Nitrosococcus wardiae: E3U44_05280
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Entry
E3U44_05280 CDS
T05933
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
nwr
Nitrosococcus wardiae
Pathway
nwr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nwr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E3U44_05280 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nwr03400
]
E3U44_05280 (ruvB)
Enzymes [BR:
nwr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E3U44_05280 (ruvB)
DNA repair and recombination proteins [BR:
nwr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E3U44_05280 (ruvB)
RecFOR pathway proteins
E3U44_05280 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_3
Mg_chelatase
AAA_14
AAA_22
AAA_16
Rad17
nSTAND3
TIP49
AAA_18
NTPase_1
DUF815
AAA_2
RNA_helicase
Bac_DnaA
AAA_24
AAA_28
NB-ARC
TsaE
AAA_17
ABC_tran
AAA_33
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
QBQ53990
UniProt:
A0A4P7BXY1
LinkDB
All DBs
Position
1084751..1085797
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AA seq
348 aa
AA seq
DB search
MTLSRGLVSPQGASDEAVIEPSLRPAKLTDYVGQPQVQEQMKIFIPAARARGEALDHVLI
FGPPGLGKTTLSHIIANELGVNLRQTSGPVLERPGDLAALLTNLEPRDVLFIDEIHRLSP
VVEEVLYPAMEDRQIDIMIGEGPAARSIKLDLVPFTLVGATTRAGLLTSPLRDRFGIVQR
LEFYEVEHLVLIVERTARILGMVMEAEGALEVARRSRGTPRIANRLLRRVRDYAEVKGDG
RVTHEVAKKALDLLAVDSNGFDTMDRKLLLAMIEKFDGGPVGVDSLAAAISEERGTIEDV
IEPFLIQQGFIVRTPRGRMATRHTYLHFGLKPTAEAVQQETPDLFFNE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgactctaagccggggcttggtttccccccaaggggctagcgatgaagcagtcatcgaa
ccttccctgcgccctgccaagctgaccgattatgtgggacaacctcaagtgcaggagcag
atgaaaatttttattcctgctgcccgggctcggggagaggcccttgaccatgtgctcatt
tttgggcctccagggctgggtaagaccaccctttcccacatcattgccaatgaattgggg
gtcaatctgcgccaaacctctgggccggtattggagcgtcctggcgacttggccgccctg
ctgaccaatctagagccacgagatgtgctttttatcgatgaaattcatcgcttgagcccc
gtggtggaagaggtgctctatccggccatggaagatcgccagatcgatatcatgataggc
gaaggtccggcggcacgttccattaaattggatttggtgccctttactttggtgggggcc
accacccgggctggattgctgacctctcctttacgggatcgctttggtatcgtccagcgc
ctggaattctatgaggtcgaacatttggtcttgattgtagaacgtacggcccgtattctt
ggcatggtaatggaagcggaaggggcgttggaggtagcccgccgctctcgggggacaccg
cggattgccaatcgcctgctgcggcgggtgcgggattacgccgaggttaagggggacggc
cgggtcacccatgaggtggcgaaaaaagccttagatttgctagctgtggatagtaatggt
tttgataccatggaccgtaagctgctgctagcgatgatcgagaaatttgatggtgggccg
gtgggtgtcgatagtttggccgctgctattagtgaagagcggggcactatcgaagatgtg
atagagccatttttgatccaacaaggatttattgtgcgcacgccgcgaggccgaatggcg
acccgtcatacctaccttcattttggtttgaagccgacggcagaagcggtacagcaagaa
accccagatcttttttttaatgaatga
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