Nitrobacter winogradskyi: Nwi_1388
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Entry
Nwi_1388 CDS
T00276
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
nwi
Nitrobacter winogradskyi
Pathway
nwi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nwi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Nwi_1388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nwi03021
]
Nwi_1388
03400 DNA repair and recombination proteins [BR:
nwi03400
]
Nwi_1388
Enzymes [BR:
nwi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Nwi_1388
Transcription machinery [BR:
nwi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Nwi_1388
DNA repair and recombination proteins [BR:
nwi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Nwi_1388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
RNA_pol_L_2
IDH
DUF4249
Motif
Other DBs
NCBI-ProteinID:
ABA04649
UniProt:
Q3SSU2
LinkDB
All DBs
Position
1513305..1514324
Genome browser
AA seq
339 aa
AA seq
DB search
MTIQKNWQELIRPNKLQVVPGSDPSRFATLIAEPLERGFGQTLGNALRRILLSSLQGAAV
QSVHIDGVLHEFSSIAGVREDVTDIVLNIKDIAIRMQGEGPKRMVVKKQGPGTVTAGDIQ
TVGDVVVLNPDLQICTLDDGAEIRMEFTVASGKGYVAAERNRPEDAPIGLIPVDSLYSPV
RKVSYKVENTREGQILDYDKLTMTIETNGGVTPEDAVAFAARILQDQLNVFVNFEEPRKE
VTTEIIPDLAFNPAFLKKVDELELSVRSANCLKNDNIVYIGDLVQKSEAEMLRTPNFGRK
SLNEIKEVLAQMGLHLGMEVPGWPPENIDELAKRFEDHY
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgacgatccagaaaaattggcaagagcttatccggccgaacaagctgcaggtcgttccc
ggcagcgatccctcgcgctttgcgaccctgatagccgagccgcttgaacggggtttcggc
cagacgctcggcaacgcgttgcgccgcatcctgctgtcctcgctgcaaggcgcggcggtg
cagtcggtgcacatcgatggcgtcctgcacgaattctcctccatcgcgggcgttcgcgag
gacgtcaccgacatcgtgctgaacatcaaggacatcgcgatcaggatgcagggcgaaggc
cccaagcgcatggtcgtgaagaagcagggtcccggcaccgtcaccgcgggcgatatccag
accgtcggcgacgtcgtggtgctcaaccccgaccttcagatctgcaccctcgacgatggc
gctgaaattcgcatggagttcaccgtcgcttccggcaagggctatgtcgccgccgagcgt
aatcggccggaggatgcgccgatcggattgatcccggtcgacagcctgtattcgccggtg
cgaaaggtttcgtacaaggtcgaaaacacgcgtgagggtcagattctcgactacgacaag
cttaccatgaccatcgaaaccaatggcggggtgacgcccgaggatgccgtggctttcgcc
gcgcgcattcttcaggaccagctcaacgttttcgtcaacttcgaggaaccgcgcaaggaa
gtcaccaccgagatcattccggacctggcgttcaatccggctttcctcaagaaggtcgac
gaactggaattgtcggtacgctccgcgaactgcctgaagaacgacaacatcgtttatatc
ggcgatctggtgcagaagtcggaagcggagatgctgcgcaccccgaacttcggacgcaag
tcgctgaacgagatcaaggaagtgctggcccagatggggttgcacctcggcatggaagtg
ccgggctggccgccggaaaatatcgacgaactggcgaagcgtttcgaggaccattactga
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