KEGG   Nitrosococcus wardiae: E3U44_08935
Entry
E3U44_08935       CDS       T05933                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K10943  two-component system, response regulator FlrC
Organism
nwr  Nitrosococcus wardiae
Pathway
nwr02020  Two-component system
nwr02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:nwr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    E3U44_08935
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    E3U44_08935
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:nwr02022]
    E3U44_08935
   02035 Bacterial motility proteins [BR:nwr02035]
    E3U44_08935
Two-component system [BR:nwr02022]
 Other families
  FlrB-FlrC (polar flagellar synthesis)
   E3U44_08935
Bacterial motility proteins [BR:nwr02035]
 Flagellar system
  Flagellar assembly proteins
   Others
    E3U44_08935
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 HTH_8 AAA_5 HTH_30 AAA_2 AAA_19 Mg_chelatase AAA AAA_16 AAA_3 HTH_28 HTH_29 MCM HTH_24 HTH_20 HTH_23 Sigma70_r4_2 HTH_11 AbiEi_4 MerR nSTAND3 DUF2089 HTH_50 PaaX Myosin_head TIP49 CggR_N AAA_18 NB-ARC
Other DBs
NCBI-ProteinID: QBQ54620
UniProt: A0A4P7BZH7
LinkDB
Position
1845119..1846150
AA seq 343 aa
MVQPSVLVVKNEPALRVLEKDESLVAIDPRFRAVVELARRVARSEATVLISGESGTGKEV
LAHYIHRHSKCCEGPFVAINCAAIPENMLEATLFGYEKGAFTGAHQTHPGKFEQAQGGTL
LLDEISEMDLDLQAKLLRVLQEREVERLGGCKVIPLDVRVLATTNRALREQIASGQFRED
LYYRLNVFPLQLPPLRERTKDILPLARQLIASRAAAAGRLPPRLTLAAEAKLLAHPWPGN
IRELDNVVQRALILEEGEAISTQALAFETGIEAPLPTGVGELSKDLKSHEKQLILDTLVR
CGGRRKQAAAQLGISERTLRYKLARLRKAGVAIPAPSNTRLTP
NT seq 1032 nt   +upstreamnt  +downstreamnt
atggtgcaaccctcggttctggtcgttaaaaatgaaccagctctgcgggtgttggaaaaa
gatgaatctctggtagccattgatccccgtttccgggcggtagtggaactagcgcggcgg
gtagctcgcagcgaggctacggtgcttattagtggtgagagtggcacggggaaggaggtt
ttagcacactatatccaccgccactcaaagtgctgcgaaggcccttttgtggccatcaac
tgcgctgccattcctgagaatatgctggaggccaccctgtttggctatgaaaaaggggct
tttactggtgcccaccagactcatcccggcaaattcgagcaggcccagggaggaactttg
ttgctggatgaaatctcggaaatggatttggatttacaggctaagttgctccgcgtatta
caagagcgggaagtagagcgcttaggcggatgcaaagtgatccccttggatgtgcgggta
ttggcaaccaccaatcgtgctctccgggagcagatagcgagtggccagtttcgcgaagac
ctttattaccgcttaaatgtttttcctttgcagctgccgcccctgcgggagcgcaccaaa
gatattttacccctagcgcgacaactgatcgccagccgggccgcagcagcgggtcgtctc
ccaccccgtttgacgctcgctgccgaagccaagctgctggcccatccctggccaggaaat
attcgtgaactggataatgttgttcagcgggccttgattctggaagagggagaagcgata
agcacccaggcgctggcctttgaaacggggatagaagcgccgcttccaacgggggtagga
gagcttagcaaggatctcaaaagccatgaaaaacaactcattctagatacgctggtgcgc
tgtggtgggcggcggaaacaggccgccgcccagttaggcattagcgagcgaaccctgcgt
tataaacttgctcggctaagaaaggctggtgtggctattcctgccccctcgaatacaaga
ttgacaccctga

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