Nocardia wallacei: NWFMUON74_59740
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Entry
NWFMUON74_59740 CDS
T07034
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
nwl
Nocardia wallacei
Pathway
nwl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nwl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NWFMUON74_59740 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nwl03021
]
NWFMUON74_59740 (rho)
03019 Messenger RNA biogenesis [BR:
nwl03019
]
NWFMUON74_59740 (rho)
Transcription machinery [BR:
nwl03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
NWFMUON74_59740 (rho)
Messenger RNA biogenesis [BR:
nwl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NWFMUON74_59740 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
NACHT
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
BCK58202
UniProt:
A0A7G1KSS1
LinkDB
All DBs
Position
complement(6617885..6619885)
Genome browser
AA seq
666 aa
AA seq
DB search
MTDTDLLATPGVETDVRTSDRESDSGQISKMSEQTDVARSGLTGMLLPQLRALAGELGIR
GTSGMRKGDLIAAIKENQSSGSGKAAAPARGRGEKAADAKGEASETPELAVKAEKAESGK
KSESTAKNEPTAKNDPAKNEGGRSARAEQQTLDGVGTDKPTEHNASDSGDDAGRDGGQRG
RGRQRRGREQRAAEASEGKADNKSEAKTEGEAKPEQEAGERRRERNQQSGGQNQNNQNGT
RGGGGGSDDDESGRGRRGRRFRERRRGRDREGGGSETRDVEIREDDVLQPVAGILDVLDN
YAFVRTSGYLAGPNDVYVSMNLVRKNGLRRGDAITGAVRAPREGEAGNQRQKFDPLVRLD
TVNGSDIESAKRRPDFNKLTPLYPNQRLRLETQPNKLTTRVIDLIMPIGKGQRALIVSPP
KAGKTTIMQDIANAIAVNNPEVYLMVVLVDERPEEVTDMQRTVRGEVIASTFDRPPGDHT
SVAELAIERAKRLVEMGQDVVVLLDSITRLGRAYNNASPASGRILSGGIDSTALYPPKRF
LGAARNIENGGSLTIIATAMVETGSTGDTVIFEEFKGTGNAELKLDRKIAERRVFPAVDV
NPSGTRRDDLLMNPDEAAVLHKLRRVLSGLDSHQAIDLLIDRLKKTKNNLEFLMTVSKTA
PGALEE
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
gtgacagatacggacctgctcgcgacacccggggtggagaccgatgtgcgcacctcggac
cgcgaaagtgactccggacagatttcgaagatgagcgaacaaactgacgtcgcacgatcg
gggctgactggaatgttgttgccgcaattgcgtgcgcttgccggagagctcggtatccga
ggtacatccgggatgcgtaaaggcgatctgatcgccgctatcaaggaaaaccaatcttcc
gggtcggggaaggccgctgcccccgcgcgcggccggggcgagaaggccgccgacgcgaag
ggtgaggcgagcgagacgcccgagctcgcggtcaaggcggagaaggcggagtccggcaag
aagtccgagtccaccgccaagaacgagcccaccgccaagaacgaccccgccaagaacgag
ggcggcaggtcggcgcgggccgagcagcagacgctcgacggtgtcggcaccgacaagccg
accgagcacaacgcctccgattcgggcgacgacgcgggccgcgacggtggtcagcgcggc
cgtggccggcagcgccggggccgcgagcagcgcgccgcggaggcatcggaaggcaaggcc
gacaacaagtccgaggccaagaccgagggcgaggcgaagccggagcaggaggccggcgag
cgtcgtcgcgagcgcaaccagcagtcgggcggacagaaccagaacaaccagaacggcacc
cgcggcggcggtggcggcagcgacgacgacgagtccggccggggccggcgcggtcgtcgc
ttccgcgagcggcgccggggtcgcgaccgcgagggcggcggcagcgagacccgcgacgtc
gagatccgcgaggacgacgtcctgcagcccgtggccggcatcctggacgtgctcgacaac
tacgcgttcgtgcgcacctccggctacctggccgggccgaacgacgtgtacgtgtcgatg
aacctggtccgcaagaacggtctgcgccggggtgacgccatcaccggcgccgtgcgcgcg
ccccgcgaaggcgaggccggaaaccagcggcagaagttcgatccgctggtgcgcctggac
accgtcaacggcagcgacatcgaaagcgccaagcgccgcccggacttcaacaagctgacc
ccgctgtacccgaaccagcgcctgcggctggagacccagcccaacaagctgaccacccgg
gtgatcgacctgatcatgccgatcggcaagggtcagcgcgcgctcatcgtgtcgccgccc
aaggccggtaagaccacgatcatgcaggacatcgcgaacgcgatcgcggtcaacaacccc
gaggtctacctcatggtggtgctggtcgacgagcgtccggaagaggtcaccgacatgcag
cgcaccgtgcgcggcgaggtgatcgcctccaccttcgaccgtccgccgggggaccacacc
tcggtcgccgagctggccatcgagcgggccaagcgcctggtggagatggggcaggacgtg
gtcgtgctgctcgactcgatcactcgcctcggccgcgcgtacaacaacgcgtcgccggcg
tcgggccgcatcctctccggtggtatcgactcgaccgcgctgtacccgcccaagcggttc
ctcggcgcggcgcgcaacatcgagaacggcggctcgctgacgatcatcgccaccgcgatg
gtggagaccggttcgaccggtgacacggtgatcttcgaggagttcaagggcaccggcaac
gccgagctgaagctggaccgcaagatcgccgagcggcgcgtgttcccggccgtggacgtc
aacccgtccggtactcgccgcgacgatctgctgatgaatcccgacgaggccgcggtgctg
cacaagctgcgtcgcgtgctgtccgggctggactcgcaccaggccatcgacctgctgatc
gaccggttgaagaagaccaagaacaacctcgagttcctcatgacggtctccaagaccgcc
ccgggcgcgctcgaggagtaa
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