Nitrosococcus wardiae: E3U44_10330
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Entry
E3U44_10330 CDS
T05933
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
nwr
Nitrosococcus wardiae
Brite
KEGG Orthology (KO) [BR:
nwr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nwr03021
]
E3U44_10330 (rpoS)
Transcription machinery [BR:
nwr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
E3U44_10330 (rpoS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
QBQ54865
UniProt:
A0A4V1AVZ6
LinkDB
All DBs
Position
complement(2136771..2137703)
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AA seq
310 aa
AA seq
DB search
MSTSKSETLLLEPAPQQLPIDPEDVQESSSFNDQELDATRLYLSEIGFAPLLTAEEEVYH
ARLAQRGDSAGRKRMIESNLRLVVKIARRYMNRGLALLDLIEEGNLGLIHAVEKFDPEMG
FRFSTYATWWIRQTIERALMNQTRTVRLPVHVVKEIKSYQRVASKLAQELEHDPTFEELA
QQLDKSVEEIKRMWSLKDNIASMDTGYRSDQEKTLLDTLPDEGTPDPTTLLQNDDMQSRL
ELWLSQLNDKQREVVVRRFGLQGYESQTLEQVGQAIGVTRERVRQIQLEALKRLRRIMAK
EGISVEVLFK
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
ttgtctacaagcaaatccgagacattattgctggagcctgcaccccagcagttacccatc
gatcctgaagacgtgcaggaaagctcatccttcaacgatcaagagcttgatgctacacgc
ctctatttaagtgaaattggcttcgcacctttgctgacagcagaagaagaagtctaccat
gcgcgccttgctcaaagaggagattccgctgggcgtaagcgcatgattgagagcaatctg
cgacttgtcgttaagattgcaaggcgctacatgaaccgaggattagcactccttgattta
atcgaagaaggcaacttaggcttaattcacgcggtcgagaaatttgatccagagatgggc
tttcgcttctctacttatgccacttggtggatacggcaaactattgaacgggcgctcatg
aatcaaacccgcaccgtgcgtttgcccgtccatgtagtaaaggaaatcaagagttatcag
cgggtagccagtaaactcgcgcaagaattagagcatgatccgaccttcgaagagctagcc
cagcaattagataagtccgtcgaagaaattaagcgcatgtggagccttaaagacaatatt
gcttcgatggatacaggttaccgaagtgaccaagaaaagaccttgctcgataccttaccc
gatgagggaacacctgacccgaccactttactgcaaaatgacgatatgcagtcccgcctt
gaattatggttgagccaactcaatgacaaacagcgagaagtcgttgttcgacgctttggt
ctccaaggttacgagtcacaaaccttggaacaggtgggtcaagccattggcgtgactcga
gagcgggttcgccagattcagctcgaagccctcaaacgactgcgccgtatcatggctaaa
gaagggatttcagtcgaggtcttattcaaataa
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