KEGG   Nitrosococcus wardiae: E3U44_13775
Entry
E3U44_13775       CDS       T05933                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
nwr  Nitrosococcus wardiae
Brite
KEGG Orthology (KO) [BR:nwr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:nwr02048]
    E3U44_13775
Enzymes [BR:nwr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     E3U44_13775
Prokaryotic defense system [BR:nwr02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   E3U44_13775
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N DUF559 T1RH-like_C ResIII T1R_D3-like MTES_1575 DEAD
Other DBs
NCBI-ProteinID: QBQ55455
UniProt: A0A4V1AW55
LinkDB
Position
complement(2893065..2896865)
AA seq 1266 aa
MPNFLSEDNIEQAMVQRLQHLYGYDVLDCYTSDAADLNDGSQRADKREVILRDRLKAAAV
RLNPEIPEAAIDDALDQVCDQRQAMATMVANRELDSLIRDGVRVEFKDSEGRNRKERVKL
IDFEAPENNHFLAVTQLWIQSTGAAAKAGYRRPDILLYINGLPLVFIELKNSNVKLRSAY
DDNLTNYKADIPQLFLTNVFCVFSNGLETRLGSLSAEWEHFFHWLRPEDEKEKIRREQIR
EQGTSSERFLQGLCAKDKLLDYVENFVIYHKGTQKIIAQNHQFLGVNRAFRVFVERRGWL
EQQKGLADKEPLTPALSQGEREKTGAHYRAGYDFSGLVTRARELRQRQTPAEDVLWQLLR
NRQFLGLKFRRQHQLGDFIADFYCDEHKLVVEVDGSIHATVEKTQHDRTRQLILEGQGFQ
VIQLSNELILNNPEAALESIAAKLPLPDESAADERTTPNKPQPQNRPSPSGRGAGGEGKT
PFKANRLGVFWHTQGSGKSFSMIFYARKIIRKVPGNYSFLVVTDRDDLDRQIYRNFLNTE
TVKKADAAQPKDSEQMRAFLGQNKKLVFTLIQKFRWPKGKRYPLLSDRDDIIVIVDEAHR
TQYKTLAENMRAGLPHAQYLAFTGTPLLGRERKTNDWFGDYVSEYSFSQSMDDGATVPLF
YKKRVPEVLNQNEELSDDFYEILEDENLDEAQQEKLERRFATELQVIKRDDRLETIARDL
VYHFPRRGYLGKGMLIAVDKFTAVKMYDKVQRLWKEDIKSLRGEIKKSVDEVHKARLQRQ
LDWMRKVEMAVVVSAENGEEEKFDAQGLDIRPHRKRMVQLDAHGHDLEYSYKDPEHPLQL
VFVCAMWLTGFDAPTVSTLYLDKPQKDHTLMQTIARANRVSSHRINGVEKTNGEIVDYYG
VIGRLRKAIKDYGQGDDGLDEPPVKDKEELFCLLADAIEQARLFCAEREIVIDAALAADD
VFKQVSLFEEWADTLLSKDEWRQSFKVLENTITALYEACKPEILGDPVVRKVALFQYLRG
VLDSIIQQQDIDPATKKINELLDESLIVDDQKFSQVKEESGGWKIEQKGQTWDLSKIDFD
KLKEDFKQAKYKNIEIADLRAFLEKKLQDMLNKNRTRRDFAERLQEIIDNYNAGSNSADS
DFTELVKFAESLKQEEDRHIREGLSEDELEIYDLLCKENMTKAEEKKVRLAARALLKRLT
EEKPKVLVQDWYKDSQTRLAVRDEVGAVLDEYLPEDSYDKELFLLKRDRVFELTLDLAIN
HQRWAA
NT seq 3801 nt   +upstreamnt  +downstreamnt
atgcctaacttcctgtctgaagacaacatcgaacaggccatggtgcagcgtttgcagcat
ctgtatggctacgatgtgctggattgctacaccagtgatgccgcggaccttaatgacggc
tcacagcgcgcggacaagcgcgaggtgattttgcgtgatcgtctgaaagccgcagcggtg
cgcctcaatccggagattcccgaagccgccattgacgatgcgctggaccaggtctgcgac
caacgccaggccatggccaccatggtggccaaccgcgagctggatagcctgatccgggat
ggtgtgcgggtcgagttcaaggacagtgagggtcgtaaccgcaaagagcgggtcaagctg
attgactttgaagcgccggagaataaccactttctcgcggtgactcagctatggattcaa
agtaccggcgcggcggccaaggcgggctatcggcggccggacattctgctgtatatcaat
gggctgccattagtgtttatcgagttgaagaactccaacgtcaagctgcgtagtgcctac
gacgacaacttgaccaattacaaggccgacattccacagttgttcctcaccaatgtgttt
tgtgtattcagtaacggcctggaaacacgcctgggcagcctgagtgccgagtgggagcac
tttttccattggctgcgcccggaagacgaaaaggaaaaaatacgtcgcgagcagattcgc
gagcagggcaccagtagcgagcgctttctgcagggcctgtgcgccaaagacaaactgctg
gactatgtggaaaactttgtcatttaccacaagggcacgcagaaaatcattgcccagaac
caccagttccttggcgttaatcgggctttcagggtatttgttgagcggcgagggtggctt
gaacagcagaagggtttagcagacaaggaacccctcaccccggccctctcccagggggag
agggagaaaacaggcgctcactatcgggcagggtatgacttttcgggtctggtaactcgt
gcccgggaactccgtcaacgacagacacctgctgaggacgttctatggcagttgctgaga
aaccggcaattcctcggcctgaaatttcgcagacagcatcagcttggagatttcattgcc
gatttctactgcgatgagcacaagctggttgttgaagtggacggcagtatccatgcaacg
gtagaaaaaacacagcatgacagaactcgtcaattgatactcgaagggcagggtttccag
gttatccaactctccaacgaattaatcctcaataatcccgaagcagcgcttgaatcaatc
gccgcaaagctcccccttcctgatgaaagcgcggccgacgagcgcacgacgccgaacaaa
ccccaaccgcaaaaccgcccctctccctctgggagaggggctgggggtgagggtaagacg
ccgttcaaggccaacaggctgggcgtcttttggcatacccagggctcgggcaagagtttt
tcgatgatcttctacgcgcgcaagatcatccgcaaggtgccgggcaattacagctttttg
gtggtgaccgaccgcgacgacctcgaccggcagatttatcgcaacttcctcaataccgaa
accgtcaagaaggccgatgccgcccagcccaaagacagcgaacaaatgcgcgcctttctc
ggccagaacaagaaactggtgtttaccctgattcagaaattccgctggcccaagggcaag
cgctacccgctgctgtcggatcgcgacgacattattgtgattgtggatgaggcacaccgg
acccagtacaagaccctggccgagaacatgcgcgccggcctgccccatgcccagtacctg
gcctttaccggcacgcccctgctggggcgcgagcgcaagaccaacgactggtttggtgat
tatgtatcggaatacagcttcagccagtccatggacgatggcgccactgtgccgctgttc
tacaaaaaacgcgtgccggaggtcttgaaccagaacgaggaactaagcgacgatttttac
gagattctggaggacgaaaacctcgacgaagcgcagcaggaaaagctggagcgtcgtttt
gccacggaactgcaagtgatcaaacgcgatgaccggctggagaccatcgcccgggatctg
gtctaccacttcccgcgccgtggttatcttggcaagggcatgctgatcgccgtggacaag
ttcaccgccgtgaagatgtacgacaaggtacaacggctgtggaaagaggacatcaaatcg
ctgcgcggcgagatcaagaaaagcgtagacgaggtgcacaaggcgcgcttgcagaggcag
ctcgactggatgcgcaaggtggaaatggcggtggtggtcagtgccgagaacggcgaggaa
gaaaaattcgacgcccagggcctggacatccgcccgcatcgcaaacgcatggttcaactg
gacgcccacggccacgatctggaatacagctacaaagacccggagcacccgctgcaactg
gtgttcgtgtgcgccatgtggctgaccggatttgatgcgccgacagtctcaacgctctac
ctcgataagccacagaaagaccacacactgatgcagaccatcgcccgtgccaaccgggtg
agctcgcatcgcatcaacggtgtggagaagaccaacggcgaaatcgtcgattattacggc
gtcatcggccgcctcaggaaagcaattaaggattacggccagggtgacgacgggctagat
gaaccaccagtcaaggataaggaggaactgttttgcttgctggccgatgccattgagcag
gcgcgcctcttctgtgccgagcgcgagattgttatcgacgcggcactggcagcagacgat
gtgttcaagcaggtcagcctgtttgaagaatgggcagacaccttgctctcgaaagatgaa
tggcggcaatccttcaaggtgttagagaatactattaccgcgctttatgaagcctgcaag
ccggagattctgggtgatccagtcgtgcgcaaggtggctttatttcaatatctacgcggc
gtgcttgacagcattattcagcagcaggacattgatcctgctaccaaaaaaattaacgag
ttgctcgatgaaagcctgattgtggatgatcagaaattcagccaggtcaaagaggagtcg
ggcggatggaagattgaacagaaaggccagacatgggatctgagcaaaatcgacttcgac
aaactgaaagaagacttcaaacaggccaagtacaaaaacatcgaaattgccgacttgcgc
gcctttctggaaaagaaactgcaggacatgctcaataaaaaccgcacccgacgagatttt
gccgaacggctacaggaaatcatcgacaactataacgcgggcagtaattcggcggacagt
gactttaccgagctggttaaattcgccgaatcactcaagcaagaagaagatcgacatatc
cgtgaaggcttgagcgaggacgagctggaaatctacgatttgttatgtaaggaaaacatg
accaaggcggaggaaaagaaagtgcgtttggcagccagagccttattgaaacgcctgacc
gaagaaaagccaaaagtgttggtgcaggactggtacaaagacagccagacacggcttgct
gtgcgtgatgaagtgggtgcggtactggatgagtaccttcccgaagacagctatgacaaa
gagctgtttttactcaagcgtgacagggtgtttgagctgacgcttgatctggcgatcaac
caccagcgctgggcggcatag

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