Nitrosococcus wardiae: E3U44_17875
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Entry
E3U44_17875 CDS
T05933
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
nwr
Nitrosococcus wardiae
Pathway
nwr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nwr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E3U44_17875 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwr03019
]
E3U44_17875 (groL)
03110 Chaperones and folding catalysts [BR:
nwr03110
]
E3U44_17875 (groL)
03029 Mitochondrial biogenesis [BR:
nwr03029
]
E3U44_17875 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nwr04147
]
E3U44_17875 (groL)
Enzymes [BR:
nwr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
E3U44_17875 (groL)
Messenger RNA biogenesis [BR:
nwr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
E3U44_17875 (groL)
Chaperones and folding catalysts [BR:
nwr03110
]
Heat shock proteins
HSP60 / Chaperonin
E3U44_17875 (groL)
Mitochondrial biogenesis [BR:
nwr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
E3U44_17875 (groL)
Exosome [BR:
nwr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
E3U44_17875 (groL)
Exosomal proteins of other body fluids (saliva and urine)
E3U44_17875 (groL)
Exosomal proteins of breast cancer cells
E3U44_17875 (groL)
Exosomal proteins of colorectal cancer cells
E3U44_17875 (groL)
Exosomal proteins of bladder cancer cells
E3U44_17875 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QBQ56161
UniProt:
A0A4P7C1A9
LinkDB
All DBs
Position
3792244..3793872
Genome browser
AA seq
542 aa
AA seq
DB search
MAAKMIDFGEDARHRLLHGVNVLANAVKVTLGPKGRNVVLEKAFGAPTITKDGVTVAKEV
ELKGKFENMGAQMVKEVASKTADVAGDGTTTATVLAQSLLREGLKSVAAGIDPMNIKRGI
DKAVEAAAAELKKLSKPCEDSKAIAQVGTISANADESVGKILANAMEKVGKDGVITVEEG
SGLENELEVVEGMQFDRGYLSPYFINHKQNMSVELEDPYILLHDKKISNIRDLLPVLEAV
AKSGKSLLIISEDIEGEALATLVVNTIRGILKVAAVKAPGFGDRRKAMLEDIAVLTGGTV
IAEELGLSLEKATLDDLGNAKKVQITKEDTTIVSGAGKKDNIAGRVAQIRKQIEETTSDY
DREKLEERLAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALI
RALKGIKDLKGDNRAQEVGINIARRAMEEPLRQIISNAGGEASIILAKVAEGKDNFGYNA
ATDKFGDMIEMGILDPTKVTRSALQNAASIAGLMITTEAMVAELPKKEKAGAGMPGGEME
EF
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaagatgattgatttcggtgaggatgcgcgccatcgtctactgcatggcgtc
aatgttcttgctaatgcggtcaaagtaaccctaggccccaagggacgcaacgtggtactg
gaaaaagcttttggcgcgcctaccatcacgaaggatggcgttactgtagccaaagaagtt
gagcttaaaggtaaatttgaaaacatgggcgcccagatggtcaaggaagtggcctccaaa
actgctgatgtggcgggtgacggcaccactaccgctaccgtcttggcgcaatccctactc
cgcgaagggttgaaatccgtagcggcaggaatcgaccccatgaacattaaacggggtatc
gacaaagcggtggaagcagcggcagcagaattaaaaaagctttctaaaccttgcgaagac
agcaaagccattgcccaagtgggcacgatttccgccaatgctgatgaatctgtaggcaaa
atccttgccaatgccatggaaaaagtaggcaaagatggggtcatcaccgtggaagaaggc
tccggcctggaaaatgagctggaggtggtggaagggatgcaatttgatcggggctatctc
tccccctactttatcaaccacaagcaaaacatgagcgtcgagctggaagatccctacatc
ttgttgcacgacaagaaaatttccaatatccgcgatctgctccctgttctcgaagccgta
gccaagtcgggtaaatcactgctgatcatctctgaggatatagagggggaggccctagca
acgctggtggtgaataccatccgcggtattctcaaggtagcggcagtcaaagcaccgggt
tttggggatcggcgcaaagccatgttagaggatattgccgtcctgaccggaggaaccgtt
atcgccgaagaattgggccttagcttagaaaaggccaccctggatgacttgggcaacgcc
aaaaaagtccagatcactaaggaagatacgaccattgttagcggtgcgggcaagaaagac
aacatcgctggccgggtggcccagatccgcaaacagatagaagagaccacctcagactat
gaccgggagaagctggaagagcgcctagccaaactggctggtggggtggcggtaattaag
gtgggcgccgcgaccgaagttgaaatgaaggaaaagaaagcccgcgttgaggatgccctg
catgctacccgggcagccgtagaagaaggtgttgtccctggtggaggtgttgccctcatt
cgagcgttaaagggtatcaaagacctaaaaggtgacaaccgtgcccaagaggtgggaatc
aatattgcccgccgcgccatggaagagcccctgcggcaaattatttctaatgccggtggg
gaagcttccattatcctggcaaaggtcgccgagggcaaggataactttggctacaacgca
gccaccgataagtttggcgatatgatcgaaatgggtatcctggaccctaccaaagtcacc
cgttccgccttgcaaaacgccgcctccattgccggtttaatgattaccaccgaagccatg
gtggcagaactgcctaagaaggaaaaagccggagcaggtatgcctggaggtgaaatggaa
gaattttaa
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