Nitrobacter winogradskyi: Nwi_2192
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Entry
Nwi_2192 CDS
T00276
Name
(GenBank) chaperonin Cpn60/TCP-1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
nwi
Nitrobacter winogradskyi
Pathway
nwi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nwi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Nwi_2192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwi03019
]
Nwi_2192
03110 Chaperones and folding catalysts [BR:
nwi03110
]
Nwi_2192
03029 Mitochondrial biogenesis [BR:
nwi03029
]
Nwi_2192
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nwi04147
]
Nwi_2192
Enzymes [BR:
nwi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Nwi_2192
Messenger RNA biogenesis [BR:
nwi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Nwi_2192
Chaperones and folding catalysts [BR:
nwi03110
]
Heat shock proteins
HSP60 / Chaperonin
Nwi_2192
Mitochondrial biogenesis [BR:
nwi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Nwi_2192
Exosome [BR:
nwi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Nwi_2192
Exosomal proteins of other body fluids (saliva and urine)
Nwi_2192
Exosomal proteins of breast cancer cells
Nwi_2192
Exosomal proteins of colorectal cancer cells
Nwi_2192
Exosomal proteins of bladder cancer cells
Nwi_2192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ABA05446
UniProt:
Q3SQJ5
LinkDB
All DBs
Position
2385288..2386925
Genome browser
AA seq
545 aa
AA seq
DB search
MSAKDVKFGVDARDKMLRGVDILANAVKVTLGPKGRNVVLEKSFGAPRITKDGVTVAKEI
ELDDKFENMGAQMVREVASKSADAAGDGTTTATVLAQAIVKEGAKSVAAGMNPMDLKRGI
DLAVEAVVADLSRNSKKVTSNEEIAQVGTISANGDSEIGKFLADAMKKVGNEGVITVEEA
KSLETELDVVEGMQFDRGYISPYFVTNAEKMRVEMDDAYILINEKKLSSLNELLPLLEAV
VQTGKPLVIVAEDVEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLQDIAILTGGQA
ISEDLGIKLENVTLQMLGRAKKVMIDKENTTIVNGAGKKADIEARVAQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAMHATRAAVEEGIVPGGGVALL
RASEQLKRIKTQNDDQKTGVEIVRKALSAPARQIAINAGEDGSVIVGKILEKEQYSYGFD
SQTGDYGNLISKGIIDPTKVVRTAIQNAASVASLLITTEAMVAELPKKNSPAPAMPGGGM
GGMDF
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccaaagatgtcaaattcggcgtcgacgctcgcgacaagatgctgcgcggcgtg
gacatcctcgccaatgccgtgaaggtgacgctgggtccgaagggccgcaacgtcgtgctc
gaaaagtcgttcggcgcgccccgcatcaccaaggacggcgtcaccgtcgccaaggaaatt
gagcttgacgacaagttcgagaacatgggcgcgcagatggtgcgcgaagtcgcctccaag
tcagcagacgcggccggcgacggcaccaccaccgcgacggttctggcccaggcaatcgtg
aaggaaggcgccaagtcggtcgccgccggcatgaacccgatggacctgaagcgtggtatt
gatctcgccgtcgaagccgtggtcgcagacctcagccgcaactccaagaaagtcacctcg
aacgaggaaatcgcccaggtcggcaccatctcggccaacggcgattccgaaatcggcaag
ttcctcgccgacgccatgaagaaggtcggcaacgagggtgtcatcaccgtcgaggaagcc
aagtcgctggagaccgaactcgatgtcgtcgagggcatgcagttcgaccgcggctacatc
tcgccctacttcgtcaccaacgccgaaaagatgcgcgtcgagatggacgacgcctacatc
ctgatcaacgagaagaagctgtcctcgctgaatgaactgctgccgctgctcgaagccgtg
gtgcagaccggcaaaccgctggttatcgtcgcggaagacgtcgagggcgaggctctggcg
acgctggtggtcaaccgcctgcgcggcggcctcaaggtcgcggccgtcaaggcgccaggc
ttcggcgaccgccgcaaggccatgctgcaggacatcgcgatcctgaccggcggtcaggcg
atcagcgaagacctcggcatcaagctcgagaacgtcacgctgcagatgctcggccgcgcc
aagaaggtgatgatcgacaaggaaaacaccacgatcgtcaacggcgccggcaagaaggcc
gacatcgaggcgcgcgtggcgcagatcaaggcgcagatcgaggagaccacctcggactac
gaccgcgagaagctgcaggagcgtctggccaagctcgcgggcggcgtcgcggtgatccgc
gtcggcggcgcgaccgaggtcgaggtgaaggagcgcaaggatcgcgtggacgacgcgatg
cacgcgacccgcgcggcggtcgaggaaggcatcgtgccgggcggcggcgtcgccctgctc
cgtgcttccgagcagctcaagcgcatcaagacccagaacgacgaccagaagaccggcgtc
gagatcgtgcgcaaggcgctgtccgcgccggcccgccagatcgcgatcaacgcgggcgag
gacggcagcgtcatcgtcggcaagatcctcgagaaggagcagtattcctacggcttcgac
tcgcagaccggcgactacggcaacctgatctccaagggcatcatcgacccgaccaaggtc
gtgcgcaccgcgatccagaacgccgcatccgtcgcctcgcttctgatcaccaccgaagcg
atggtcgccgaactgccgaagaagaacagccctgccccggcgatgccgggcggcggcatg
ggcggcatggatttctga
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