Nitrosococcus wardiae: E3U44_12810
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Entry
E3U44_12810 CDS
T05933
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
nwr
Nitrosococcus wardiae
Brite
KEGG Orthology (KO) [BR:
nwr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nwr03400
]
E3U44_12810
Enzymes [BR:
nwr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E3U44_12810
DNA repair and recombination proteins [BR:
nwr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
E3U44_12810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QBQ55293
UniProt:
A0A4P7BYM9
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All DBs
Position
2690067..2692805
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AA seq
912 aa
AA seq
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MKTAQSLPLISEDDMFAALEAGALLLTINNRLAREFQDRYDFAQQSKGLAVWETPRIFPW
LAWLQHGYQSLTFTEPDNRNPTLLSPLQEQSLWERVIYDSSYSGALLQVPATARTAQEAW
QLWHAWCLPLQDQSLFVTEDTQAFLEWAQAFEHHCQVGHWLDHARLPGVVLQMLGTRQFP
LPATVIFAGFDEYTPQQQEFLAALAKQGVMLQALASQGRPERVMRVALVDGVEEITSAAH
WARGRLEDSPREKIGIIVPQLEFLRAQVVRIFDEIFHPEAVLPGREGIERAYNISLAQPL
VDNSLVHTALLVLELTKGELSLVEMGALLRSPFLGEAEREFSRRALLDAYLRKTREARVS
LERLFRAAVSEGMEGVVHRCPALSERLQQFKAELAQLPARQPPSGWARSFVRWLQLLGWP
GERSLNSEEQQAVSAWRKGIQSFASLDGVVPSLKQSTAIRKFRRFLADILFQPESSPVPV
QVMGILEAAGERFDGVWILGLHDGVWPPAPRPNPLLPVELQRHHRLPHASAERELAYARM
VTARLLACAPVVIVSHPCREGDSDLRLSPLIAELPSIPPEALELALVESYGHQIQRTAMG
ETLADSQGPPLARGTQVEGGTALLKAQAACPFRAFAEYRLGARGLEEPSVGLAALDQGIL
IHSALHYLWERLEDQQTLLTCTAEELQTLVAEAAKQAIAAQMAVRPQTFTERFTAIEQER
LEQLLLEWLEQDKQRDSFTVLHQEKSQPLKLGGIGLITRADRIDRLENGERVIIDYKTGR
PDPHHWFGERPEEPQLPLYCIAHREPVAAVLFAQVRRGEVKYLGVTKAAESVPEVSDFTR
VVEGPETWEGLLAQWSQVLHALAEEVMAGYAAVAPKDTKSCDYCALPGLCRIGELGGKIT
HNKNKNSGDGQL
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccgctcagtctcttcctttgattagcgaagatgatatgtttgcggcgttggag
gctggggcactcctgctgactattaataaccggctagcgcgggagtttcaagatcgctat
gattttgcccaacagtcgaaggggttagctgtctgggagacgccgcggatttttccttgg
ctcgcttggttacagcatggttatcagagtctgaccttcactgaacccgataaccgtaat
cctactcttcttagcccgctgcaggaacaaagtttatgggagcgggtgatctatgattcg
tcttatagtggagcactattgcaagttcctgcaaccgcccgcaccgcccaggaggcttgg
cagctttggcatgcctggtgcctaccgctgcaggaccagtctctttttgttacggaagat
actcaagctttcttagagtgggcccaggcctttgaacaccattgccaagtagggcattgg
ttggaccatgctcgtttgcctggagtggtgcttcaaatgctaggaactcggcagttcccc
ttgccggcaacggtcatcttcgcaggatttgatgaatatacgccccagcagcaggaattc
cttgctgcccttgccaagcagggggttatgctacaagcattggcttcccagggaaggccg
gaacgagtaatgcgcgtggcgttggttgatggggtagaggaaatcacatcggcagcccat
tgggctcgggggaggctggaagattcaccccgggagaagattggaatcattgttccccaa
ttggaatttctacgggcccaggtggtgcgcatttttgatgaaatctttcatcctgaagcc
gtattgccaggccgggaggggatagagcgggcctataatatttctttggctcagccttta
gtggataattcattggttcatacggccctattggttttagagcttaccaaaggtgaactt
tccttagtggagatgggagcgcttctgagatcaccttttttgggggaagctgagcgggaa
ttttctcgtcgtgccctattggatgcttatctccgcaagacccgggaggccagggtatct
ttggagcgtttattcagggccgccgtttcagaaggaatggagggcgttgtccatcgctgt
ccggccttgagtgagcggctccaacagtttaaagccgagctggctcagttgccggcaagg
caacctccgagtggttgggcccgaagctttgtccgctggcttcaattgctgggctggcca
ggagaacgctccctcaatagcgaagaacagcaggctgtttctgcctggcgcaaggggata
cagtcttttgccagtttggacggcgtggtgccatcgttgaagcaatcgacggccattaga
aaattccggcgtttcctcgccgatattctctttcaacctgaaagctctcccgtaccggta
caggtaatgggaattctggaagcagccggtgagcggtttgacggggtttggatactaggg
ctccatgacggggtttggcctccagcgcctcgccctaatccgttgttaccggtagagctg
caacgtcaccatcgtttgccccatgcctctgccgagcgggagttggcttatgcccggatg
gtaacggcgcgcttgcttgcctgcgcgcctgttgtgattgtcagccatccttgccgcgag
ggcgatagtgatctgcggctgagccccctaattgccgagttgccttctatcccccctgaa
gcgctggaactggctttagttgagtcctatgggcaccagatccagcgtacggctatgggg
gaaaccctggcggacagtcaagggccacccctggcaagggggacccaggtggaaggcggt
actgccttattgaaagcccaggcggcctgtcctttccgcgcctttgccgagtatcgtttg
ggcgccagagggcttgaagaacccagtgtaggcctagcggccttggaccaggggattttg
atccacagcgctttgcattatctctgggaacgcttagaagaccagcaaacactgttaacc
tgtactgccgaggaattacagacgctggtggcggaagcggcgaaacaagccattgccgcg
caaatggcagttcgcccccagacctttaccgagcggtttacggccatagagcaggagcgt
ttggagcagttattgctagagtggctggagcaagataagcagcgggattcttttacggta
ctgcatcaagaaaagtctcagcccttaaagcttggcgggatcggtttaattacccgggcg
gatcgcattgatcggttggaaaatggtgagcgggtgattatcgattataaaaccggacgg
cctgatccccaccattggtttggtgagcgccctgaggagccccagcttcctttatattgt
atcgctcacagggaaccggtggcggcagtattgtttgctcaagttcgtcgaggggaggtg
aaatatctgggcgtgactaaagcagcggagagtgtgccggaggtttctgattttactcgc
gttgttgaaggtccagaaacttgggaagggctactcgcccagtggtcacaggtcctccac
gcccttgccgaggaagtgatggcaggatatgcggctgtggcgccaaaggacactaagagt
tgcgattattgtgccttgcccggcttatgccggattggcgagttagggggcaaaatcact
cataataaaaacaagaatagcggtgatggtcaactctag
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