KEGG   Nitrosococcus wardiae: E3U44_11640
Entry
E3U44_11640       CDS       T05933                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
nwr  Nitrosococcus wardiae
Pathway
nwr00010  Glycolysis / Gluconeogenesis
nwr00020  Citrate cycle (TCA cycle)
nwr00260  Glycine, serine and threonine metabolism
nwr00280  Valine, leucine and isoleucine degradation
nwr00310  Lysine degradation
nwr00380  Tryptophan metabolism
nwr00620  Pyruvate metabolism
nwr00630  Glyoxylate and dicarboxylate metabolism
nwr00640  Propanoate metabolism
nwr00670  One carbon pool by folate
nwr00785  Lipoic acid metabolism
nwr01100  Metabolic pathways
nwr01110  Biosynthesis of secondary metabolites
nwr01120  Microbial metabolism in diverse environments
nwr01200  Carbon metabolism
nwr01210  2-Oxocarboxylic acid metabolism
nwr01240  Biosynthesis of cofactors
Module
nwr_M00009  Citrate cycle (TCA cycle, Krebs cycle)
nwr_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
nwr_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
nwr_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:nwr00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    E3U44_11640 (lpdA)
   00020 Citrate cycle (TCA cycle)
    E3U44_11640 (lpdA)
   00620 Pyruvate metabolism
    E3U44_11640 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    E3U44_11640 (lpdA)
   00640 Propanoate metabolism
    E3U44_11640 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    E3U44_11640 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    E3U44_11640 (lpdA)
   00310 Lysine degradation
    E3U44_11640 (lpdA)
   00380 Tryptophan metabolism
    E3U44_11640 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    E3U44_11640 (lpdA)
   00670 One carbon pool by folate
    E3U44_11640 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nwr04147]
    E3U44_11640 (lpdA)
Enzymes [BR:nwr01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     E3U44_11640 (lpdA)
Exosome [BR:nwr04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   E3U44_11640 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 GIDA FAD_oxidored NAD_binding_8 AlaDh_PNT_C FAD_binding_3 3HCDH_N HI0933_like UDPG_MGDP_dh_N FAD_binding_2 DUF478 DUF2501
Other DBs
NCBI-ProteinID: QBQ55090
UniProt: A0A4P7C0M9
LinkDB
Position
2408610..2410028
AA seq 472 aa
MANEVGSTQLAIIGGGPGGYAAGFLAADLGLETTLIDTEPNPGGVCLYRGCIPSKALLHV
AEVISEAREASAWGVSFSDPEIDLDKLRAWKEQVVGKLTGGLGQLSRQRKINYIQGQAGF
MDARTLRIKKQQGEARLRFQNAILATGSYPASLPHLSLDSSRLLDSTSALEIQDVPKSLL
VIGAGYIGLEMATVYGSLGSQVTVVEMTEGLLPGADRDLASILAKRMDGILHGLLLKTKV
AHMEEAAEGIRVRFEGAEEGEQTFEKVLVAVGRKPNSAIPGLEHTQVELDEKGFIQVDSQ
RRTADPAIFAIGDVVGEPMLAHKASHEGRVAAEVIAGRRVLFEPQAIPAVVFTNPEVAWC
GLTETEATREGRSIQVARFPWAASGRAVTLHRIDGLTKLIIDPETERVLGAGIVGPGAGE
LIAELVLAVEMAAVASDIKLSIHPHPTLSETVMEAAEVFFGQSTHLYRPAKK
NT seq 1419 nt   +upstreamnt  +downstreamnt
atggctaatgaagtgggatcaacgcagttagccattattgggggaggacccggtggctac
gcggcaggctttctcgctgccgatctaggcttggaaactactctgattgacacggaacct
aaccctgggggggtttgcctctaccgggggtgtattccgtccaaggctttattacatgtg
gctgaggtgattagtgaggctagggaggcgagtgcttggggagtaagcttttctgatccg
gagattgatttggataagctgagagcctggaaagaacaggtagtgggcaagcttacgggg
gggctggggcagctgtcccgacaacggaaaatcaattatattcaagggcaagccggattt
atggatgcccgaaccctgcggattaagaaacagcagggcgaagctcgattgcggtttcaa
aatgctatcttggcgaccggttcctatcctgcttccctgcctcatctttccttggacagc
tcccgtttactggattccacctcagcgttggaaattcaggacgttcccaaaagtttactg
gtgattggtgccggctacatcggcttggaaatggcgaccgtctatgggagcctaggatcc
caggtcaccgtggttgaaatgaccgaaggtttattgcctggagcggatagggatttagcc
tcgatactggccaagcgcatggacgggattctccatggtctcctgcttaagaccaaagtc
gcccatatggaagaagcggccgagggcatccgggtccgttttgagggggctgaggagggg
gagcagaccttcgaaaaagtgctggtggcagtgggacgcaagcccaattcagctatccct
ggattagagcatacccaggtggaacttgatgaaaagggttttatccaagtggattcccaa
cgtcgaaccgctgatcctgccatttttgccattggggatgtggtgggagaacctatgttg
gctcacaaggctagtcatgaggggcgagtcgccgctgaagtcattgccgggcgccgggtt
ttattcgaaccccaagccattcccgcagtcgtgtttaccaatccggaagtggcctggtgt
ggtctgacggaaaccgaggctacgcgggaaggccgctccatccaggttgctcgctttccc
tgggcagcctccggtcgggcagtcaccttacatcgcatcgatggccttaccaagcttatt
atcgatccagagacggaacgggttctgggggcagggattgtggggccaggcgcgggagag
cttattgctgagttggttctcgctgtggagatggcggccgtggcctcggatattaagctt
agcattcatccccatccgactctttcagagacagtaatggaagcagcggaagtctttttt
ggccaaagcactcacctttatcgtcctgctaagaagtag

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