP
MQPGNQQYPLSSNNTTTVPDMHMDLYQGIPDMDFASLSLPRNGDFSQDLSCIDDLSNSLF
SSPADSLSEYADSQTFVSGDTLDSVPTLWDVNTSSTATPAQSHLEQNGTGRFQNLASLDD
ITAIISTPPLGGFQAQGTQPPPVEEEDADEEEAEELGHVDTYAEYKPSKSTIGISHPDIV
VETNTLSSVPPPDVTYTLAIPKPTVDSGLLSALQLEAVIYACQQHEVILQNNQRAGFLIG
DGAGVGKGRTVAGIILENFIKGRKKALWFSISNDLKYDAERDLKDINAQNIPVLALNKIK
YGDTATSEGVLFATYSALIGESQAGGQHRTRIKQILDWCKPDFDGVIIFDECHKAKNATS
TKMGKAVLDLQNKLPQARVVYASATGASEPKNMIYMSRLGIWGEGTPFRTFEDFLHAIEK
RGVGAMEIVAMDMKVSGMYIARQLSFSGVSFRIEEIGLDSDIREVYNKAAKLWAEALQVF
MLAADELGLVSRKSLWGQFWSSHQRFFKYLCIAAKVRSLVELAQKELEAGKCIVIGLQST
GESRTREVLDENDGHLDRFVSAAEGVFQSLVSKHFPSEKQRREKAPGNKRKRKPRGRQSK
VPKHTVDSGGVINISDDSSSDSDGMDTDSNSSPDSLQDNDDVIFVHHTSCQSARIEDMKQ
GLLNKISELGKELPLNTLDVLIDKFGGPDKVAEMTGRKGRVVRRPDGIVRYESRAEQGST
IDQINIKEKDRFMNGEKLVAIISEAASSGISLQADKRVNNQKRRVHMTLELPWSADRAIQ
QFGRTHRSNQVTAPEYIFLISELAGERRFASIVAKRLESLGALTHGDRRATESRDLSKYN
FENKYGTKALDKVTKAILGHIENKVPPPKGYPGGDARFFQEIKIGMIHVGIICKEPRFGI
STEKDCSITKFLNRILGLEVHKQNYLFQYFTDNFDYLIEKDKKEGKYDMGILDLAPGNDE
IYEERQETFLTAGNPQDGQVVLYKITVDRGMPWEEAYSKSLKLSASDEGFYLSYKLRGNS
PCVLLAEQGRGKNFNIYKPNIGKQTQPESLNNLLQRYRKVTSEEAKDSWENQFTFSLKKC
SHANWNGKCKKIEEGQECLQGMRLRQYHMLCGALLRVWKRVSDVVSDITNSSILQIVRLK
TKQRNKQVGIKIPEACVTRVREELLLMDEEVKKRRKEKQQQERMRQIEQENKRLPENQNP
VLNHFLVQNPSHVFKQNPNQNALQRTQNGSMSQLEAQIQSALQQPPYSLSLFPLQRNQTR
THNGWPSSSTSSSTNNQVALPKTVSHRFSQFYNQPFLPSYHLSKSTPLQLHQTAPSPDLS
SSNPLNEILDLTMSSPSPSTDSTEAGPSLDTLPDFNLALFPVTVPDPQHPAQTQQPLMLQ
QHHHPAPQQQNHNLLPTNHDQDLLEILGLALSPHMPTQKANPSSSTSSCSSSTSTTSSLP
NNPVSLFSIPSSSPSSSSSSSSLFSSSFPAPYLLPQSDSVSLTNGHCSSGALDVREALNS
MLQAGQDRKSVIQYPQQD
NT seq
4737 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccctcacctcagcgctggccatggacggggagaactacctgcatccagagggc
cctcagctggaccgcagcttgttctcagtggccccctcaacgatggagagttcaatatat
tcctcccctggtttgtggggatcctactctcagcagcctggatacagcacacgctgtcct
atgcaacctggaaaccagcagtaccctttgagcagcaacaataccaccactgttccagat
atgcacatggacttgtaccagggaatccctgacatggactttgcaagcctcagtctccca
aggaatggagatttctcccaggacctgtcctgcatcgatgacctctcgaactctctgttc
tcctctccggctgactctctgtcagagtatgctgactctcaaaccttcgtcagcggcgac
accctggacagcgttcccacgctgtgggacgtcaacactagcagcaccgccacaccagca
cagagccacttagagcagaatggcaccggcaggtttcaaaacttggccagtttggatgat
ataacagctattatcagcactccacctttaggaggattccaggctcagggaacacagcca
ccaccagtggaggaagaggatgccgatgaggaagaggcagaagaacttgggcatgttgac
acatacgctgagtacaaaccttctaaatccactataggaatttctcatcctgacatagtg
gtggaaaccaacacgctgtccagtgtccctcctcctgacgtcacatacactttggctatc
cccaagccgactgttgacagtgggcttctgtctgctctgcagctagaagctgtcatctat
gcctgccagcaacatgaggtgatccttcagaacaaccagagggcgggcttcctcattgga
gatggtgccggtgttggaaaggggcgcaccgtggcaggaatcatcctggagaacttcatt
aagggaagaaagaaagcactgtggtttagcatatccaatgacctgaaatatgacgcagag
cgagatctcaaagacataaacgcacagaatattcctgtgctcgccttaaacaagattaag
tatggagacacagctacctcagaaggagtcctgtttgcaacttactcagcgctgattggt
gagagtcaggctggagggcagcaccggacaagaatcaagcagatcctggattggtgcaag
ccggactttgatggagttattattttcgacgaatgccacaaagccaagaacgccacctcc
actaagatgggcaaagcagtgcttgacctgcagaacaagctgccacaggccagagtggtg
tacgccagtgccacaggtgcctctgagccaaagaacatgatttatatgagccgcctggga
atatggggtgagggcacaccgttcagaacatttgaagacttcctgcatgccattgagaag
agaggggttggagccatggagattgtagccatggacatgaaagtaagtgggatgtatatt
gccaggcagctgagcttctctggagtgtccttccgcatcgaggagattggactggacagc
gatatcagagaggtctacaacaaagctgccaaactgtgggcagaggcgctgcaggtgttc
atgctggcggctgacgagctgggcctggtcagcaggaagtctctgtggggacagttctgg
tcgtctcaccagcgcttctttaaatatctctgtatcgctgccaaagtgcgctccctagtg
gaactggcccagaaagagctggaggctggaaagtgcatcgtcatcgggctgcagtcaact
ggagaatcacgcaccagagaagtcttggatgagaatgacggacatcttgacagatttgtt
tctgcagcagagggagttttccagtcccttgtatcaaagcattttccttcagagaagcag
aggagggagaaggcaccgggaaataagagaaaacgaaagcccagaggtcgtcaatccaag
gtgcccaagcacacagtggacagcggcggcgttatcaacatctccgacgacagcagcagc
gattccgacggcatggacacagactcaaactcctcaccagactccctgcaagacaacgac
gacgtcatctttgttcaccacaccagctgccagtcagccaggatagaggacatgaagcag
ggcctcctgaataaaatatcagaactaggaaaagaactacctctcaacacgttggatgtg
ctcattgataagtttggagggccagataaagtcgctgagatgacaggacgtaaaggccgc
gtggtgcgacgtcctgatggcatcgtgcgttacgagtcgcgggctgagcagggctccacg
atcgaccagatcaacatcaaagagaaggaccgctttatgaacggagagaagttggtggcc
atcatctcagaggcagccagctctgggatttccctgcaggcagacaaacgagtgaacaat
cagaagcgccgggtccacatgaccctggagctgccgtggagcgcagacagggccattcag
cagttcggtcgaactcatcggtccaatcaggtgacggctccagagtacatcttcctcatc
tcagagttggctggagagagacgtttcgcttctatcgtggctaaaagattagagagtctg
ggtgcgctgactcatggagacagacgagccactgaatcaagagatctgagcaagtacaat
tttgagaacaagtatggaaccaaggctctagataaagttactaaagcaattcttggccac
atagagaacaaggtgccccctcccaaaggataccctggtggggatgcccgattctttcaa
gagataaaaattggaatgatccatgtgggcattatttgtaaagagcctcgctttgggatc
agcactgaaaaagactgcagtatcactaagttcctaaatcgcatcctgggcctggaggtc
cacaagcagaactatctcttccagtactttacagataactttgactacctgatcgagaag
gacaagaaggagggcaaatatgacatgggaatcctggatcttgctcctggtaatgatgag
atttatgaggagaggcaggaaacgttcttgacggctggaaaccctcaagacgggcaggtt
gttctttataagatcacggtagacagaggtatgccctgggaagaggcctacagcaagtcc
ctgaagcttagcgcttctgatgaggggttctacctgtcctataagctgcgagggaacagt
ccctgtgtgctacttgctgagcagggacgaggtaagaacttcaacatctacaagcccaac
attggcaagcagacgcagcctgagagcctcaacaacctgctgcagagatacagaaaggtt
acttcagaggaagctaaagacagctgggagaaccagttcaccttctctttaaagaagtgt
agtcacgccaactggaatgggaagtgtaagaaaatcgaagagggccaggagtgtctgcag
ggcatgcgtctccgtcagtatcacatgctgtgtggggcgttgttacgggtgtggaagcga
gtgtccgacgtggtgtctgacatcaccaactccagcatcctgcagattgtccgcctcaaa
acgaagcagcgcaacaagcaagtcggtatcaagatcccagaggcctgcgtgacccgtgtg
cgtgaggagctgctgctaatggacgaggaggtgaagaagaggcgtaaggagaagcagcag
caggagcgcatgcgtcagatagagcaggagaacaagcgccttccggaaaaccagaacccc
gtcctcaaccacttcctcgtccagaatccgagccacgttttcaaacagaacccgaaccag
aatgctttgcagaggactcagaacgggagcatgtcccagctagaggcccaaatccagtct
gctctgcagcagcccccctacagtttgtctctgtttcccctacagaggaaccaaaccagg
acccacaatggctggcccagcagctccacctcctctagcaccaacaaccaggtggctctg
cccaaaaccgtgagccacaggttctctcagttctacaaccagcccttcttaccgtcgtat
catttatccaagagcacgcctctccagctccaccagacggcgccgtctcccgacttgtct
tccagtaatcccctgaatgagattttggacctgaccatgagctcgccgtctccctccaca
gacagcacagaggctgggccgagcctggacaccctgccggactttaacttggctctgttc
cccgtgaccgtccccgacccccagcaccctgcacagacacagcagcctttgatgctccag
cagcaccatcatccggctccccagcagcagaaccacaaccttctacccaccaaccacgat
caagacttactagagatactcggcttggcgctgtctccccacatgcccacacagaaagcc
aacccttcatcctcaacctcctcctgctcttcctccacaagcaccacctcgtccctgcca
aacaacccggtttcgctcttctccatcccttcctcatccccttcctcctcttcctcctcc
tcctcgctcttttccagttcgttccctgcgccctacctcctgccacagtccgactccgtt
tctctaaccaacggccactgcagctctggcgctctggacgtccgcgaggccttgaacagc
atgctgcaggccgggcaagaccgcaagtctgtcatccagtaccctcagcaggactaa
DBGET
integrated database retrieval system
