Nitrosococcus wardiae: E3U44_08930
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Entry
E3U44_08930 CDS
T05933
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
nwr
Nitrosococcus wardiae
Pathway
nwr02020
Two-component system
nwr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
nwr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
E3U44_08930
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
E3U44_08930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nwr03000
]
E3U44_08930
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
nwr02035
]
E3U44_08930
Transcription factors [BR:
nwr03000
]
Prokaryotic type
Helix-turn-helix
Other families
E3U44_08930
Bacterial motility proteins [BR:
nwr02035
]
Flagellar system
Flagellar assembly proteins
Others
E3U44_08930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
FleQ
AAA_5
AAA_16
HTH_50
nSTAND3
bpMoxR
AAA_7
AAA
ATPase
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QBQ54619
UniProt:
A0A4P7BZB8
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All DBs
Position
1843466..1844911
Genome browser
AA seq
481 aa
AA seq
DB search
MATVPCLLILEGDKERGQALQTIIEFIGYRSVLIEPSREWRKQVDDLDLQAVVAVLLGRC
DEDQVQPAALVKELASEQRQLPVWILVPKERSQEKESWRLPGSLGILRYPFTQAELTGAL
QNAELFRQGRRQKKEGGRPVELFRSLVGNSRAIRMVRHLIEQVADSNATVLILGESGTGK
EVVARNLHYYSARRGKPFVPVNCGAIPGELLESELFGHEKGAFTGAITSRQGRFELAQGG
TLFLDEIGDMPMAMQVKLLRVLQERTFERVGSSKLISVDVRVIAATHRDLEEQLTEGNFR
QDLYYRLNVFPIEMPPLRARVEDIPLLINELITRIGHEKGGAVRLTPAAVMALCQYPWPG
NVRELANLIERLMILHPYGVVDYHDLPQKYQIDEGKNHPFVPEVSSLEQVVDTSETPRLP
REGLDLKKHLNRIECSLIKQALDEADGVVAQAANRLRMRRTTLVEKLRKYGIQREDMTSR
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
ttggctaccgttccgtgcttattgatcttggagggtgataaagaacgcggccaggccctc
caaacgattatcgagtttattggctaccgttccgtgcttattgagccaagccgggaatgg
cgaaaacaggtggatgacctcgatctccaagccgtggttgccgtgttgctgggtcgttgc
gacgaagatcaggtgcagccggctgccctagtgaaggaattggcgagtgagcaaaggcaa
ttgccggtatggatattggtgcctaaggagcgcagtcaagagaaagaaagttggcgtttg
ccaggctctctagggattctccgttacccttttacccaagcagagttgacaggtgctttg
caaaatgcagaactttttcgccaaggccggcgacaaaaaaaagaagggggacgccctgta
gagctgtttcggagcttagtgggcaacagccgcgctattcgaatggtccgccatttgata
gaacaggttgctgattctaatgcaacggtactgatcctgggggaatcggggactggcaag
gaagtggttgcccggaatctccactactattccgcacgtcggggaaagccgtttgtgccc
gtcaattgtggcgctattcctggtgaactgctggaaagtgaactctttggccatgagaag
ggggcttttacgggagctattacctctcgccaagggcggtttgagctagcccaaggaggg
accctgtttctggacgaaatcggcgatatgcctatggccatgcaggtgaaattattgcgg
gtattgcaggaacggacttttgagcgggtgggaagcagtaagcttatcagtgtggatgtg
cgtgttatcgcggccacccaccgtgacctggaagaacaactcacagaaggaaattttcgc
caggacctttattaccgccttaatgtttttccgattgagatgccgcctttgcgggcccgg
gttgaagatatccccctgctcattaatgaactgattacccggattgggcacgaaaaggga
ggcgctgtccgcttgacgccggcggcggtgatggccctctgccagtatccctggccggga
aatgtacgagaactggccaacctgattgagcgtttaatgatactccatccctatggtgtt
gtggattatcatgatttgccccagaagtaccaaatagatgagggcaaaaaccaccctttt
gtcccagaggtgtcatcattagagcaggtcgtcgatacttcggagactccccggttgccg
cgagaaggtttggacctcaaaaagcacctcaatcgcatcgaatgttcactcatcaaacaa
gcgctggacgaggcagatggggtcgtggctcaagccgccaatcgactgcgaatgcggcgt
accactttagtcgaaaaactgcgcaaatacggtatccagcgcgaagatatgacgtcaaga
ttttga
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