Nitrobacter winogradskyi: Nwi_1589
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Entry
Nwi_1589 CDS
T00276
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
nwi
Nitrobacter winogradskyi
Brite
KEGG Orthology (KO) [BR:
nwi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nwi03016
]
Nwi_1589
Enzymes [BR:
nwi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Nwi_1589
Transfer RNA biogenesis [BR:
nwi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Nwi_1589
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
ABA04850
UniProt:
Q3SS91
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All DBs
Position
1736709..1737857
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AA seq
382 aa
AA seq
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MDLITTSAELASVCARLARHPVITVDTEFLRETTYYPLLCVIQLASPDEAVVVDALAGGI
DLKPFFALMSNESVLKVFHAARQDIEIIWHQAGLIPHPVFDTQVAAMVLGHGDSIAYDAL
VERITGHRPDKTHRFTDWSRRPLTAEQLEYAVADVTHLRDVFAALDADLSKRGRSDWVSE
EMEVLTSPKTYDFHPERAWERLKSRVRKPKDLAVLMEVAAWREQEAQSRNIPRSRVLKDD
AVGDIAIHAPSSPERLATLRSLPKGFERSQWGADIVAAVQRGLARDPRTLPRIEKPRNNS
NGAATVELLKVLLRMTSERHAVASKVIATVDDLERIVADDEADVGALHGWRRELFGEAAL
ALKHGRLALAIEKGRVVRVERA
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggatctgattaccacctccgcggagctggcctccgtctgcgcccgcctcgccaggcac
ccggtcattaccgtcgacaccgagttcctccgcgaaaccacctactatcccctgctctgc
gtcattcagctggcaagtcccgatgaagccgtggtggtcgatgctctcgccgggggaatc
gacctgaagccgtttttcgctctgatgtcgaacgaaagcgtcctcaaggtcttccacgct
gcacggcaggatatcgagattatctggcaccaggccgggcttatcccccatcctgtcttc
gacacccaggttgccgccatggtgctgggacacggcgattccattgcctatgacgcgctg
gtcgagcgtattaccggacaccgtccggacaagacccaccgattcaccgactggtcgcgc
cgtccgctgaccgcggaacaactcgaatacgccgtggcggatgtcactcacctccgcgac
gtctttgccgccctcgacgccgatctcagcaagcgcggacgcagcgattgggtcagcgag
gagatggaggtcctgacgtcgccgaagacctacgactttcatcccgaacgtgcatgggaa
cgattgaagagccgggtccgcaagccgaaggaccttgccgtcctgatggaagtggcggcc
tggcgcgaacaggaagcccagagccgcaatattccacggtcccgtgttctgaaggacgac
gccgtcggcgatatcgcgatccatgcgccgagtagcccggaacggttggcgacgctgcgt
tcgctgcccaagggttttgaacggtcgcaatggggcgctgatatcgtcgcggcggtccag
cgcgggcttgcacgagacccgcgcacgctgccccggatcgagaagccccgcaacaattcg
aacggcgccgccacggtggagcttctcaaggttttgctgcgcatgacgtccgagcgccat
gctgtcgccagcaaggtgatcgcgacggtggatgacctggaacggatcgtcgccgatgac
gaggccgatgtcggtgcgctgcacgggtggcggcgtgaactgtttggcgaggccgccctc
gccctgaagcatggccggctggctctggcgatcgaaaagggccgcgtggtgcgcgtggag
cgagcgtag
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