Nitrosococcus wardiae: E3U44_12245
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Entry
E3U44_12245 CDS
T05933
Name
(GenBank) efflux RND transporter permease subunit
Organism
nwr
Nitrosococcus wardiae
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Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
QBQ55193
UniProt:
A0A4P7BYE1
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Position
2550764..2553886
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AA seq
1040 aa
AA seq
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MITKIIQWSLKQRLLILLGAAALLVWGGVETGRMPVDVFPDLTAPRVTVVAEAHGMAPEE
VETLITFPLETAFNGASGVRRVRSSSGVGIAVITIEFNWGMDIYRARQIVAEKLQLVRGA
LPPQIPPPMLAPVTSIMGEIMFIALTSDRHSALELKTKADWVLRRRLLAVPGVAQVIPIG
GDTKQYQVIIQPERLAAYDIAVDQVVEALRKTNQNISAGFYVQGGQEYLIHGIGRVQRLE
DIRETLITQRGDQPVLVRHVAEVALGPAPKRGTGAHNGESAVIIGIQKQPDTNTLALTAR
LDQVLVDIQTALPPGMTLKTHIFRQADFITVAIENLLEALRDGAILVVVIVFAFLMSLRA
SVITLLAIPLSLVTAVLTMKALGANFNTMTLGGMAIALGALVDDAIIVVENIVRRLRENQ
LREKEQRRSLGRVVLSATREIQGSIVFATLIIILVFLPLFFLSGVEGRLMQPLGLAYIIS
LTASLLVAITVTPVLSLLLLPRARIVQANQETRLVGYLKRHYERFLTATVTRWKTIALVA
LIALTATLGALAGVGQSFLPPFNEGSLTISALTLPGTSLAQSNRLGQRVEEILLQHPEVV
ATARRTGRAELDPHAQAIYASEIDVSLRGGERSKETFLADLRADLAAISGMQINIGQPIS
HRIDHMLSGTRANIAVKIFGPDLYELRRMGQQVRTVMEGIPGVVDLTTEQQADIPFLTIK
FKRQAIARHGLQVQEVAEAVTTAFYGQSVSKILEGQSSFDLVVRYDPRVKADLEAVRAAL
ITTPGGARLPLHALAEIRKDRGPNTISRENVQRKMVVMANVAERDLVGVVEEIQQEVQQR
VPLPAGYHIEYGGQFESAETASRTLSILGVLVVLSIFLLLFMAFHSARDASLVMVNLPLA
LMGGVIGVYLSGGILSVASLIGFITLFGIATRNGVMMIAHIHHLVEKEGVREPLTAVIRG
AKERLIPILMTALGTALALIPLALSAGEPGSEIQAPMAMVILFGLLTSTMLNMVVVPALY
LRFGAVRSRFYADHCGVLPE
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccaaaatcatccaatggtccctgaagcaacgcttgttgattcttcttggcgct
gcagcccttttggtgtggggcggcgtggagaccgggcggatgccggtggatgtgtttccc
gatctgaccgcgcctagggtgacggtggtggctgaggcccatggcatggccccggaggag
gtggaaaccctgatcacttttcccttggaaacggcctttaatggagctagcggcgtgcgg
cgggtgcgctcctccagcggtgtggggattgcggtgatcacgatcgaatttaactggggg
atggatatttatcgggcgcggcagatcgtggccgagaaactgcaattggtgcgcggcgcc
cttccaccccagattccgccgccgatgctggcgccggtgacttccattatgggcgagatt
atgtttattgccttgacctccgatcggcacagcgcccttgagctcaagaccaaggcggac
tgggtattgcgccgccgcttgctggctgtcccgggagtagcccaggtgattcccatcggc
ggcgataccaaacaataccaggtgatcattcagccggaacgcttggctgcctacgatatt
gcggtagaccaagtggtggaggcgttacgaaagaccaatcagaatatttcggctgggttc
tatgtacagggggggcaagaatacctcattcatgggataggccgggtccagcgcctggaa
gatatccgcgaaacccttattacccagcgtggcgaccagccggtgctggtgcgccatgtg
gcagaagtggccctgggtccggcccccaagcggggtaccggcgcccataatggggaatca
gcagtgattattgggattcaaaagcaacccgacaccaataccttggcactgaccgcacgt
cttgatcaggttttggttgacatccaaacggctttgccgccgggaatgaccctcaaaacc
catattttccggcaggcggattttatcaccgtggctattgagaacttgttagaagccctg
cgggatggggccatcctggtggtggtcattgtgtttgcttttttgatgagcctccgggcc
agcgtgattaccttgctggccattcccttgtccctggtgacggccgttctcaccatgaag
gctctgggcgcgaacttcaataccatgactttggggggaatggccattgccctgggggcc
ctggtggacgacgcgattatcgtggtggaaaatattgtccgtcgtcttcgggaaaatcaa
ctgcgagaaaaggagcaacggcgctccctgggccgggtggtcttgtcagcaacccgggag
atccaaggttccattgtttttgccaccttgatcattatcttggtatttttgcctctgttt
tttctctctggggtggaaggccgcttgatgcagcctctagggttggcctacatcatttcc
ctgacggcttccctgttggttgccattaccgttacccctgtgctgagccttttgctgttg
cctcgggcacggattgttcaggctaaccaagaaacccggctcgtggggtaccttaaaagg
cactatgaacggtttcttaccgccaccgtaacccgttggaaaaccattgccctggtggca
ctcatcgccttaaccgctacgttaggggcccttgctggagtggggcaatcctttttgccg
ccttttaatgaaggtagtctcaccatcagcgcattgactttgccggggacctcattagcc
cagtccaatcgcttaggccaaagggtggaagaaattctgctccagcatccggaggtggtg
gccaccgcccgccgcaccggccgtgccgaactcgacccccatgcccaggccatctatgcc
tccgagattgatgtgagcttgagggggggagagcggagcaaagagacctttctcgccgac
ctgcgggcagatttagcggctatctccgggatgcaaatcaacattggtcagcccatttcc
caccgcatcgatcatatgctttcggggacgcgggccaatatcgcggtcaagatttttggg
cctgatctctatgaattgcgccggatggggcagcaggttaggactgtgatggaaggaata
cccggtgtggtggacctgactacggagcagcaggcggatattccctttctaacgattaaa
ttcaaacgccaagcgattgcccgccatggcctgcaggtgcaagaggtggcggaggcagtg
accacggctttctatggacagtcggtttctaaaattttagaggggcagtctagctttgat
ctggtggtgcgctatgacccgagagtcaaagccgatctggaggctgttcgggcggccttg
atcaccaccccgggcggtgcccgtctacctctccacgccctggcggagatccgcaaggat
cggggtcccaataccatcagccgggaaaatgtgcagcgcaagatggtggtcatggccaac
gtggcagaacgggatctagtgggcgtggtggaggaaatacaacaagaagttcagcaaagg
gttcctctgccggcaggttatcatattgagtacggtggtcagttcgagagcgcggaaacg
gcttcccgcactctgtccattctgggggtgttggtggttctcagcattttcctgttgctg
tttatggcatttcattcggcgcgggatgccagcttggtcatggtgaatctgcccttggcc
ctcatgggaggcgtgatcggcgtctatctgtccgggggaatactttccgtggcttccctg
attggttttattaccctatttgggattgcgacccgtaatggagtgatgatgattgcccat
atccatcacttggtggagaaagagggcgtgcgggagccccttaccgccgtcatccggggg
gccaaggaacgccttattcccattcttatgaccgctttgggcacagccctggccctaatt
cccttggcgttgagcgccggcgaaccgggaagcgaaatccaagcgcccatggctatggtg
atcctgttcggccttttgacttcaacaatgctcaacatggtggtggtgccagccctttat
ctgcgctttggggcggtgaggtcgcgattctatgcggaccattgcggcgtcctgcccgag
tag
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