Nocardia wallacei: NWFMUON74_54540
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Entry
NWFMUON74_54540 CDS
T07034
Name
(GenBank) hypothetical protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
nwl
Nocardia wallacei
Pathway
nwl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nwl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NWFMUON74_54540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwl03019
]
NWFMUON74_54540
03009 Ribosome biogenesis [BR:
nwl03009
]
NWFMUON74_54540
Enzymes [BR:
nwl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
NWFMUON74_54540
Messenger RNA biogenesis [BR:
nwl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NWFMUON74_54540
Ribosome biogenesis [BR:
nwl03009
]
Prokaryotic type
rRNA processing factors
NWFMUON74_54540
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
IF2_N
S1
DUF7414
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
BCK57682
UniProt:
A0A7G1KR95
LinkDB
All DBs
Position
complement(6064238..6067675)
Genome browser
AA seq
1145 aa
AA seq
DB search
MADQEPLGTSKSNGESASDEAAGAGEAAQLPERIRVHALAKLLGTTSKRILAHLTELGAE
ARSAQSSLDRRVAESVREALVPETSESSSAPAAEDAAPADTAEPAEPERSEASTRTAVSV
GTAAASGDAESADPSSETAETLAVPDRPLRQSLFTSPFHAPEPPAPEPVAFEPPAVVAAP
LFLPPDATAAQEMRRKLRAERQSPPAEAKAAPVEEAEADRPAPEEPSRPAEQRAEDADTD
ADDAGNAWDDDQSRDDGDDSNRSRRRRRGRRGRGRGRGEQHSDQDDEAEDDQNSESESDS
AAEDDESAENGSDDGDAVPEGSSRRRRRRRRRKAGEDAEPEASEDDPPNTVVHEREPRNK
RRGSGDEVQGITGSTRLEAKRQRRRDGREAGRRRPPILTESEFLARRESVDRVMVVREKT
FPEHPAATVQVAVLEDNILVEHFVTSSGQASMVGNVYLGKVQNVLPSMEAAFVDIGRGRN
GVLYAGEVNWEAAGLGGKERKIEQALKPGDTVLVQVSKDPVGHKGARLTTQISLAGRFLV
YVPGGSSTGISRKLPDTERKRLKEILRDIVPQDAGVIIRTASEGVAETELARDVERLQAT
WKTIEEQSKNGSGAPKTLYEEPDLLVKVIRDLFNEDFSKLVIEGDRSWTTVENYIRTVAP
DLLARVERHENPNVDVFGSFRIDEQLAKALDRKVWLPSGGTLVIDRTEAMTVIDVNTGKF
TGAGGSNLEETVTRNNLEAAEEIVRQMRLRDIGGMIVVDFIDMVLESNRDLVLRRLTEAL
GRDRTRHQVSEVTSLGLVQMTRKKLGTGLVEAFSTTCEHCHGRGILVHNYPVETPAAEES
SGRREGRRRRKDKAPAPVPAVPATNGTAVSAEPHSEEDAAAKRAHPVALAMAAHQAEEAA
SVATAEAEVAVAAAEAVQEAAEADLEVVASTAAQADSSTGRAADRAGSEEGTPGRSRRRA
RRGSRSAALRAEANAAEAPSSTAGEAAAAESDVASETPAVSGAAPESVVTSGAEPETVES
GVAAAESTDAESADVDAAAAAVGGAAADATGGAGVSDETAAGVAGAALAGEQTGAQATRR
GRRRVARTGAALSTDSQAAVFVLSSAEQEQPTVDFTDIPAAPVEPRSRPRRRSAGRAAGA
PEQPN
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
gtggccgatcaagagccgctgggaacgtcgaaaagtaatggtgaatccgcttctgacgag
gcggccggggcaggggaggcggcgcagttgcccgaacgtatccgggtccatgcgctggcg
aaactgctcggcaccaccagcaaacgcattctggcccacctgaccgaactgggcgccgag
gcccgcagcgcgcagtccagcctggaccgcagggtggccgaatcggtgcgggaggcgctc
gtccccgagacgtccgagtcgagcagcgccccggccgccgaggacgccgcgcctgccgat
accgcggagcccgccgagccggagcgctcggaggcgtcgacgcggaccgcggtatccgtc
ggcacggcggcagcgagcggtgacgcggagtccgccgacccctcgtcggagacggccgag
acgctggccgtcccggatcgcccgctgcggcagtcgctgttcaccagccccttccacgcc
cccgaaccgcccgctcccgaacccgtcgccttcgagccgcccgcggtggtggccgccccg
ctgttcctgccgcccgacgcgaccgccgcccaggagatgcggcgcaagctgcgcgccgag
cggcagtccccgcccgcggaagcgaaggccgcgccggtcgaggaggccgaggccgaccgg
cccgccccggaagagccgagcagaccggccgaacagcgggccgaagacgccgacaccgat
gccgacgacgccgggaacgcgtgggacgacgaccagtcccgcgacgacggtgacgacagc
aatcgctcccgccgccgtcgccggggccgccgcggccgcggtcgcggtcgtggcgaacag
cacagcgaccaggacgacgaggccgaggacgaccagaactccgagtccgagtccgattcc
gccgccgaggacgacgagtccgccgagaacgggtccgatgacggcgacgccgtgccggag
ggctccagccgccgccgtcgccgtcgccgtcgccgcaaggcgggcgaggacgccgagccc
gaggcgagcgaggacgatccgccgaacaccgtcgtgcacgagcgcgagccgcgcaacaag
cgccgcggttccggcgacgaggtgcagggcatcaccggctccacgcggctcgaggccaag
cgacagcgccgccgcgacgggcgcgaggccggccgccgccgcccgccgatcctgaccgag
tcggagttcctggctcgccgcgaatcggtggaccgggtcatggtggtgcgcgagaagacc
ttccccgaacatccggccgccaccgtccaggtcgccgtgctcgaggacaacatcctcgtc
gagcacttcgtgaccagcagtggccaggcgtccatggtcggcaacgtgtacctgggcaag
gtgcagaacgtgctgcccagcatggaggccgcgttcgtcgacatcgggcgcggccgcaac
ggcgtgctgtacgcgggcgaggtgaactgggaggccgccgggctcggcggcaaggagcgc
aagatcgagcaggcgctcaagcccggcgacaccgtgctggtgcaggtctccaaggacccg
gtcgggcacaagggcgcccggctgaccacgcagatctcgctggccggtcgcttcctggtg
tacgtgccgggcggctcgtccaccggtatcagccgcaagctgcccgacaccgagcgcaag
cggctcaaggagatcctgcgcgacatcgtgccgcaggacgccggggtcatcatccgcacc
gcgtccgagggcgtcgccgagaccgagctggcccgcgacgtggagcggctgcaggccacc
tggaagaccatcgaggagcagtccaagaacggctcgggagcgccgaagacgctctacgag
gagcccgacctgctggtcaaggtgatccgcgacctgttcaacgaggacttctccaaactg
gtcatcgagggcgaccggtcctggaccaccgtggagaactacatccgcacggtggcgccg
gacctgctggcccgcgtcgagcggcacgagaacccgaacgtcgacgtcttcggcagcttc
cgcatcgatgagcaactggccaaggcgctcgaccgcaaggtgtggctgccctccggcggc
accctggtcatcgaccgcaccgaggccatgaccgtcatcgacgtcaacaccggaaagttc
accggcgcgggtggcagcaacctggaagagacggtcactcgcaacaacctggaggcggcc
gaggagatcgtgcggcagatgcgcctgcgcgacatcggcggcatgatcgtcgtcgacttc
atcgacatggtgctcgagtcgaaccgggatctggtgctgcgccgcctgaccgaggcgctg
gggcgcgaccgcacccggcaccaggtgtccgaggtgacatcgctggggctggtgcagatg
acccgcaagaagctgggcaccggtctggtcgaggcgttctccaccacctgcgagcactgc
cacggacgcggcatcctggtgcacaactatccggtcgagaccccggccgcggaggagagc
agcgggcgccgcgagggtcggcgccgtcgtaaggacaaggcgccggcgcccgtcccggcc
gtgcccgccaccaacggcaccgccgtatcggccgagccgcattccgaggaggacgcggcc
gccaagcgggcgcacccggtggcgctggcgatggccgcgcatcaggccgaggaggccgcc
tcggtggcgaccgccgaggccgaggtcgcggtggcggccgcggaagcggtgcaggaagcc
gccgaggccgatctcgaggtggtggcttcgactgcggcgcaggcggattcgagcacgggc
cgggccgccgatcgggcgggctcggaagagggaacgcccggtcggtcgcggcggcgggcc
cggcgtggcagccggtcggccgcacttcgggccgaggcgaacgccgctgaggccccgagt
tcgacggcaggcgaggccgcagcggccgaatccgatgtggcgtccgaaactccggcagtg
tccggtgcggcgccggagtccgtcgtgacttcgggggccgagcccgagacggtcgagtcc
ggcgtcgcggcggccgaatccaccgatgccgaatccgctgatgtggatgccgcggctgct
gccgtcggcggcgccgcggccgacgcgaccggtggcgccggggtttccgacgagaccgcg
gccggagtcgccggtgcggctcttgccggtgagcagaccggtgcccaggccacgcgccgg
gggcgtcgccgggtggcgcgcaccggcgcggcgctcagcaccgacagtcaggcggcggtg
ttcgtgctctccagtgcggagcaggagcagccgaccgtggacttcaccgatatccccgcc
gctccggtcgagccgcgcagccgtccgcgccgccggtccgccgggcgggccgcgggagcg
ccggaacagccgaactga
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