Nocardia wallacei: NWFMUON74_64970
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Entry
NWFMUON74_64970 CDS
T07034
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
nwl
Nocardia wallacei
Pathway
nwl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nwl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NWFMUON74_64970 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nwl03021
]
NWFMUON74_64970 (rpoC)
03400 DNA repair and recombination proteins [BR:
nwl03400
]
NWFMUON74_64970 (rpoC)
Enzymes [BR:
nwl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NWFMUON74_64970 (rpoC)
Transcription machinery [BR:
nwl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NWFMUON74_64970 (rpoC)
DNA repair and recombination proteins [BR:
nwl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NWFMUON74_64970 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
BCK58725
UniProt:
A0A7G1KTY7
LinkDB
All DBs
Position
complement(7126820..7130788)
Genome browser
AA seq
1322 aa
AA seq
DB search
MLDVNFFDELRIGLATAEDIRQWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITTVDEDLRHNELSTLEAEMEVEKKAVADQRDADLEARAQKLEAD
IAELEAEGAKSDVRRKVKDGGEREMRQLRDRAQRELDRLDEIWSTFTKLAPKQLIVDEVL
YRELQDRYGEYFTGAMGAEAIQKLMENFDIEAEAENLRETIRTGKGQKKLRALKRLKVVA
AFQTNGNSPMGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
AQVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPLLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGRPLAMPRLDMVTGLYYLTRQVEGAVGEYR
AATKDEPEFGVYSSPAEAQMAVDRGELTVQSLIKVRLTDQRPPKDVEAELFPEGWQRGDA
WTTKTTLGRVLFNDLLPADYAFIDEIMPKKRQAAIINDLAERYPMIVVAQTVDKLKDAGF
YWATRSGVTVSMSDVLVPPEKADIMERYEQQSDQIEKKYQRGALDHQERNNALVKIWQEA
TEEVGKALRAHYPADNPIITIVDSGATGNFTQTRTLAGMKGLVTNPKGEFIPRPIKSSFR
EGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREEDCGTERGITVRI
AEKMGGVGGAPATLIRDPHVETSTYARTAAVDIVDAKGNVVVEKGHDIGDPAIDALLEAG
VTEVKVRSVLTCTSGTGVCAMCYGRSMATGKLVDVGEAVGIVAAQSIGEPGTQLTMRTFH
QGGVAGDDITGGLPRVQELFEARVPKGKAPIAEVSGRVRLEDDDRFYKITIIPDDGSDEV
LYDKLSKRQRLRVFKHDDGSERLLADNDHVEVGQQLLEGSADPHEVLRVMGPRQVQIHLV
QEVQEVYRSQGVSIHDKHIEVIVRQMLRRVTIIDSGATEFLPGSLVERADFEASNRRVVA
EGGEPASGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINCRSDKLIGLKENVIIG
KLIPAGTGINRYRNIQVQPTEEARAAAYAVPSYDDTYYTPDGFGQSTGAAVPLDDYGFSD
YR
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
gtgctagacgtcaacttcttcgatgaactccggatcggcttggccaccgccgaagacatc
cgccagtggtcctatggcgaggtgaagaagccggagaccatcaactatcgcacgctcaag
ccggagaaggacggcttgttctgcgagaagatcttcggtcccacccgggactgggagtgc
tactgcggcaagtacaagcgcgtgcgcttcaagggcatcatctgtgagcgctgcggcgtc
gaggtgactcgcgccaaggtgcgccgcgagcggatgggccacatcgagctggccgctccc
gtcacccacatctggtacttcaagggtgtgccctcgcgtctgggctacctgctggacctg
gcgccgaaggatctcgagaagatcatctacttcgccgcctacgtgatcaccaccgtcgac
gaggatctgcgccacaacgagctgtccacgctcgaggcggagatggaggtcgagaagaag
gccgtcgccgaccagcgcgacgccgacctggaggcccgcgcccagaagctcgaggccgac
atcgccgagctggaggccgagggcgccaagtccgacgtccgccgcaaggtcaaggacggc
ggcgagcgcgagatgcgtcagcttcgcgaccgggcccagcgcgagctggaccggctcgac
gagatctggagcaccttcaccaagctggctcccaagcagctgatcgtggacgaggtgctc
taccgcgagctgcaggaccgctacggcgagtacttcaccggcgcgatgggtgccgaggcc
atccagaagctgatggagaacttcgacatcgaggccgaggccgagaacctgcgcgagacc
atccggacgggcaaggggcagaagaagcttcgcgccctcaagcgcctgaaggtcgtcgcc
gcgttccagaccaacggcaactcgccgatgggcatggtgctcgacgcggttccggtgatc
ccgccggagctgcggccgatggtgcagctcgacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgcgtcatcaaccgcaacaaccgcctcaagcgactgatcgatctg
ggcgcgcccgagatcatcgtcaacaacgagaagcggatgctgcaggaatcggtcgacgcc
ctgttcgacaatggacgtcggggcagacctgttacgggaccgggcaaccgtccgctgaag
tcgctgtcggatctgctcaagggcaagcagggccggttccgccagaacctgctcggtaag
cgcgtcgactactccggccgttcggtcatcgtggtcggcccccagctgaagctgcaccag
tgcggtctgccgaagctgatggccctcgagctgttcaagccgttcgtgatgaagcgcctg
gtcgacctgaaccacgcgcagaacatcaagtccgccaagcggatggtcgagcggcagcgc
gcccaggtgtgggacgtcctcgaagaggtcatcgccgagcaccccgtgctgctgaaccgc
gcgcccaccctgcaccggctgggtatccaggccttcgagccacttctggtggaaggcaag
gcaatccagctgcacccgctggtgtgtgaggcgttcaacgccgacttcgacggtgaccag
atggccgtgcacctcccgctgtcggcggaggcgcaggccgaggcgcgcatcctgatgctg
tcgtcgaacaacatcctgtccccggcgtccggccgccccctggccatgccgcgtctggac
atggtgaccggcctgtactacctgacccgtcaggtcgagggtgccgtgggcgagtaccgc
gccgccaccaaggacgagccggagttcggcgtgtactcctcgccggccgaggcgcagatg
gcggtggaccgcggcgagctgaccgtgcagtcgctgatcaaggtgcggctgaccgaccag
cgtccgcccaaggacgtcgaggcggagctgttcccggagggctggcagcgcggcgacgcg
tggaccaccaagaccacgctgggccgggtgctgttcaacgatctgctgccggcggactac
gcgttcatcgacgagatcatgccgaagaagcggcaggcggcgatcatcaacgacctcgcc
gagcgctacccgatgatcgtggtcgcgcagaccgtcgacaagctcaaggacgccgggttc
tactgggccacccgttcgggtgtcaccgtctccatgtcggacgtgctcgttccgccggag
aaggccgacatcatggagcgctacgagcagcagtccgaccagatcgagaagaagtatcag
cgcggtgccctcgaccaccaggagcgcaacaacgcgctggtgaagatctggcaggaggcc
accgaagaggtcggtaaggcgctgcgcgcgcactacccggccgacaacccgatcatcacg
atcgtcgattcgggcgccacgggtaacttcacccagactcgtaccctcgcgggcatgaag
ggtctggtgaccaacccgaagggtgagttcatcccgcggccgatcaagtcctccttccgt
gagggcctgacggtgctggagtacttcatcaacacccacggtgcgcgaaagggcctggcc
gacaccgcgcttcgcaccgccgactcgggttacctgacccgtcgtctggtggacgtgtcg
caggacgtcatcgtccgcgaggaggactgcggcaccgagcggggtatcaccgtgcgtatc
gcggagaagatgggcggggtgggtggcgccccagccacgctgatccgtgacccgcacgtg
gagaccagcacctacgcccgtaccgcggccgtcgacatcgtcgacgccaagggcaacgtg
gtggtcgagaagggccacgacatcggcgatccggcgatcgacgcgctgctcgaggcgggc
gtcaccgaggtcaaggtgcggtccgtgctgacctgcacctcgggcaccggtgtctgcgcg
atgtgctacggccgttcgatggcgaccggcaaactcgtggacgtcggtgaagcggtgggt
atcgttgccgcccagtccatcggtgagcccggtacccagctgaccatgcgtaccttccac
cagggtggcgtcgcgggtgacgacatcacgggcggtctgcctcgcgtgcaggagcttttc
gaggctcgggtgccgaagggcaaggcgcccatcgccgaggtgtcgggtcgcgtgcggctc
gaggacgacgaccgcttctacaagatcaccatcattccggacgacggttcggacgaggtg
ctctacgacaagctgtcgaagcgccagcggctgcgggtgttcaagcacgacgacggctcc
gagcgcctgctcgccgacaacgaccacgtcgaggtcggtcagcagctgctggagggttcg
gccgatccgcacgaggtgctgcgcgtgatgggtccgcggcaggtgcagatccacctggtc
caggaggtccaggaggtgtaccggtcgcagggtgtgtccatccacgacaagcacatcgag
gtcatcgtgcggcagatgctgcgccgcgtcacgatcatcgactcgggcgcgacggagttc
ctgcccggctcgctggtcgagcgcgccgacttcgaggcgtcgaaccgtcgcgtggtggcc
gagggcggcgagcccgcctccggtcgcccggtgctgatgggtatcaccaaggcgtcgctg
gccaccgattcgtggctgtcggcggcctccttccaggagacgacgcgtgtcttgacggac
gcggcgatcaactgccgctccgacaagctgatcggcctgaaggagaacgtgatcatcggc
aagctgatcccggccggtaccggcatcaaccgctaccgcaacatccaggttcagccgacc
gaggaggcccgcgcggccgcctacgccgtcccgtcctacgacgacacctactacaccccg
gacggcttcggccagtccacgggcgcagcagtcccgctggacgactacggcttcagcgac
taccgctga
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