Nitrobacter winogradskyi: Nwi_0105
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Entry
Nwi_0105 CDS
T00276
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
nwi
Nitrobacter winogradskyi
Pathway
nwi03030
DNA replication
nwi03430
Mismatch repair
nwi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nwi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Nwi_0105
03430 Mismatch repair
Nwi_0105
03440 Homologous recombination
Nwi_0105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nwi03032
]
Nwi_0105
03400 DNA repair and recombination proteins [BR:
nwi03400
]
Nwi_0105
Enzymes [BR:
nwi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Nwi_0105
DNA replication proteins [BR:
nwi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Nwi_0105
DNA repair and recombination proteins [BR:
nwi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Nwi_0105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ABA03373
UniProt:
Q3SWG8
LinkDB
All DBs
Position
124822..125541
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AA seq
239 aa
AA seq
DB search
MREIVLDTETTGLDPLRGDRLVEIGCVEMFNRMPTGQTFHRYINPERDMPQEAFAVHGLS
SDFLADKPLFAHVVDEFLEFIGDAPLVIHNASFDISFINAELDRLKRQAIGRDRLVDTLL
LARRKHPGVSNRLDDLCSRYAIDNSRRTKHGALLDAELLAEVYIDLIGARQSQLILVETA
PRQRGGSLEMPRRQRTVPLASRVTAADRIAHREFIATLGEKAIWMEFLEQDSEKTRTGL
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaaatcgttctcgataccgaaaccaccggcctggatccgctgcgaggcgaccgc
cttgttgagatcggctgcgttgagatgttcaaccgcatgccgacgggacagacgttccac
cgctacatcaatcccgaacgtgacatgccgcaggaggcattcgcggtccatggcctgtcg
agcgattttctcgccgacaaaccgctgtttgcgcacgtcgtcgatgagtttctggagttt
atcggtgatgcgcccttggtcattcacaacgcatcgttcgatatcagcttcatcaatgcc
gagcttgatcgtcttaaaaggcaagcgatcggccgcgatcggctggtggatacgctgttg
ctggcgcgtcggaagcatcccggcgtctcgaaccggctggacgatctgtgctcgcgctat
gccatcgacaacagccgtcggaccaagcacggcgcattgctggacgccgaactgctggcg
gaagtctatatcgatctgatcggcgcgcgccagtcgcaattgatcctggtggaaactgcg
ccccgccagcgcggcgggtcattggaaatgccaagacgccagcgaaccgtgccgctggcg
tcacgcgtcaccgcggccgaccgcatcgcgcatcgggagttcatcgctacactcggcgag
aaggcgatttggatggaattcctggaacaggactccgaaaagaccagaaccggcctgtag
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