KEGG   Nitrosococcus wardiae: E3U44_04840
Entry
E3U44_04840       CDS       T05933                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
nwr  Nitrosococcus wardiae
Pathway
nwr00300  Lysine biosynthesis
nwr00470  D-Amino acid metabolism
nwr01100  Metabolic pathways
nwr01110  Biosynthesis of secondary metabolites
nwr01120  Microbial metabolism in diverse environments
nwr01230  Biosynthesis of amino acids
Module
nwr_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:nwr00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    E3U44_04840 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    E3U44_04840 (dapF)
Enzymes [BR:nwr01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     E3U44_04840 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF Pro_racemase
Other DBs
NCBI-ProteinID: QBQ53913
UniProt: A0A4P7BV86
LinkDB
Position
997021..997851
AA seq 276 aa
MRIAFTKMQGLGNDFVVIDTISQPLSLTASQVRRIADRRLGIGCDQVLLVAPPPSPEVDF
GYRIFNADGGEVEQCGNGARCFARFVREQGLTGKERLQVQTAGGVIHLHLETDKQVTVDM
GVPRFAPDEIPFKADHEADYYLLEFDKQRVEIGAVSMGNPHCVLRVPEIDTAPIAYWGPI
LERHPRFPQRVNVGFVQVISPGHIRLRVYERGAGETPACGTGACAAMVIGRRRGWLSGQV
YVDLPGGRLGIHWAGEGQSVWMTGPAETVFEGTIEL
NT seq 831 nt   +upstreamnt  +downstreamnt
atgcgaattgcctttaccaagatgcagggtctgggcaatgattttgtggtgattgacacc
atttcccagccattatctttaactgcttcccaggtacgtcggattgccgatcgccgccta
ggcataggctgtgaccaagtgctgttggtagcgccgcctccctctccggaggttgatttt
ggttatcggatttttaacgctgatgggggagaagtggaacagtgtggtaacggtgcccgc
tgctttgcccgcttcgttcgggaacaaggccttaccggtaaagaaaggttgcaagtccag
accgctggtggcgttattcatttgcacctagagactgataagcaggtcaccgtggatatg
ggggtgccccgttttgcccccgatgagatcccgtttaaagcagaccatgaggcagactat
tacctgttggaattcgataaacagcgcgtagaaattggagccgtatccatgggcaatccc
cactgcgtgctgcgcgtgccagagattgatactgcccctatagcctactggggacctata
ctggaaaggcacccccgctttccccagcgggttaatgtgggttttgtccaagtcatctcc
cctggccatatccgtctgcgggtctatgagcgaggtgcaggagaaacccccgcttgtgga
actggggcctgtgcggcaatggtgataggccgacggcggggctggctgagtgggcaagtt
tatgtggacctgcccggtgggcgtttaggtattcactgggcgggtgagggtcaatctgtt
tggatgacagggccggcagaaaccgtgttcgaggggactatcgagctatga

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