Nematolebias whitei (Rio pearlfish): 119430830
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Entry
119430830 CDS
T08042
Symbol
arhgef18b
Name
(RefSeq) rho guanine nucleotide exchange factor 18
KO
K21066
A-kinase anchor protein 18
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
119430830 (arhgef18b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119430830 (arhgef18b)
Membrane trafficking [BR:
nwh04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
119430830 (arhgef18b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
C1_1
PH
SOS1_NGEF_PH
PH_13
C1_2
PHDvar_NSD
Motif
Other DBs
NCBI-GeneID:
119430830
NCBI-ProteinID:
XP_037554241
LinkDB
All DBs
Position
3:complement(20272717..20328471)
Genome browser
AA seq
1690 aa
AA seq
DB search
MADSPLNHSWPSFSKLWMKRWSFKRASDSCSHSCGNPNGQLGVRPLAPSGKRSSTSLTPA
SITEDEFFGSNVDDQDTCSVVGDYDCPFVEEGSSVEDLQGLSPSLTDSEYFRDLEGATLT
SQTPASTGTTKRTERNSQQPVDSQLLSNTDSPITDRPTQTALTTHCTHVDATSLPFCTQP
PEELPSDLVTQLSLELLSGCLFDGGDSADPSLHFNLMFTQNGELGSLETVEATTGLEEIK
GQAMMDLDGEPDLDSLPILVRSMSTSRRHSWGVPLSPISSDRRLSLDTIAIDSDDEEQQS
SLFQSTLQQSDSCSASTGEESDGSSMKLPMPQALIFSQTTGVPGRPLYSRSDILATDECS
RAAHISRVVQTSKQAARAAGVAEEFDPEENLHSTEDQSHMLMVQKVLQELKLYHGAKQRS
NSSDTKKSGNVTWYEFLSNENEEEEDRTEKVEKGAKVRRTFSSLRNRVTGSFNKDKGKNR
EKELQRERERAKEKDKEKVCHSSNGHRLVPGSFSSSATCSLCSKSLQKKHGLQCMNCAVN
VHKSCKSLLGECTSSRNKKDCLPKAGTSSPNIALKDRDREKDQAGTATSQVLDGRRPSIP
GMTLSLCGPSTSAAQSTSSTLVPACSAGHGLRHNSSSVPSALDKCMCSSLRVFVCSSLSN
FRHVCHPGPLRSLSGEMDETDAGGFKRCNDDSISLASSIAESIVVEDANYGAVRVDLESD
AQDFKADSWSLEVDPQYLKKHSKEVVKRQDVIYELMQTEMHHVRTLKIMLLVYAQELKEN
LQMDSSRLDCLFPRLETLLELHTQFFSRLKERRRENLVSPSTKNYTINRVADILITQFSG
EIGEKMKESYGDFCSHHAEAVSYYKDQLQNNRRFQNLIKKINNLSIVRRLGITECILLVT
QRITKYPVLVERILHNTEVGTEEHENLTRALSLIKDTIVQVDALVNLYEKNSRLQDIHNK
IEPKASGKFKDGRVFRREDLTQGRRQLLHEGTVSWKAASGRLKDILAVLLSDVLLLIQEK
DQRYAFAAVDNKPPVISLQKLIVREVAHEEKAMFLICASSNEPEMYEIHTTCKEERNTWM
THIRQAVENCPHSEERLFSEEEEARAVRLKEFQERLSQKDAVIVQALTEKLQLFAEMAES
VSGLEEVASRSRLMLRGDTSDLQQGETLLKGAITEVENLQNLLQSGVGEETQPSRMEEGG
GSGVLPRRADTFGGYDSNPTIFIKNGSMKKSFSCKPRNRDRSQRASSDPQLKDLCGSHTL
EQTVDETCCSPPRWNCIWSNSFPEAEFFDRVLMLSQRLYSLQAIISQQDSQIELQRASLT
ERVPLPGRHRGNVLLEQEKQRTLALQREELATLHKLQSQHRQEQQRWEKERERHRQQVEA
TEARLLQREEECRRLEEQLAKEREELDMQRETYQQDLERLRESTKAVEKEKERLENLKKF
KRKTIEVAPLSGSLNGELLSPPGLSSSTSASDLPLAHKPLVRSSLSVTPADYPERPEVTL
RREAGSSTLPLKTEVPLHLFSTTNQQHKLVGVQQQIPTKLAAINSGKGKGGKGKASHRTD
STASMDMKQMLPLKLSSKEDNILKAKRSISPHQQPPSLHHHTDQLSPPDSTGLDTQLTSS
VSSSHPPHAQKPPMPTTHPHPPPSIPPHPQSTDPPQFQPHVQNVHGLSHSKSPPYTIPTE
DLNKEEVIFF
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atggccgactcgcctctcaatcactcctggccgtccttctctaaactctggatgaagaga
tggtccttcaagagagcatctgattcatgtagtcactcctgtgggaatcccaatgggcaa
ctcggcgtccggccccttgctcccagtgggaaaaggtcttcgacctcattaaccccggcc
tccatcacagaggatgagttcttcggcagcaacgttgatgaccaggatacatgttctgta
gtcggcgactacgactgtccctttgtggaggagggcagcagtgtggaagacctgcaaggc
cttagtccctctctcacagactctgagtacttcagagacctggagggagccacgctgacc
tcacagacccctgcatcaacaggaaccactaaaagaacagagcgaaacagccagcagcct
gttgactcacagctgctgtcaaacacagacagtccaatcactgaccggcctacgcagacc
gctctgaccacacactgcacgcatgtcgatgcaacatcacttcccttctgcacacaacct
ccggaggaacttccctctgacctcgtcactcagctcagtcttgagctgctctcaggttgt
ctctttgacggtggtgactccgctgacccttctttacattttaacttgatgtttactcaa
aatggagagctgggatccttagaaactgtcgaagcaacaacaggacttgaagagataaag
ggccaagcaatgatggatttagatggagagccagacctggacagtttacctattctggtc
agatccatgtcgacatctcggcggcatagctggggggtccctctgtcacccatcagctct
gacaggaggttgagtctggacaccatagccatagacagcgatgatgaggagcagcaaagt
agtcttttccagtccaccctgcagcagtctgacagctgctctgcatcaaccggagaggag
tccgatggctccagcatgaagctgcccatgccacaagcgctcatcttctctcagaccacc
ggtgtgcctggcaggccgctgtactctcgctcagacatcctcgccacagatgaatgttcc
cgagcggcgcacatttctcgtgtcgtacagacgtccaaacaggccgcgagggcagcagga
gtggccgaggagttcgaccctgaagaaaacctgcactcgactgaagaccagagccatatg
ctgatggtacagaaagttctgcaggagctaaagctgtaccacggagcaaagcagagaagc
aacagttcagacaccaaaaaatcaggaaatgtcacttggtacgagttcctttcaaatgag
aatgaggaagaggaggatcgtacagagaaggtggagaaaggcgccaaggtgagaaggacc
ttcagctctctgaggaacagggtgaccggctccttcaacaaagacaagggtaagaaccga
gagaaagagctgcagagagagagagagagagcgaaggagaaggacaaggagaaagtgtgc
catagcagcaacgggcatcgcttggtgccaggctccttctccagctccgccacctgctca
ctgtgcagcaaaagcctgcagaaaaagcatggcctgcagtgcatgaattgtgctgtgaat
gttcacaagagctgcaagtctctgctgggtgagtgcaccagcagcaggaacaagaaagat
tgtcttccgaaggccggcacatcatctcctaacattgcgctgaaagaccgggacagagaa
aaggatcaggcaggcacagctacatcccaggtcctggatggccgcagaccaagtatccca
ggcatgacccttagtttgtgtggccctagcacgtctgccgcccagagcaccagctccacg
ttagtccctgcctgcagcgctggtcacggtcttcgtcacaacagcagctcagttccttct
gctttggataaatgcatgtgctcgtccctgagggtatttgtatgttcaagtttgtctaac
tttcggcatgtatgccaccctggacccctcagatccctctcaggggagatggatgaaaca
gatgctggcggattcaaacgctgcaatgatgactcaatttccctcgcttcttccatcgct
gagtccatcgttgtagaagatgccaactatggagcagtgagagttgacctcgagtcagat
gctcaggactttaaggcagactcatggagtttggaggttgacccacagtatctaaagaag
cactcgaaggaagtggtgaagaggcaggatgtgatatatgaactgatgcagacggagatg
caccacgtgcgaacactgaagataatgctgcttgtgtacgcccaagagttgaaggagaac
cttcagatggactcgagccgactggactgtctgttcccccgactggaaaccctcctggaa
cttcacacacagttcttctctcgcctcaaagagagacggcgagaaaacctcgtttccccc
agcaccaagaactacactatcaacagagtggcagacatcctaatcacacagttctcgggt
gaaataggagagaaaatgaaggaaagttatggagatttctgcagtcaccacgctgaagct
gtcagctactacaaagatcagctgcagaacaacagacggtttcagaacctcataaaaaaa
atcaacaacctgtccattgtgcgacggttaggaataacggagtgtattctgttggtgaca
cagcggattacgaagtacccagtcctggtggagcgcattctgcacaacactgaagtgggg
actgaggagcatgagaacctgactcgggcactgagtctgattaaagacaccattgtacag
gtggatgcgctggttaatctgtacgagaagaactctagacttcaagacatacacaacaag
atagagccaaaggcttcgggaaaattcaaagatggccgggtgtttcgcagggaggacctg
acgcagggcaggagacaactgcttcatgagggcacagtcagctggaaggctgcttctggc
agactcaaagatattcttgctgttctgctgtcagatgtgttgcttttaatacaagagaag
gatcagagatatgcgtttgctgcagttgataataagccaccagtgatctctctccaaaag
ctgatagtcagagaagtggcccacgaggagaaagccatgtttcttatttgtgcctcttcc
aatgagccagagatgtacgagatccacaccacctgtaaagaggagcgaaacacttggatg
acgcacattcgacaagctgttgagaactgtcctcactctgaagagaggctgttcagcgaa
gaagaggaggctcgggctgtcaggctcaaagaatttcaagagcggctgagccagaaggat
gcagtgattgttcaggctcttacagagaagctgcagctgtttgcagagatggcagagtct
gtgtccggtctggaggaagtagcttcacgttccagacttatgcttcgaggagacacctca
gacctccagcagggggagaccctgctcaaaggagccatcacggaggttgagaacctgcag
aacttgctgcagtctggagtgggggaggagactcaaccatctcggatggaggaaggtgga
ggttctggggttctgcccagacgagcagacacatttggtggctatgatagtaacccaacc
atcttcattaagaatggcagtatgaagaaaagtttttcttgcaagcccagaaaccgagac
cgaagccaaagagccagttcggaccctcagctcaaagacctgtgtggcagccacactctg
gagcagacggttgatgagacctgctgctctcctccaaggtggaactgcatctggtccaac
tcgtttcctgaagctgagttctttgacagagtgttgatgctctcccagaggctttatagc
ttgcaggccatcatatcgcagcaggacagtcagatcgagctgcagcgggcctcactgaca
gagcgggtgccgctgccaggccgtcacagaggaaacgtgcttctggagcaggagaagcag
cggactctggctctgcagagagaggagctggccaccttgcataagcttcagtctcagcac
aggcaggagcagcagcgctgggagaaggagcgggagaggcaccgccagcaggttgaggct
accgaggccaggctactgcaaagagaggaggagtgcaggcggcttgaggagcagctggcg
aaggaaagagaagagctggacatgcagagagagacgtaccagcaggacttggagagactg
agagagtccaccaaagcagtggaaaaagaaaaggaacgcctggaaaacctgaaaaagttc
aagaggaagacgattgaggtggctcctctgtctggcagtttaaacggagagctcctctca
cctcctggcctctccagctccactagtgcgtccgacttgccgctggcccataagccctta
gtgcgctccagcctgtccgtcacaccggccgactatcccgagcgccctgaggtgactctg
cggcgggaggcgggctcctccactctgcccctgaagacagaagtgccgctccatctcttc
agcaccaccaaccagcagcacaaactggtgggggtgcagcagcagatccccaccaaactg
gcagcaatcaacagtggcaaaggaaaaggggggaaggggaaagcctcgcatcgtactgac
agcacagcgtcaatggacatgaagcagatgctccctctgaaactctcctccaaagaggac
aacatcctgaaggccaagcgctccatcagcccccaccagcagcccccttctcttcatcac
cacacagatcagctgagtcctccagacagcaccggactagacactcagctcacctcctcc
gtcagctcctcccaccctcctcatgcgcagaagccccccatgccgaccacgcatccccat
cctccaccctccattcctccgcaccctcagagcactgatccccctcagttccagccccac
gtgcagaacgttcacgggctcagccacagcaaatcgcctccttacaccatccctacagaa
gacctgaataaggaggaagttatatttttttag
DBGET
integrated database retrieval system
