Nitrosococcus wardiae: E3U44_10485
Help
Entry
E3U44_10485 CDS
T05933
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
nwr
Nitrosococcus wardiae
Pathway
nwr03030
DNA replication
nwr03430
Mismatch repair
nwr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nwr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E3U44_10485 (dnaE)
03430 Mismatch repair
E3U44_10485 (dnaE)
03440 Homologous recombination
E3U44_10485 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nwr03032
]
E3U44_10485 (dnaE)
03400 DNA repair and recombination proteins [BR:
nwr03400
]
E3U44_10485 (dnaE)
Enzymes [BR:
nwr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E3U44_10485 (dnaE)
DNA replication proteins [BR:
nwr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E3U44_10485 (dnaE)
DNA repair and recombination proteins [BR:
nwr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E3U44_10485 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
HROB
SSB
Motif
Other DBs
NCBI-ProteinID:
QBQ54894
UniProt:
A0A4P7C0I1
LinkDB
All DBs
Position
2161070..2164546
Genome browser
AA seq
1158 aa
AA seq
DB search
MDLSFVHLRLHTEYSMVDGLVRIRPLVQAAREAGMPAVAVTDQNNVFAMVKFYRAAQAEG
VKPVIGADVFLVDSVESSRASRFTLLCQNKKGYCNLSRLLSRAYSEGQYYGIPRLQWNWL
QGQSDGLIVLSGGREGDVGQALLTGNEAQAKRLLERWQALFPGRYYLELHRTGREGEEDY
LHGAVALALACDTPVVATNDVRFLRSQDFEAHEARVCIHEGRTLDDPRRPRCYSEQQYLR
TSSEMAELFADLPEALENTIEIARRCNLELTLGTHYLPNFPVPEGLSIETFLEVEACRGL
EQRLAKLYPFETEREIKRPTYEARLAEELAVINQMGFPGYFLIVADFIRWAKKNGIPVGP
GRGSGAGSLVAYALQITDLDPLAFDLLFERFLNPERVSLPDFDIDFCMERRDRVIDYVSH
YYGRDHVSQIITYGSMAAKAVVRDVGRVLGHPYGFVDQIAKLIPFDLKMTLDKALEESEG
LRARYDEEEEVRFLIDLARKLEGLTRNAGKHAGGVVIAPKKLTDYVPYYCEQGASGVVTQ
FDKDDIEAIGLVKFDFLGLRTLTIIDWALQAINQQRAQQGAAPLDLALLPKDDRESYILL
KRCATTAVFQLESRGMKDLIKRLQPDCFEDIIALVALFRPGPLQSGMVDDYINRKHGRAK
VDYPHPALEPILKPTYGVIVYQEQVMQIAQVLAGYTLGGADLLRRAMGKKKPEEMAKQRA
IFTEGAKAQGVEGARATAIFDLMEKFAEYGFNKSHSAAYALIAYQTAYLKAHYPAPYMAA
VLSSDMDNTEKVAAFIQECQVMNLEVLPPDVNVSDYRFSAQGENAIRYGLGAIKGVGASA
LEGIIKEREQHGPYQDLFKFCRRIDLRKINRRVLEALNRSGALDPLGANRATLEVSLETA
LALAEQHSRNTSLGQNDLFGLDCVLEDGQAGNYTETQEWDEEQRLALEKETLGLYLSGHP
IDRYEQELRQIAPRRLAELIGQANNHQNYNQRVVIAGLIGSLRTNKARQGGRNAFVTLDD
RSARLEVKVFAEVFNNYQELLQPDHIVVIKGTLGWDSYADTATVTAEKVYSIAEARGAFA
KTLEIGFDGTCVGQEVIAELAKILAPFRQGRCPVAICYRNGVASARLMLGEEWQIQPNEA
LLARLRLLPGAEHVQVIY
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atggacttatccttcgttcatcttcgtttgcataccgaatactctatggtggacggcctg
gtgcgtatccgacccctggttcaagctgcccgagaagcgggtatgccagcggtagcagtg
actgaccagaataatgtatttgctatggtcaagttctaccgcgctgctcaggcagaggga
gtgaagcctgttattggggctgacgtttttttagtggattcagttgaaagtagccgagcg
agccgctttaccttgctttgtcagaataagaagggttactgcaatctatcccgcctgtta
tcgcgtgcctatagcgaaggtcaatattatggcattccccgcttacaatggaactggctg
caaggccagagcgatggtctgattgtcctttctggtggtcgggaaggtgatgtgggccaa
gcccttttgactggcaacgaggctcaagccaagcgactattggaacgttggcaagctctt
ttcccgggccgatattatttggagctgcatcgcactggcagagagggggaagaagattat
ctccatggggccgtagcacttgctttagcgtgtgataccccggtggtggcaaccaatgat
gttcggtttcttagatcccaggatttcgaagctcacgaggctcgggtctgtattcatgaa
gggcggactttagatgatcctcgtcggccccgttgctatagtgagcagcaatatttgcga
acctcgtcggaaatggcggaattatttgcggacttgccggaagccctggaaaatacgata
gaaatcgctcggcgttgtaatctcgaacttactctggggacccactaccttccaaatttt
ccggtgccagaggggctgagcatcgaaacgtttcttgaggtcgaagcctgtcgagggctg
gagcaacggctagcaaaactttatccttttgaaacggaaagggaaatcaagcgacccact
tacgaagcgcggctcgctgaggaactggcggtgattaaccagatggggtttccagggtat
ttcctcattgtcgctgattttattcgctgggctaaaaaaaatggaattccggtagggcca
ggacggggctcaggggcaggatccctggttgcctatgctctgcaaataaccgacctggat
ccgttagcctttgatcttctctttgaacgttttttgaaccctgagcgtgtttccctgccc
gattttgatatcgatttctgtatggaacgccgcgaccgggtgatcgattatgtgagccac
tattacggtcgggatcatgtttcccagattattacctacggtagcatggccgccaaagcg
gtagtgcgggatgtgggccgggtgttagggcatccttacggttttgtggaccaaattgcc
aagcttatccctttcgatcttaagatgactctggacaaggccctagaggagtccgaaggg
ttacgggcccgttacgatgaagaagaggaagttcgatttcttattgacctggctagaaag
cttgaggggctaacacgaaatgccggtaaacatgctggcggtgtcgtgattgcaccgaag
aaattgactgactatgttccttactactgcgagcagggagcgagcggagtcgtcacccaa
tttgacaaggacgacatagaagctattggcttagtcaaattcgatttcctgggcctgcgt
accctgaccattatcgactgggctttgcaggctatcaatcaacagcgagctcagcaaggc
gcggccccgctcgatttggcccttttaccaaaggatgatcgggaaagctacatacttctt
aagcgttgtgcgactaccgccgtgtttcaattggaatcccgcggtatgaaagacctcata
aagcggctccagccagattgctttgaagacattatcgccttggtggccttgttccgacct
ggacctcttcagtcagggatggtagatgattatatcaatcggaaacatggtcgtgccaag
gtggactatccccaccctgcccttgaacccatcctcaaaccgacctacggtgttattgtt
taccaggaacaggtgatgcaaattgcccaggttttggcggggtatactttggggggggct
gatctgctgcgccgagccatgggtaagaaaaagcccgaggagatggccaagcagcgcgct
atctttacggaaggagcaaaagcacaaggggttgaaggcgcgcgggcaacggccatcttc
gacctcatggagaaatttgccgagtacgggttcaacaaatcccattccgcagcctatgcc
ttaatcgcttatcaaaccgcttatcttaaggcccattatcccgctccctatatggcggca
gtgctttcttccgatatggacaatacggagaaagtagcggcttttattcaggaatgccag
gtcatgaatttggaggtgcttcctcctgatgtgaatgttagcgattatcgtttttcggcc
cagggcgagaacgctattcggtacggtttgggtgcgattaaaggcgtcggtgcctcagcc
ctggaggggatcatcaaggagcgagaacagcacggaccttaccaggatctttttaaattc
tgtcgccgtattgatttgcgcaaaattaaccggcgagtattagaagccttgaaccgctcg
ggggctttggatcctttgggggctaatcgagcgactctagaagtttctttggaaactgct
ttggctttggcggaacaacattcccgtaatacttctctagggcagaatgatttattcggc
cttgactgcgtgttggaggacggccaagcaggaaattataccgaaacccaggagtgggat
gaggaacagcggttggcattagaaaaggagaccttagggttgtatcttagcggtcatcct
attgaccgttatgagcaggaactgaggcagatagctccccgccgcctagccgagcttatt
ggccaggcgaataatcaccaaaattataaccagcgggttgtcatcgccggtttgataggc
tccttgcgcaccaataaagcccgtcagggaggacgtaatgccttcgtgactttggatgac
cggagtgcccgtcttgaggtgaaggtgtttgccgaagtttttaacaactaccaggaactg
ttgcagccggatcatatcgtcgtgattaaagggactttagggtgggattcttatgccgac
actgccaccgttacggcggaaaaggtctacagtattgctgaggcccgtggggctttcgcg
aaaaccttagagatcggatttgacggtacttgtgtcgggcaggaagtcattgctgaatta
gcgaagattttggcgcctttccggcaaggccgttgtcctgttgctatttgctaccgcaat
ggggttgccagtgcccgactgatgttgggtgaggagtggcaaattcaacccaatgaggca
ctacttgcccgtttgcgattactgccgggggcggaacatgtgcaggtcatatattaa
DBGET
integrated database retrieval system
