KEGG   Nitrosococcus wardiae: E3U44_12645
Entry
E3U44_12645       CDS       T05933                                 
Symbol
cas8c
Name
(GenBank) type I-C CRISPR-associated protein Cas8c/Csd1
  KO
K19117  CRISPR-associated protein Csd1
Organism
nwr  Nitrosococcus wardiae
Brite
KEGG Orthology (KO) [BR:nwr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:nwr02048]
    E3U44_12645 (cas8c)
Prokaryotic defense system [BR:nwr02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    E3U44_12645 (cas8c)
SSDB
Motif
Pfam: Cas_Csd1
Other DBs
NCBI-ProteinID: QBQ55264
UniProt: A0A4P7C1D6
LinkDB
Position
2653049..2654797
AA seq 582 aa
MILQALSEYYQRKTREGSNELPPIGFEKKEIPFLIVLDEEGYFVDLEDTRTGKGKKKTGR
IFIVPQGEKRTSGILPNLLWDTLDYVLGTVSAVKAERLEANKREKEQQRAKEKRAAFIQR
IKDTFPEVGADKGIKAVLAFLEKGDFQSLYNHSLWDEINRSTGNLSFRLQNSTELICQRN
AVRRAIAEWVTERKKQRQRCLVSGEVDTIARVHPPIRGVRGAQPSGADIVSFNRDAFTSY
GKHQGINAPVGERVTFAYTTALNHLLRKGSRQRIQVGDASTVFWAAKDHPSEEQFVAWLD
PDPDDPDRGTEAIRALYAAPKSGAKPIDEDDTPFYVLGLAPNAARIAVRFWYPGTVGEVA
RHIRQHFDDTHIIHAPQEPEFLPLFRLLKASALQGKVENVPPNLAGDFMKAILVGMPYPR
TLLAAALRRVRAEHHITYPRVALIKAVLTRNARLFNHPQQEVNVALDLKNLNIGYRLGRL
FAVLERVQNLALPNVEATIRDRFYSAASSTPRTAFPHLLKLKNYHLDKLEEGQIIWLEKL
MGEIMDGIEYFPAHLSLDDQGRFTVGYYHQRQAFFNKKNLDN
NT seq 1749 nt   +upstreamnt  +downstreamnt
atgatcttgcaggcgctcagcgaatattaccagcgcaaaacccgtgagggtagtaatgaa
ctgcctccgatagggttcgagaagaaggagattcccttcctaattgtattggatgaagag
ggatatttcgtagatttagaagatacccgaacggggaagggaaaaaagaaaactgggcgg
atatttattgttcctcagggggagaagagaacttcagggattctgcctaatttattatgg
gatactctcgattatgtgttaggcacggttagtgctgtaaaagctgaaagacttgaggct
aacaagcgggaaaaggagcaacaacgggcaaaggaaaaacgggcggcatttatccaacgt
attaaagatacctttcccgaggtgggtgccgataaggggataaaggctgtattggccttt
ctggaaaagggcgattttcaatctttatataatcactctctttgggatgaaattaatagg
agcacgggtaacctctcctttcgcctgcaaaatagtacagaacttatctgccaacgaaat
gctgtgcggcgggctatcgccgagtgggtgacagagcgcaagaaacaacgccagcgttgt
ctggttagcggtgaggtggacaccatcgctcgagttcaccctcccatcagaggcgttcgg
ggggcacaaccttcgggtgcggatatcgtttctttcaatcgggatgctttcacgtcctac
ggtaagcaccaaggaattaatgcaccggtgggcgaacgggttacctttgcctacactacc
gctttgaatcatctactgcgcaaaggatcgcgccagcgaattcaggtaggggatgcttcc
actgtcttttgggcggcaaaggatcatccttcagaggagcaatttgtagcttggctggat
cccgacccagatgatccagatcggggcacagaggctattcgtgctctttatgccgcccct
aaaagcggggccaagccgattgatgaagatgatacccctttttatgtgctgggcctagcc
cccaacgccgcacgtatcgccgtccgcttctggtatccgggcaccgtgggcgaagtagcc
cggcatatacgccagcatttcgatgatacccatatcatccatgcaccccaggagccggaa
tttctgccgttattccgcttgctgaaggcaagcgctttacagggcaaagttgaaaatgtt
cctcctaatttggctggcgatttcatgaaggcgattctggtgggtatgccttatccgcga
accttgctagcggctgctcttcgccgggttagggcggagcaccatattacttatcctcga
gttgctttgattaaggcagtgttaacccgtaatgcccggttatttaatcatccccaacag
gaggtcaatgtggctttggatttgaaaaatttgaacatcggttatcggctaggacgattg
ttcgccgtgctagaacgagtccagaatctcgctctccccaacgttgaagccactatccgg
gatcgtttttacagtgccgcttcctcaacgcctaggacggcttttcctcatctgttaaag
cttaagaactaccacctcgataagttggaagagggacaaatcatttggttggaaaaattg
atgggtgaaatcatggacggcattgaatattttcctgcccatttgagtttggacgatcaa
ggccgctttactgtgggctattatcaccaacgccaagcatttttcaataaaaagaattta
gataactaa

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