Nitrobacter winogradskyi: Nwi_1645
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Entry
Nwi_1645 CDS
T00276
Name
(GenBank) exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
nwi
Nitrobacter winogradskyi
Pathway
nwi03410
Base excision repair
nwi03430
Mismatch repair
nwi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nwi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Nwi_1645
03430 Mismatch repair
Nwi_1645
03440 Homologous recombination
Nwi_1645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nwi03400
]
Nwi_1645
DNA repair and recombination proteins [BR:
nwi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Nwi_1645
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Nwi_1645
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Nwi_1645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ABA04906
UniProt:
Q3SS35
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All DBs
Position
complement(1787070..1788911)
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AA seq
613 aa
AA seq
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MTLPASALPVEAPDAFLGVSHSATGRLWRDRLDPRGAARALAIAQRHQLPEMLARVIAGR
GVDIDAVTDFLDPTIRRLMPDPFTVTQMETAAQRIADAAMRGETVAIFGDYDVDGATSAA
LLAWHLRHCGLDPLIHIPDRIFEGYGPNVDAVDALAGRGATLLVTVDCGTTSIEPLAVAR
QRGMSVVVIDHHQCGDDLPEVEALVNPNRPDDLSGLGHLAAVGLVFITLVALNRELRQRG
FWSRERPEPNLLDMLHHVALGTVADVAPLTGLNRAFVAKGLIALRRRDHVGHTALMDVAR
LSGPPEAWHLGFMLGPRINAGGRIGRADLGVRLLLEGDVSEAARIAAELDRLNAERRVIE
QTAEAQAEAEALASLGLEDKGSVIVTASEGWHPGVVGLVASRLKDKFARPAFVVALEPGG
IGTGSGRSIGGVDLGKAVRRAVTDGVLLKGGGHAMAAGVTLRKEQLAEFRAYMETALAAD
VARSRHVRKLFIDGAVSARAATPEFVATLNRAGPFGAGNPEPVVALPSHQLIHADEIGQA
HLRLRFRSGDGAIVNGIAFRAVGQPLGNALARMRGQPLHVAGSLAVDRWQGAERVQLRVV
DVAAPDPGPKTIR
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgaccttgccagcctccgcattgcctgtcgaagcgcctgacgcctttcttggcgtatcg
cattcagcgacgggccgtctgtggcgcgatcgcctcgatccgcggggcgcggcgcgcgcg
ctggcgatcgcacaacggcatcagttgccggagatgctggcgcgggtgattgccggacgc
ggcgtcgacatcgatgcggtcacggattttctcgaccccaccatccgccggctgatgccc
gatcctttcaccgtgacgcagatggagaccgccgcgcagcggatcgcggatgccgcgatg
cgcggtgagacagtcgcgatcttcggtgattatgacgtcgatggcgcgacctcggcggcg
ttactcgcctggcatctgcggcattgcggacttgacccgctgatccatatccccgaccgc
attttcgaaggctatggtccgaatgtcgatgcggtcgacgcgctcgcgggcaggggcgcg
accttgctggtgaccgtggactgcggcacgaccagtatcgagccgctggcggttgcaagg
cagcggggcatgtcggtcgtcgtgatcgaccatcaccaatgcggcgacgacctgcccgag
gtcgaggcgctggttaatccgaaccgccccgacgatctttccggcctgggccatctcgcg
gccgtcggtctcgtttttatcacgctggtcgcgctgaaccgcgagctccgccagcgcggt
ttctggagccgcgagcggcccgaaccgaatctcctggacatgctgcatcacgtcgcgctc
ggaacggtggccgacgtcgcgccgctgaccggtctcaaccgcgctttcgtggcgaaggga
ttgatcgcgctgcgccgccgcgatcatgtcggccacaccgccctgatggatgtggcgcgg
ctgagcggcccgccggaagcctggcatctcggcttcatgctgggaccgcgcatcaacgcc
ggcggccggatcgggcgcgccgacctcggggtacggctgctgctggaaggcgatgtgtcc
gaagccgcgcggatcgccgccgaactcgatcgtctcaatgcggaacgccgcgtgatcgaa
cagacggccgaagcgcaggccgaagccgaggcgctggcctcgctcggtctggaggacaag
ggctccgtcatcgtcaccgcctccgagggctggcatcccggcgtggtcggtctcgtggcg
tcgcggctgaaggacaaattcgcgcggccagcttttgttgtcgcgctggagcccggcggc
atcgggaccggatcgggccgctccatcggcggcgtcgatctcggcaaggcggtgcggcgg
gccgtgacggacggcgtgctgctcaagggcggcggccatgccatggcggctggcgtgacg
ttgcggaaagagcagcttgcggaattccgcgcctatatggaaacggcgctcgccgccgat
gtcgcgcggtcgcgccatgtccgcaagcttttcatcgatggcgcggtcagcgcgcgggcg
gcgacgcccgaattcgtggcgacgctcaatcgcgcgggaccgttcggcgcgggcaacccc
gagccggtggtggcgttgccatcgcaccagttgatccatgccgacgagatcgggcaggcg
catctccggttacggttcaggtccggtgacggcgcgatcgtgaacggcatcgcgtttcgc
gcggtcggtcagccgctgggcaacgctctcgcccggatgcggggccagccgttgcatgtc
gcgggatcgctggcggtggaccgctggcagggcgcggagcgcgtgcagttgcgcgtggtg
gatgtcgcggcgccagatccgggaccgaagacaattcgttaa
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