Nitrobacter winogradskyi: Nwi_1860
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Entry
Nwi_1860 CDS
T00276
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
nwi
Nitrobacter winogradskyi
Pathway
nwi03030
DNA replication
nwi03430
Mismatch repair
nwi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nwi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Nwi_1860
03430 Mismatch repair
Nwi_1860
03440 Homologous recombination
Nwi_1860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nwi03032
]
Nwi_1860
03400 DNA repair and recombination proteins [BR:
nwi03400
]
Nwi_1860
Enzymes [BR:
nwi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Nwi_1860
DNA replication proteins [BR:
nwi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Nwi_1860
DNA repair and recombination proteins [BR:
nwi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Nwi_1860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
T2SSK
HROB
HHH_3
Motif
Other DBs
NCBI-ProteinID:
ABA05120
UniProt:
Q3SRH1
LinkDB
All DBs
Position
complement(2039205..2042711)
Genome browser
AA seq
1168 aa
AA seq
DB search
MTQKTLAAPAGFVHLHVHSAYSLLKGSIKIQKLAELARADHQPALALTDTDNMFGALEFS
DKVAGLGIQPIVGCELAVDFTDQDANARNALPPARIVLLATREAGYRNLMRLNSRAFLET
PEHCSPHVNWEWLRDENEGLIALTGGPEGPVAQAFNADQPALATARCDRLAGIFGDRLYV
ELQRHGLDKERRVEGALIDLAYAKGLPLVATNEPYFATSDDYEAHDALLCIAGGRLVAET
DREQLTPDHRFKTRAEMAVLFADIPEALSSTMEIAERCAFRPRTRKPILPHFTVASDAAA
ADGKNDEAAELRRQAQEGLAKRLAVHGVSTGMTEQDYSARLDFELDVITRMNYAGYFLIV
ADFIKHAKSKGIPVGPGRGSGAGSLVAYALTITDLDPIRFGLLFERFLNPERISMPDFDI
DFCQERRGEVIDYVQKRYGRDQVAQIITFGTLQARGVLRDVGRVLQMPYGQVDKLTKLVP
QNPAAPVSLKQAIEGEPKLQAFRDEDPVVARAFDIAQRLEGLTRHASTHAAGIVIGDRPL
SELVPLYRDPKSDMPVTQFNMKWVEPAGLVKFDFLGLKTLTVLDVAVKLLKQRGIDVDLA
TLPLDDAASYQMLTQGDVVGVFQVESQGMRRALVDMRPDRFEDIIALVALYRPGPMANIP
TYCARKHGEEEAEYLHPMLEPILKETFGVIIYQEQVMQIAQVMAGYSLGDADLLRRAMGK
KIRSEMEKQRAIFVAGSVNNGVPRGQAETIFELLAKFADYGFNKSHAAAYALVSYQTAYM
KAHFPVEFLAASMTLDMSNTDKLSEFRAEAQRLGIKVEAPSINRSGATFEVKEGVICYAL
AALKGVGAHAVEQIVEARKAGMFTSLADFAARVPPRAINKRVIESLAAAGAFEALEPNRA
RVFAGAEAILAACQRSHEATMIGQNDMFGGLADAPDIMLPRAEPWLPADRLRREYEAVGF
FLSGHPLDDYATALKRLRVQSWVEFSRAVKSGATAGKVAATVVSRMERRTKTGNKMGIIG
LSDPSGHFEAVLFSEGLAQFREVLEPGAAVLLQLDAELQGEEVRARVSRAEPLDDAAAKT
QKGLRIFLRDSRPLESIEKRLQANDNGDPAGAAKVPASRQAGEGEVSLVMMLDLETEVEI
KLPGRFRVSPQIAGAIKAVTGVVDVQAI
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgacccagaagaccctcgcggctcccgcaggtttcgttcacctgcatgtccattcggcc
tattccttgttgaagggctcgatcaagatccagaagctggcggaactggccagggcggac
caccagccggccctggcgctcactgacaccgacaacatgttcggagcgctggaattctcc
gacaaagtcgcaggccttggcatccagccgatcgtcggctgtgaactggcggtggacttc
acagatcaggatgccaatgcccgaaacgcgctaccgcctgcccgaatcgtcctgctggcg
acgcgcgaagccggctatcgtaacttgatgcggttgaactcccgcgccttcctcgaaaca
ccggagcattgcagccctcacgtcaattgggagtggctacgggatgaaaacgaaggtctg
atcgccttgaccggagggcccgagggtcccgtggcgcaggcgttcaacgccgatcagccc
gcgcttgcgacggcccgctgcgaccggctcgccgggattttcggcgaccggctttacgtg
gagttgcagcgccatgggctcgacaaggagcggcgggtcgaaggtgcattgatcgacctc
gcctatgcgaagggccttccgctggttgcgaccaacgagccgtattttgcgacctccgat
gattatgaagcccatgacgccttgctatgcatcgccggcggtcgcctggttgcggagacc
gatcgcgagcaattgacgccggatcaccgcttcaagacccgcgcggaaatggctgtcctg
tttgctgacatcccggaagcgttgtcgtccacgatggaaatcgcggaacgttgcgcgttc
cggccgcggacgcgcaagccgatccttccgcactttacggtggcctcggacgccgccgcg
gcggacgggaaaaacgatgaagccgccgaattgcggcgacaggcgcaggagggacttgcg
aagcggctggcggtgcatggcgtctcgaccggaatgacggagcaggactacagcgcgcgc
cttgacttcgaactcgatgtcatcacgcgcatgaattacgcgggctacttcctcatcgtc
gcggacttcatcaagcacgccaagtccaagggaattccggttgggccggggcggggctcc
ggcgccggctcattggtggcctatgcgctcacgatcaccgatctcgatccgatccgcttc
ggcctgctgttcgagcgcttcctcaatcccgaacggatatcgatgccggacttcgatatc
gacttctgccaggagcggcgcggggaggtcatcgactacgtgcagaagcgctacggccgc
gaccaggtcgcgcagatcatcacctttggcacgttgcaggcgcggggcgtgctgcgcgac
gtcggccgcgtcctgcagatgccttacggtcaggtggacaagctgaccaagctggtgccg
caaaatcccgcggcgccggtctcgctgaagcaggccatcgagggagagccgaaactacag
gcgtttcgtgatgaggacccggtggtggcgcgcgcgttcgatatcgcccagcgcctcgaa
ggcctgacgcgtcacgcctcgacccatgcggcgggcatcgtgatcggcgatcggcccttg
agcgaactcgtgccgctgtatcgcgatccgaagtccgacatgccggtgacccagttcaac
atgaagtgggtggagccggcgggcctcgtgaagttcgacttcctcggcctgaagacgctg
accgttcttgacgtcgcggtgaagttgctgaagcagcgggggatcgacgtcgatcttgcc
acgctgccgcttgacgacgcggccagctaccagatgctgacccagggcgacgtggtcggc
gtgtttcaggttgaaagccagggcatgcgacgggcgctggtggacatgcgtccggaccga
ttcgaggacatcatcgcgctggtcgcgctgtatcgaccggggccgatggcgaatattccg
acctattgcgcgcgcaagcatggcgaggaggaagcggaatatcttcatccgatgctcgag
ccgatcctgaaggagaccttcggcgttatcatctatcaggaacaggtgatgcagatcgcc
caggtcatggccggctactcgctcggagacgccgacctgctgcggcgggcgatgggtaag
aagattcgctcggagatggagaagcagcgcgcgatcttcgtggcgggctccgtcaacaac
ggcgttccccgaggccaggcggaaacgatctttgagctgctggcgaagttcgctgattac
ggtttcaacaaaagccacgccgcggcctatgcgctggtctcctatcagaccgcgtacatg
aaagcgcactttcccgtcgagtttctggcggcatcgatgacgctcgatatgagcaacacc
gacaagctttcggagtttcgcgcggaggcccagcgcctgggcatcaaggtcgaagcgccg
tcgatcaatcgctccggtgcgaccttcgaggtgaaggaaggcgtcatctgttatgcgctg
gccgcgctgaaaggggtcggcgcgcacgcggtcgagcagatcgtcgaagctcgcaaggcc
ggcatgttcacttcgctggcggatttcgccgccagggtgccgccgcgcgccatcaacaag
cgcgtcatcgaaagtctcgcggccgccggagcgtttgaggcgctcgagccgaaccgcgcc
cgtgtgttcgccggcgccgaggcgatccttgctgcgtgccagcgcagccacgaggcgacg
atgatcggccagaatgacatgttcggcggtctggcggacgcgccagacatcatgctgcct
cgggcggagccctggctgcccgccgatcggctgaggcgcgaatatgaggcggtcggattt
ttcctgtcgggacatccgctcgacgattatgcgacagcgctcaagcggctccgcgtccag
tcgtgggtcgaattttcccgcgcggtgaagtcaggtgcgaccgccggcaaggtggctgcg
acggtggtttcgcggatggagcggcgaaccaagacgggtaacaagatgggcatcatcggc
ctgtccgatccgagcggccatttcgaggcggtgctgttctcggaaggtctcgcgcagttt
cgggaggtccttgaaccgggggcagcggtgctgttgcaactcgatgcggaattgcaggga
gaggaggtgcgggcgcgggtgtcccgtgccgaaccgctcgacgatgcggcggccaagacg
cagaagggactgcggattttcctgcgcgattccaggccgctcgagtcgatcgaaaagcgt
cttcaggcgaacgacaacggggatccggctggcgccgcgaaagttcccgcatcgaggcag
gctggcgagggcgaggtctcgctggtgatgatgctggaccttgagaccgaggtggaaata
aagcttcctggccgctttcgggtttcgcctcagattgccggcgcgatcaaggcggtcacg
ggggtcgtggatgttcaggctatctga
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