KEGG   Nitrosococcus wardiae: E3U44_17835
Entry
E3U44_17835       CDS       T05933                                 
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
nwr  Nitrosococcus wardiae
Pathway
nwr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:nwr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    E3U44_17835 (pcnB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nwr03019]
    E3U44_17835 (pcnB)
Enzymes [BR:nwr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     E3U44_17835 (pcnB)
Messenger RNA biogenesis [BR:nwr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     E3U44_17835 (pcnB)
SSDB
Motif
Pfam: PolyA_pol_arg_C PolyA_pol PolyA_pol_RNAbd
Other DBs
NCBI-ProteinID: QBQ56155
UniProt: A0A4V1AWC5
LinkDB
Position
complement(3784850..3786115)
AA seq 421 aa
MPRSEHVISRANISEPALNVLYRLKKAGFSAYLVGGCVRDLLLGHEPKDFDVTTDARPEQ
IRDLFRSCRLVGRRFRLAHVRFGRDIIEVATFRGPPGKGLSENGRIVSDNVYGTLEQDAW
RRDFSVNALYYNIRDFSVVDYTGGMKDLKAGRLRLIGDPVTRYREDPVRMLRAVRFAAKL
GFTFHPESEKPIWELAPSLQEIPSARLFEEVLKLFLGGCAVQTFELLRHFHLFQWLFPQT
EACLAEEEKGFPRIFLVQALSNTDVRIEEGKPVTPAFLFAALLWEPTRKLTERYQQEGIP
GAQAMRNAAEVVLANQAVHVALPRRFSLPMREIWYLQPRFAYRRGKRPLRLLQHPRFRAA
YDFLLLRAQSGEELAELCQWWTKIQEMGEKERLRYVKIVTKSRHRRKPRKRVGKSATPTE
A
NT seq 1266 nt   +upstreamnt  +downstreamnt
attcctcgttctgagcatgtgatctcgcgcgccaatattagcgagcctgctctcaatgtg
ttatatcgtttgaaaaaagcaggctttagcgcctatttggttggaggttgcgtgcgcgat
ctgttgcttggccatgaacccaaggatttcgacgtaaccacagatgctaggccagagcaa
atccgagatctattccgcagttgtcggctggttggacgccggttccgtttagcccatgtc
cgctttggacgggatattattgaggtggctacttttcgcggccctccagggaaagggttg
agtgagaatgggcgtatcgtgagcgataatgtttacggaactctggaacaggatgcctgg
cggagggatttctcggttaacgctttatactacaacatcagggatttctctgtggtggat
tacacagggggtatgaaggaccttaaagccggtcgattgcgcttgatcggtgatccggtg
actcgttaccgggaagatccggtgcggatgttaagagcagttcggtttgccgctaagttg
ggctttaccttccaccctgaaagcgagaagcccatttgggaacttgccccttccctgcaa
gagataccttcggcgaggttatttgaagaagtattgaaactatttcttggaggttgcgct
gtacagactttcgagttacttcgccattttcatttgttccaatggttatttccgcaaact
gaggcctgtttagctgaagaggaaaagggttttcctcgaatttttttagttcaggcgctg
agcaacacggatgttcgaattgaagagggtaagccggtgacacccgcatttttatttgcg
gctttactatgggaacctacccgaaagctcaccgagcgctatcagcaagaagggattccg
ggggctcaagcgatgcgcaacgcagcggaagttgtgttagccaatcaggccgtccatgtg
gctttgccccggcggttttcgttgcccatgcgcgagatctggtatttgcagccgcgcttt
gcttatcgacggggtaagcgacccttgcgcctactgcaacacccacgctttcgggctgcc
tatgatttcctcttgttgcgggcacagtcgggtgaagagctggcagagctttgtcaatgg
tggactaaaattcaagagatgggggaaaaggaacgtttgcgctatgttaagattgtgaca
aagtcccgccatcgccggaagccgaggaagcgtgtgggtaagtctgcgaccccaacggag
gcttaa

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