Nitrosococcus wardiae: E3U44_04840
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Entry
E3U44_04840 CDS
T05933
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
nwr
Nitrosococcus wardiae
Pathway
nwr00300
Lysine biosynthesis
nwr00470
D-Amino acid metabolism
nwr01100
Metabolic pathways
nwr01110
Biosynthesis of secondary metabolites
nwr01120
Microbial metabolism in diverse environments
nwr01230
Biosynthesis of amino acids
Module
nwr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
nwr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
E3U44_04840 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
E3U44_04840 (dapF)
Enzymes [BR:
nwr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
E3U44_04840 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
QBQ53913
UniProt:
A0A4P7BV86
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Position
997021..997851
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AA seq
276 aa
AA seq
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MRIAFTKMQGLGNDFVVIDTISQPLSLTASQVRRIADRRLGIGCDQVLLVAPPPSPEVDF
GYRIFNADGGEVEQCGNGARCFARFVREQGLTGKERLQVQTAGGVIHLHLETDKQVTVDM
GVPRFAPDEIPFKADHEADYYLLEFDKQRVEIGAVSMGNPHCVLRVPEIDTAPIAYWGPI
LERHPRFPQRVNVGFVQVISPGHIRLRVYERGAGETPACGTGACAAMVIGRRRGWLSGQV
YVDLPGGRLGIHWAGEGQSVWMTGPAETVFEGTIEL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcgaattgcctttaccaagatgcagggtctgggcaatgattttgtggtgattgacacc
atttcccagccattatctttaactgcttcccaggtacgtcggattgccgatcgccgccta
ggcataggctgtgaccaagtgctgttggtagcgccgcctccctctccggaggttgatttt
ggttatcggatttttaacgctgatgggggagaagtggaacagtgtggtaacggtgcccgc
tgctttgcccgcttcgttcgggaacaaggccttaccggtaaagaaaggttgcaagtccag
accgctggtggcgttattcatttgcacctagagactgataagcaggtcaccgtggatatg
ggggtgccccgttttgcccccgatgagatcccgtttaaagcagaccatgaggcagactat
tacctgttggaattcgataaacagcgcgtagaaattggagccgtatccatgggcaatccc
cactgcgtgctgcgcgtgccagagattgatactgcccctatagcctactggggacctata
ctggaaaggcacccccgctttccccagcgggttaatgtgggttttgtccaagtcatctcc
cctggccatatccgtctgcgggtctatgagcgaggtgcaggagaaacccccgcttgtgga
actggggcctgtgcggcaatggtgataggccgacggcggggctggctgagtgggcaagtt
tatgtggacctgcccggtgggcgtttaggtattcactgggcgggtgagggtcaatctgtt
tggatgacagggccggcagaaaccgtgttcgaggggactatcgagctatga
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