Nitrobacter winogradskyi: Nwi_0171
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Entry
Nwi_0171 CDS
T00276
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
nwi
Nitrobacter winogradskyi
Brite
KEGG Orthology (KO) [BR:
nwi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nwi03016
]
Nwi_0171
Enzymes [BR:
nwi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Nwi_0171
Transfer RNA biogenesis [BR:
nwi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Nwi_0171
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ABA03439
UniProt:
Q3SWA2
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All DBs
Position
197468..198088
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AA seq
206 aa
AA seq
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MTIRLHRGDLPHQDLARYTGSAAIDTETMGLKPHRDRLCVVQMSPGDGSADVIQIARGQR
DAPNLIKLLKDPAIVKIFHFARFDLAALYNAFGVMPRPVYCTKIASRLIRTYTDRHGLKD
LVRELLSIDLSKQQQSSDWGSPTLSDAQLAYAASDVLHLHALRDKLEATLAREDRSALAQ
ACFEFLPSRAMLDLAGWETEDIFAHS
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccgcctgcaccgcggcgacctgccgcatcaggatcttgcgcgctacaccggt
tcggcggcgatcgataccgagaccatggggctcaagccgcaccgcgaccggctgtgcgtg
gtgcagatgtcgccgggcgacggttcggccgacgtgatccagatcgcgcgcgggcagcgt
gacgcgccgaacctgatcaagcttctcaaagaccctgccatcgtcaagatcttccacttc
gcgcgattcgacctcgccgcgctgtacaacgcattcggcgtgatgccccggccggtctac
tgcaccaagatcgcctcgcggctgattcgcacctacaccgatcggcacggcctgaaggat
ctcgtgcgcgaactgctcagcatcgacctgtcgaagcagcagcaatcgagcgactgggga
tcgccgaccctgagcgacgcgcagctggcctatgccgcgtccgatgtgctgcatctgcac
gccttgcgcgataagctcgaggccaccctggcgcgcgaggatcgctcagcgctcgcgcag
gcgtgtttcgagttcctgccgtcgcgggcgatgctcgatctggccggctgggaaaccgaa
gacatcttcgcgcactcataa
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